SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSG00000108788.7 | MAX dimerization protein MLX | |
ENSG00000105698.11 | upstream transcription factor 2, c-fos interacting | |
ENSG00000158773.10 | upstream transcription factor 1 | |
ENSG00000075891.17 | paired box 2 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
PAX2 | hg19_v2_chr10_+_102505468_102505546 | -0.82 | 1.0e-05 | Click! |
USF2 | hg19_v2_chr19_+_35759824_35759891 | -0.60 | 5.1e-03 | Click! |
USF1 | hg19_v2_chr1_-_161015663_161015694 | 0.55 | 1.3e-02 | Click! |
MLX | hg19_v2_chr17_+_40719073_40719092 | 0.24 | 3.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_+_154193643 Show fit | 15.12 |
ENST00000456325.1
|
ubiquitin associated protein 2-like |
|
chr1_+_154193325 Show fit | 14.09 |
ENST00000428931.1
ENST00000441890.1 ENST00000271877.7 ENST00000412596.1 ENST00000368504.1 ENST00000437652.1 |
ubiquitin associated protein 2-like |
|
chr5_-_132299290 Show fit | 9.76 |
ENST00000378595.3
|
AF4/FMR2 family, member 4 |
|
chr13_+_113951607 Show fit | 8.32 |
ENST00000397181.3
|
lysosomal-associated membrane protein 1 |
|
chr1_-_113498616 Show fit | 7.86 |
ENST00000433570.4
ENST00000538576.1 ENST00000458229.1 |
solute carrier family 16 (monocarboxylate transporter), member 1 |
|
chr11_-_85779971 Show fit | 7.46 |
ENST00000393346.3
|
phosphatidylinositol binding clathrin assembly protein |
|
chr4_-_99850243 Show fit | 6.86 |
ENST00000280892.6
ENST00000511644.1 ENST00000504432.1 ENST00000505992.1 |
eukaryotic translation initiation factor 4E |
|
chr11_-_85779786 Show fit | 6.34 |
ENST00000356360.5
|
phosphatidylinositol binding clathrin assembly protein |
|
chr11_+_18343800 Show fit | 6.20 |
ENST00000453096.2
|
general transcription factor IIH, polypeptide 1, 62kDa |
|
chr13_+_113951532 Show fit | 5.73 |
ENST00000332556.4
|
lysosomal-associated membrane protein 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.3 | 29.8 | GO:0061484 | hematopoietic stem cell homeostasis(GO:0061484) |
0.1 | 20.3 | GO:0006368 | transcription elongation from RNA polymerase II promoter(GO:0006368) |
2.8 | 19.5 | GO:1902963 | regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process(GO:1902962) negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process(GO:1902963) |
3.0 | 18.1 | GO:0008626 | granzyme-mediated apoptotic signaling pathway(GO:0008626) |
1.2 | 13.8 | GO:0090204 | protein localization to nuclear pore(GO:0090204) |
4.1 | 12.4 | GO:0015728 | mevalonate transport(GO:0015728) behavioral response to nutrient(GO:0051780) |
0.6 | 11.9 | GO:0010510 | regulation of acetyl-CoA biosynthetic process from pyruvate(GO:0010510) |
0.5 | 11.8 | GO:0070816 | phosphorylation of RNA polymerase II C-terminal domain(GO:0070816) |
1.1 | 11.0 | GO:1903764 | regulation of potassium ion export across plasma membrane(GO:1903764) |
0.7 | 10.8 | GO:0002191 | cap-dependent translational initiation(GO:0002191) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.5 | 34.9 | GO:0005671 | Ada2/Gcn5/Ada3 transcription activator complex(GO:0005671) |
3.1 | 18.8 | GO:0070381 | endosome to plasma membrane transport vesicle(GO:0070381) |
0.7 | 18.5 | GO:0016281 | eukaryotic translation initiation factor 4F complex(GO:0016281) |
0.4 | 17.3 | GO:0044665 | MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339) |
1.6 | 14.1 | GO:0044194 | cytolytic granule(GO:0044194) |
0.5 | 13.4 | GO:0035327 | transcriptionally active chromatin(GO:0035327) |
1.0 | 11.4 | GO:0000439 | core TFIIH complex(GO:0000439) |
0.7 | 11.0 | GO:0097025 | MPP7-DLG1-LIN7 complex(GO:0097025) |
0.0 | 10.3 | GO:0001650 | fibrillar center(GO:0001650) |
0.1 | 9.8 | GO:0016605 | PML body(GO:0016605) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 28.5 | GO:0045296 | cadherin binding(GO:0045296) |
0.0 | 27.8 | GO:0004842 | ubiquitin-protein transferase activity(GO:0004842) |
1.3 | 18.8 | GO:0032050 | clathrin heavy chain binding(GO:0032050) |
0.1 | 18.0 | GO:0001618 | virus receptor activity(GO:0001618) |
0.6 | 15.0 | GO:0008353 | RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353) |
0.0 | 14.6 | GO:0015631 | tubulin binding(GO:0015631) |
0.3 | 14.4 | GO:0070273 | phosphatidylinositol-4-phosphate binding(GO:0070273) |
4.1 | 12.4 | GO:0015130 | mevalonate transmembrane transporter activity(GO:0015130) |
1.7 | 11.8 | GO:0004741 | [pyruvate dehydrogenase (lipoamide)] phosphatase activity(GO:0004741) |
0.1 | 11.4 | GO:0047485 | protein N-terminus binding(GO:0047485) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 14.8 | PID LKB1 PATHWAY | LKB1 signaling events |
0.2 | 12.7 | ST ERK1 ERK2 MAPK PATHWAY | ERK1/ERK2 MAPK Pathway |
0.1 | 12.0 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
0.1 | 9.8 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.1 | 8.2 | PID MYC PATHWAY | C-MYC pathway |
0.1 | 6.4 | PID MTOR 4PATHWAY | mTOR signaling pathway |
0.1 | 6.1 | PID CDC42 PATHWAY | CDC42 signaling events |
0.1 | 5.9 | PID INTEGRIN CS PATHWAY | Integrin family cell surface interactions |
0.1 | 5.6 | PID ERBB4 PATHWAY | ErbB4 signaling events |
0.1 | 5.5 | PID AURORA B PATHWAY | Aurora B signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 24.2 | REACTOME PYRUVATE METABOLISM | Genes involved in Pyruvate metabolism |
0.7 | 17.5 | REACTOME MTORC1 MEDIATED SIGNALLING | Genes involved in mTORC1-mediated signalling |
0.1 | 15.7 | REACTOME APOPTOTIC CLEAVAGE OF CELLULAR PROTEINS | Genes involved in Apoptotic cleavage of cellular proteins |
0.4 | 12.3 | REACTOME FORMATION OF INCISION COMPLEX IN GG NER | Genes involved in Formation of incision complex in GG-NER |
0.4 | 10.6 | REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS | Genes involved in Ionotropic activity of Kainate Receptors |
0.1 | 10.3 | REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS | Genes involved in Golgi Associated Vesicle Biogenesis |
0.2 | 7.1 | REACTOME CITRIC ACID CYCLE TCA CYCLE | Genes involved in Citric acid cycle (TCA cycle) |
0.3 | 6.8 | REACTOME VITAMIN B5 PANTOTHENATE METABOLISM | Genes involved in Vitamin B5 (pantothenate) metabolism |
0.2 | 6.7 | REACTOME INSULIN RECEPTOR RECYCLING | Genes involved in Insulin receptor recycling |
0.2 | 6.3 | REACTOME G0 AND EARLY G1 | Genes involved in G0 and Early G1 |