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SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for RARB

Z-value: 0.45

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Transcription factors associated with RARB

Gene Symbol Gene ID Gene Info
RARB
ENSG00000077092.14 retinoic acid receptor beta

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
RARBhg19_v2_chr3_+_25469724_254697730.861.1e-06Click!

Activity profile of RARB motif

Sorted Z-values of RARB motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr16_-_46649905 0.97 ENST00000569702.1
SHCBP1
SHC SH2-domain binding protein 1
chr17_-_41277370 0.89 ENST00000476777.1
ENST00000491747.2
ENST00000478531.1
ENST00000477152.1
ENST00000357654.3
ENST00000493795.1
ENST00000493919.1
BRCA1
breast cancer 1, early onset
chr6_+_49431073 0.76 ENST00000335783.3
CENPQ
centromere protein Q
chr9_+_104296163 0.73 ENST00000374819.2
ENST00000479306.1
RNF20
ring finger protein 20, E3 ubiquitin protein ligase
chr17_-_41277317 0.71 ENST00000497488.1
ENST00000489037.1
ENST00000470026.1
ENST00000586385.1
ENST00000591534.1
ENST00000591849.1
BRCA1
breast cancer 1, early onset
chrX_-_119709637 0.58 ENST00000404115.3
CUL4B
cullin 4B
chr17_+_78518617 0.57 ENST00000537330.1
ENST00000570891.1
RPTOR
regulatory associated protein of MTOR, complex 1
chr1_+_28836561 0.57 ENST00000419074.1
RCC1
regulator of chromosome condensation 1
chr14_-_39572345 0.56 ENST00000548032.2
ENST00000556092.1
ENST00000557280.1
ENST00000545328.2
ENST00000553970.1
SEC23A
Sec23 homolog A (S. cerevisiae)
chr9_+_104296243 0.56 ENST00000466817.1
RNF20
ring finger protein 20, E3 ubiquitin protein ligase
chr15_+_29211570 0.56 ENST00000558804.1
APBA2
amyloid beta (A4) precursor protein-binding, family A, member 2
chr22_-_43398442 0.55 ENST00000422336.1
PACSIN2
protein kinase C and casein kinase substrate in neurons 2
chr18_-_74839891 0.55 ENST00000581878.1
MBP
myelin basic protein
chr11_+_125461607 0.51 ENST00000527606.1
STT3A
STT3A, subunit of the oligosaccharyltransferase complex (catalytic)
chrX_+_102024075 0.51 ENST00000431616.1
ENST00000440496.1
ENST00000420471.1
ENST00000435966.1
LINC00630
long intergenic non-protein coding RNA 630
chr18_+_657578 0.51 ENST00000323274.10
TYMS
thymidylate synthetase
chr1_-_23520755 0.49 ENST00000314113.3
HTR1D
5-hydroxytryptamine (serotonin) receptor 1D, G protein-coupled
chr9_+_131217459 0.44 ENST00000497812.2
ENST00000393533.2
ODF2
outer dense fiber of sperm tails 2
chr4_-_6557336 0.44 ENST00000507294.1
PPP2R2C
protein phosphatase 2, regulatory subunit B, gamma
chr9_+_67977438 0.44 ENST00000456982.1
RP11-195B21.3
Protein LOC644249
chr8_-_95274536 0.44 ENST00000297596.2
ENST00000396194.2
GEM
GTP binding protein overexpressed in skeletal muscle
chr17_-_79533608 0.43 ENST00000572760.1
ENST00000573876.1
NPLOC4
nuclear protein localization 4 homolog (S. cerevisiae)
chr11_-_122931881 0.42 ENST00000526110.1
ENST00000227378.3
HSPA8
heat shock 70kDa protein 8
chr12_+_49658855 0.42 ENST00000549183.1
TUBA1C
tubulin, alpha 1c
chr13_+_73302047 0.41 ENST00000377814.2
ENST00000377815.3
ENST00000390667.5
BORA
bora, aurora kinase A activator
chr6_-_49430886 0.41 ENST00000274813.3
MUT
methylmalonyl CoA mutase
chr10_-_81203972 0.41 ENST00000372333.3
ZCCHC24
zinc finger, CCHC domain containing 24
chr1_+_35544968 0.41 ENST00000359858.4
ENST00000373330.1
ZMYM1
zinc finger, MYM-type 1
chr12_+_57854274 0.41 ENST00000528432.1
GLI1
GLI family zinc finger 1
chr1_-_53019059 0.40 ENST00000484723.2
ENST00000524582.1
ZCCHC11
zinc finger, CCHC domain containing 11
chr3_-_121448791 0.39 ENST00000489400.1
GOLGB1
golgin B1
chr12_-_120241187 0.39 ENST00000392520.2
CIT
citron (rho-interacting, serine/threonine kinase 21)
chr9_+_104296122 0.38 ENST00000389120.3
RNF20
ring finger protein 20, E3 ubiquitin protein ligase
chr11_+_121447469 0.37 ENST00000532694.1
ENST00000534286.1
SORL1
sortilin-related receptor, L(DLR class) A repeats containing
chr10_-_33625154 0.36 ENST00000265371.4
NRP1
neuropilin 1
chr10_-_65028817 0.36 ENST00000542921.1
JMJD1C
jumonji domain containing 1C
chr8_+_48873453 0.34 ENST00000523944.1
MCM4
minichromosome maintenance complex component 4
chr5_-_141392538 0.34 ENST00000503794.1
ENST00000510194.1
ENST00000504424.1
ENST00000513454.1
ENST00000458112.2
ENST00000542860.1
ENST00000503229.1
ENST00000500692.2
ENST00000311337.6
ENST00000504139.1
ENST00000505689.1
GNPDA1
glucosamine-6-phosphate deaminase 1
chrX_+_23682379 0.32 ENST00000379349.1
PRDX4
peroxiredoxin 4
chr4_+_128802016 0.31 ENST00000270861.5
ENST00000515069.1
ENST00000513090.1
ENST00000507249.1
PLK4
polo-like kinase 4
chr10_-_65028938 0.31 ENST00000402544.1
JMJD1C
jumonji domain containing 1C
chr3_+_99986036 0.31 ENST00000471098.1
TBC1D23
TBC1 domain family, member 23
chr5_-_74162605 0.31 ENST00000389156.4
ENST00000510496.1
ENST00000380515.3
FAM169A
family with sequence similarity 169, member A
chr3_+_127317066 0.30 ENST00000265056.7
MCM2
minichromosome maintenance complex component 2
chr17_-_79900255 0.30 ENST00000330655.3
ENST00000582198.1
MYADML2
PYCR1
myeloid-associated differentiation marker-like 2
pyrroline-5-carboxylate reductase 1
chrX_+_123095890 0.30 ENST00000435215.1
STAG2
stromal antigen 2
chr1_+_78245303 0.29 ENST00000370791.3
ENST00000443751.2
FAM73A
family with sequence similarity 73, member A
chr14_+_89290965 0.29 ENST00000345383.5
ENST00000536576.1
ENST00000346301.4
ENST00000338104.6
ENST00000354441.6
ENST00000380656.2
ENST00000556651.1
ENST00000554686.1
TTC8
tetratricopeptide repeat domain 8
chr11_+_95523621 0.28 ENST00000325542.5
ENST00000325486.5
ENST00000544522.1
ENST00000541365.1
CEP57
centrosomal protein 57kDa
chr12_+_93963590 0.28 ENST00000340600.2
SOCS2
suppressor of cytokine signaling 2
chr17_+_8316442 0.28 ENST00000582812.1
NDEL1
nudE neurodevelopment protein 1-like 1
chr21_-_35284635 0.27 ENST00000429238.1
AP000304.12
AP000304.12
chr17_-_28619059 0.27 ENST00000580709.1
BLMH
bleomycin hydrolase
chr11_-_63381823 0.27 ENST00000323646.5
PLA2G16
phospholipase A2, group XVI
chr7_-_107204706 0.27 ENST00000393603.2
COG5
component of oligomeric golgi complex 5
chr8_-_141774467 0.27 ENST00000520151.1
ENST00000519024.1
ENST00000519465.1
PTK2
protein tyrosine kinase 2
chr1_-_23521222 0.26 ENST00000374619.1
HTR1D
5-hydroxytryptamine (serotonin) receptor 1D, G protein-coupled
chr14_-_80697396 0.26 ENST00000557010.1
DIO2
deiodinase, iodothyronine, type II
chr12_-_112443767 0.26 ENST00000550233.1
ENST00000546962.1
ENST00000550800.2
TMEM116
transmembrane protein 116
chr12_-_112443830 0.25 ENST00000550037.1
ENST00000549425.1
TMEM116
transmembrane protein 116
chr2_+_29117509 0.25 ENST00000407426.3
WDR43
WD repeat domain 43
chr9_-_125590818 0.25 ENST00000259467.4
PDCL
phosducin-like
chr16_+_68877496 0.24 ENST00000261778.1
TANGO6
transport and golgi organization 6 homolog (Drosophila)
chr5_+_70883154 0.24 ENST00000509358.2
MCCC2
methylcrotonoyl-CoA carboxylase 2 (beta)
chr8_+_8860314 0.24 ENST00000250263.7
ENST00000519292.1
ERI1
exoribonuclease 1
chr10_+_6779326 0.24 ENST00000417112.1
RP11-554I8.2
RP11-554I8.2
chr9_-_104145795 0.24 ENST00000259407.2
BAAT
bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)
chr5_+_27472371 0.24 ENST00000512067.1
ENST00000510165.1
ENST00000505775.1
ENST00000514844.1
ENST00000503107.1
LINC01021
long intergenic non-protein coding RNA 1021
chr7_-_98805129 0.23 ENST00000327442.6
KPNA7
karyopherin alpha 7 (importin alpha 8)
chr4_+_56719782 0.23 ENST00000381295.2
ENST00000346134.7
ENST00000349598.6
EXOC1
exocyst complex component 1
chr8_-_23315131 0.22 ENST00000518718.1
ENTPD4
ectonucleoside triphosphate diphosphohydrolase 4
chr2_-_25194476 0.22 ENST00000534855.1
DNAJC27
DnaJ (Hsp40) homolog, subfamily C, member 27
chr19_+_13228917 0.22 ENST00000586171.1
NACC1
nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
chr5_-_74162739 0.21 ENST00000513277.1
FAM169A
family with sequence similarity 169, member A
chr2_-_175499294 0.21 ENST00000392547.2
WIPF1
WAS/WASL interacting protein family, member 1
chr11_-_63381925 0.21 ENST00000415826.1
PLA2G16
phospholipase A2, group XVI
chr1_+_66258846 0.21 ENST00000341517.4
PDE4B
phosphodiesterase 4B, cAMP-specific
chrX_+_123095860 0.21 ENST00000428941.1
STAG2
stromal antigen 2
chr1_-_224624730 0.20 ENST00000445239.1
WDR26
WD repeat domain 26
chr20_+_43990576 0.20 ENST00000372727.1
ENST00000414310.1
SYS1
SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
chr4_-_141075330 0.20 ENST00000509479.2
MAML3
mastermind-like 3 (Drosophila)
chr2_-_3521518 0.20 ENST00000382093.5
ADI1
acireductone dioxygenase 1
chr7_-_107204918 0.19 ENST00000297135.3
COG5
component of oligomeric golgi complex 5
chr2_-_107084826 0.19 ENST00000304514.7
ENST00000409886.3
RGPD3
RANBP2-like and GRIP domain containing 3
chr17_-_46178527 0.19 ENST00000393408.3
CBX1
chromobox homolog 1
chr15_-_54051831 0.19 ENST00000557913.1
ENST00000360509.5
WDR72
WD repeat domain 72
chr1_+_160175166 0.19 ENST00000368077.1
PEA15
phosphoprotein enriched in astrocytes 15
chr16_-_69390209 0.19 ENST00000563634.1
RP11-343C2.9
Uncharacterized protein
chr13_-_30881134 0.19 ENST00000380617.3
ENST00000441394.1
KATNAL1
katanin p60 subunit A-like 1
chr11_+_65029233 0.18 ENST00000265465.3
POLA2
polymerase (DNA directed), alpha 2, accessory subunit
chr17_-_46178741 0.18 ENST00000581003.1
ENST00000225603.4
CBX1
chromobox homolog 1
chr12_+_104682496 0.18 ENST00000378070.4
TXNRD1
thioredoxin reductase 1
chr6_+_24495067 0.18 ENST00000357578.3
ENST00000546278.1
ENST00000491546.1
ALDH5A1
aldehyde dehydrogenase 5 family, member A1
chr6_+_2988199 0.18 ENST00000450238.1
ENST00000445000.1
ENST00000426637.1
LINC01011
NQO2
long intergenic non-protein coding RNA 1011
NAD(P)H dehydrogenase, quinone 2
chr14_+_62164340 0.18 ENST00000557538.1
ENST00000539097.1
HIF1A
hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
chr10_-_27389320 0.18 ENST00000436985.2
ANKRD26
ankyrin repeat domain 26
chr6_+_76311636 0.18 ENST00000327284.8
SENP6
SUMO1/sentrin specific peptidase 6
chr12_-_109221160 0.18 ENST00000326470.5
SSH1
slingshot protein phosphatase 1
chr2_-_176866978 0.18 ENST00000392540.2
ENST00000409660.1
ENST00000544803.1
ENST00000272748.4
KIAA1715
KIAA1715
chr13_+_111893533 0.17 ENST00000478679.1
ARHGEF7
Rho guanine nucleotide exchange factor (GEF) 7
chr12_-_323689 0.17 ENST00000428720.1
SLC6A12
solute carrier family 6 (neurotransmitter transporter), member 12
chr10_+_11784360 0.17 ENST00000379215.4
ENST00000420401.1
ECHDC3
enoyl CoA hydratase domain containing 3
chr18_-_21852143 0.17 ENST00000399443.3
OSBPL1A
oxysterol binding protein-like 1A
chr2_-_208031542 0.17 ENST00000423015.1
KLF7
Kruppel-like factor 7 (ubiquitous)
chr1_-_111506562 0.17 ENST00000485275.2
ENST00000369763.4
LRIF1
ligand dependent nuclear receptor interacting factor 1
chr16_+_57673207 0.16 ENST00000564783.1
ENST00000564729.1
ENST00000565976.1
ENST00000566508.1
ENST00000544297.1
GPR56
G protein-coupled receptor 56
chr6_+_147527103 0.16 ENST00000179882.6
STXBP5
syntaxin binding protein 5 (tomosyn)
chr1_+_26872324 0.16 ENST00000531382.1
RPS6KA1
ribosomal protein S6 kinase, 90kDa, polypeptide 1
chr5_+_446253 0.16 ENST00000315013.5
EXOC3
exocyst complex component 3
chr11_-_129817471 0.16 ENST00000423662.2
PRDM10
PR domain containing 10
chr16_+_2106134 0.15 ENST00000467949.1
TSC2
tuberous sclerosis 2
chr1_+_53392901 0.15 ENST00000371514.3
ENST00000528311.1
ENST00000371509.4
ENST00000407246.2
ENST00000371513.5
SCP2
sterol carrier protein 2
chr2_-_3606206 0.15 ENST00000315212.3
RNASEH1
ribonuclease H1
chr16_+_2533020 0.15 ENST00000562105.1
TBC1D24
TBC1 domain family, member 24
chr12_+_56075330 0.15 ENST00000394252.3
METTL7B
methyltransferase like 7B
chr12_+_113796347 0.15 ENST00000545182.2
ENST00000280800.3
PLBD2
phospholipase B domain containing 2
chr17_+_13972807 0.14 ENST00000429152.2
ENST00000261643.3
ENST00000536205.1
ENST00000537334.1
COX10
cytochrome c oxidase assembly homolog 10 (yeast)
chr1_+_52521957 0.14 ENST00000472944.2
ENST00000484036.1
BTF3L4
basic transcription factor 3-like 4
chr2_+_88991162 0.14 ENST00000283646.4
RPIA
ribose 5-phosphate isomerase A
chr1_-_150693318 0.14 ENST00000442853.1
ENST00000368995.4
ENST00000368993.2
ENST00000361824.2
ENST00000322343.7
HORMAD1
HORMA domain containing 1
chr10_-_29923893 0.14 ENST00000355867.4
SVIL
supervillin
chr10_-_27530997 0.14 ENST00000375901.1
ENST00000412279.1
ENST00000375905.4
ACBD5
acyl-CoA binding domain containing 5
chr2_+_108443388 0.13 ENST00000354986.4
ENST00000408999.3
RGPD4
RANBP2-like and GRIP domain containing 4
chr2_-_97405775 0.13 ENST00000264963.4
ENST00000537039.1
ENST00000377079.4
ENST00000426463.2
ENST00000534882.1
LMAN2L
lectin, mannose-binding 2-like
chr6_-_31763408 0.13 ENST00000444930.2
VARS
valyl-tRNA synthetase
chr19_+_38880695 0.13 ENST00000587947.1
ENST00000338502.4
SPRED3
sprouty-related, EVH1 domain containing 3
chr8_-_27462822 0.13 ENST00000522098.1
CLU
clusterin
chr1_-_160313025 0.13 ENST00000368069.3
ENST00000241704.7
COPA
coatomer protein complex, subunit alpha
chr1_-_109618566 0.13 ENST00000338366.5
TAF13
TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa
chr18_-_19283649 0.12 ENST00000584464.1
ENST00000578270.1
ABHD3
abhydrolase domain containing 3
chr5_+_147774275 0.12 ENST00000513826.1
FBXO38
F-box protein 38
chr1_+_150898733 0.12 ENST00000525956.1
SETDB1
SET domain, bifurcated 1
chr6_+_31554612 0.12 ENST00000211921.7
LST1
leukocyte specific transcript 1
chr7_-_6098770 0.12 ENST00000536084.1
ENST00000446699.1
ENST00000199389.6
EIF2AK1
eukaryotic translation initiation factor 2-alpha kinase 1
chr20_+_33462745 0.12 ENST00000488172.1
ACSS2
acyl-CoA synthetase short-chain family member 2
chr16_+_15596123 0.12 ENST00000452191.2
C16orf45
chromosome 16 open reading frame 45
chr12_-_52761262 0.12 ENST00000257901.3
KRT85
keratin 85
chr3_-_56950407 0.11 ENST00000496106.1
ARHGEF3
Rho guanine nucleotide exchange factor (GEF) 3
chr17_+_38375528 0.11 ENST00000583268.1
WIPF2
WAS/WASL interacting protein family, member 2
chr1_+_52521797 0.11 ENST00000313334.8
BTF3L4
basic transcription factor 3-like 4
chr12_+_57810198 0.11 ENST00000598001.1
AC126614.1
HCG1818482; Uncharacterized protein
chr11_-_798239 0.11 ENST00000531437.1
SLC25A22
solute carrier family 25 (mitochondrial carrier: glutamate), member 22
chr6_+_31554779 0.11 ENST00000376090.2
LST1
leukocyte specific transcript 1
chr12_-_323248 0.11 ENST00000535347.1
ENST00000536824.1
SLC6A12
solute carrier family 6 (neurotransmitter transporter), member 12
chr11_-_506316 0.11 ENST00000532055.1
ENST00000531540.1
RNH1
ribonuclease/angiogenin inhibitor 1
chr5_-_75008244 0.10 ENST00000510798.1
ENST00000446329.2
POC5
POC5 centriolar protein
chr6_+_24495185 0.10 ENST00000348925.2
ALDH5A1
aldehyde dehydrogenase 5 family, member A1
chr12_-_6716569 0.10 ENST00000544040.1
ENST00000545942.1
CHD4
chromodomain helicase DNA binding protein 4
chr11_-_798305 0.10 ENST00000531514.1
SLC25A22
solute carrier family 25 (mitochondrial carrier: glutamate), member 22
chr19_-_9731872 0.10 ENST00000424629.1
ENST00000326044.5
ENST00000354661.4
ENST00000435550.1
ENST00000444611.1
ENST00000421525.1
ZNF561
zinc finger protein 561
chr6_+_31554962 0.10 ENST00000376092.3
ENST00000376086.3
ENST00000303757.8
ENST00000376093.2
ENST00000376102.3
LST1
leukocyte specific transcript 1
chr22_-_31063782 0.09 ENST00000404885.1
ENST00000403268.1
ENST00000407308.1
ENST00000342474.4
ENST00000334679.3
DUSP18
dual specificity phosphatase 18
chr1_-_110052302 0.09 ENST00000369864.4
ENST00000369862.1
AMIGO1
adhesion molecule with Ig-like domain 1
chr4_-_147443043 0.09 ENST00000394059.4
ENST00000502607.1
ENST00000335472.7
ENST00000432059.2
ENST00000394062.3
SLC10A7
solute carrier family 10, member 7
chr5_+_125935960 0.09 ENST00000297540.4
PHAX
phosphorylated adaptor for RNA export
chr2_+_119981384 0.09 ENST00000393108.2
ENST00000354888.5
ENST00000450943.2
ENST00000393110.2
ENST00000393106.2
ENST00000409811.1
ENST00000393107.2
STEAP3
STEAP family member 3, metalloreductase
chr6_+_30978251 0.09 ENST00000561890.1
MUC22
mucin 22
chr17_-_9725388 0.09 ENST00000399363.4
RP11-477N12.3
Putative germ cell-specific gene 1-like protein 2
chr6_-_24667180 0.09 ENST00000545995.1
TDP2
tyrosyl-DNA phosphodiesterase 2
chr1_-_150693305 0.08 ENST00000368987.1
HORMAD1
HORMA domain containing 1
chr1_-_46642154 0.08 ENST00000540385.1
PIK3R3
phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
chr6_+_76311568 0.08 ENST00000370014.3
SENP6
SUMO1/sentrin specific peptidase 6
chr17_-_73267304 0.08 ENST00000579297.1
ENST00000580571.1
MIF4GD
MIF4G domain containing
chr4_-_7436671 0.08 ENST00000319098.4
PSAPL1
prosaposin-like 1 (gene/pseudogene)
chr6_-_24667232 0.08 ENST00000378198.4
TDP2
tyrosyl-DNA phosphodiesterase 2
chr12_-_125473600 0.08 ENST00000308736.2
DHX37
DEAH (Asp-Glu-Ala-His) box polypeptide 37
chr11_-_116663127 0.08 ENST00000433069.1
ENST00000542499.1
APOA5
apolipoprotein A-V
chr17_+_58677539 0.08 ENST00000305921.3
PPM1D
protein phosphatase, Mg2+/Mn2+ dependent, 1D
chr4_-_171011323 0.08 ENST00000509167.1
ENST00000353187.2
ENST00000507375.1
ENST00000515480.1
AADAT
aminoadipate aminotransferase
chr8_+_67624653 0.08 ENST00000521198.2
SGK3
serum/glucocorticoid regulated kinase family, member 3
chr15_+_67430339 0.07 ENST00000439724.3
SMAD3
SMAD family member 3
chr5_+_140174429 0.07 ENST00000520672.2
ENST00000378132.1
ENST00000526136.1
PCDHA2
protocadherin alpha 2
chr11_+_31531291 0.07 ENST00000350638.5
ENST00000379163.5
ENST00000395934.2
ELP4
elongator acetyltransferase complex subunit 4
chr1_+_174968564 0.07 ENST00000426793.1
CACYBP
calcyclin binding protein
chr3_+_185304059 0.07 ENST00000427465.2
SENP2
SUMO1/sentrin/SMT3 specific peptidase 2
chr11_-_116708302 0.07 ENST00000375320.1
ENST00000359492.2
ENST00000375329.2
ENST00000375323.1
APOA1
apolipoprotein A-I
chrX_-_134429952 0.07 ENST00000370764.1
ZNF75D
zinc finger protein 75D
chr1_-_86861660 0.06 ENST00000486215.1
ODF2L
outer dense fiber of sperm tails 2-like
chr14_-_24658053 0.06 ENST00000354464.6
IPO4
importin 4
chr22_+_24819565 0.06 ENST00000424232.1
ENST00000486108.1
ADORA2A
adenosine A2a receptor
chr16_+_56995854 0.06 ENST00000566128.1
CETP
cholesteryl ester transfer protein, plasma
chr4_+_2451700 0.06 ENST00000506607.1
RP11-503N18.3
Uncharacterized protein
chr17_+_26800756 0.06 ENST00000537681.1
SLC13A2
solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
chr4_-_147442982 0.06 ENST00000511374.1
ENST00000264986.3
SLC10A7
solute carrier family 10, member 7
chr19_+_39881951 0.06 ENST00000315588.5
ENST00000594368.1
ENST00000599213.2
ENST00000596297.1
MED29
mediator complex subunit 29
chr9_-_3489406 0.06 ENST00000457373.1
RFX3
regulatory factor X, 3 (influences HLA class II expression)
chr7_-_123198284 0.05 ENST00000355749.2
NDUFA5
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
chr1_+_52521928 0.05 ENST00000489308.2
BTF3L4
basic transcription factor 3-like 4
chr19_-_54761148 0.05 ENST00000316219.5
LILRB5
leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5
chr17_+_35767301 0.05 ENST00000225396.6
ENST00000417170.1
ENST00000590005.1
ENST00000590957.1
TADA2A
transcriptional adaptor 2A
chr2_-_21266816 0.05 ENST00000399256.4
APOB
apolipoprotein B
chr3_+_49297518 0.05 ENST00000440528.3
RP11-3B7.1
Uncharacterized protein
chr17_+_39994032 0.05 ENST00000293303.4
ENST00000438813.1
KLHL10
kelch-like family member 10
chr7_-_74489609 0.05 ENST00000329959.4
ENST00000503250.2
ENST00000543840.1
WBSCR16
Williams-Beuren syndrome chromosome region 16
chr11_+_73360024 0.05 ENST00000540431.1
PLEKHB1
pleckstrin homology domain containing, family B (evectins) member 1
chr16_-_18923035 0.05 ENST00000563836.1
SMG1
SMG1 phosphatidylinositol 3-kinase-related kinase
chr6_-_33771757 0.05 ENST00000507738.1
ENST00000266003.5
ENST00000430124.2
MLN
motilin
chr12_+_20522179 0.05 ENST00000359062.3
PDE3A
phosphodiesterase 3A, cGMP-inhibited
chr6_+_76311736 0.05 ENST00000447266.2
SENP6
SUMO1/sentrin specific peptidase 6
chr2_+_7118755 0.04 ENST00000433456.1
RNF144A
ring finger protein 144A

Network of associatons between targets according to the STRING database.

First level regulatory network of RARB

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.6 GO:0070512 regulation of histone H4-K20 methylation(GO:0070510) positive regulation of histone H4-K20 methylation(GO:0070512)
0.2 1.7 GO:2001166 regulation of histone H2B ubiquitination(GO:2001166) positive regulation of histone H2B ubiquitination(GO:2001168)
0.1 0.4 GO:1901842 negative regulation of high voltage-gated calcium channel activity(GO:1901842)
0.1 0.5 GO:0019860 uracil metabolic process(GO:0019860)
0.1 0.4 GO:1902771 regulation of choline O-acetyltransferase activity(GO:1902769) positive regulation of choline O-acetyltransferase activity(GO:1902771) negative regulation of tau-protein kinase activity(GO:1902948) positive regulation of early endosome to recycling endosome transport(GO:1902955) negative regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process(GO:1902960) negative regulation of neurofibrillary tangle assembly(GO:1902997) negative regulation of aspartic-type peptidase activity(GO:1905246)
0.1 0.3 GO:0006043 glucosamine catabolic process(GO:0006043)
0.1 0.5 GO:0043686 co-translational protein modification(GO:0043686)
0.1 0.4 GO:0060032 notochord regression(GO:0060032)
0.1 0.5 GO:1904209 regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904207) positive regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904209)
0.1 0.4 GO:1904764 negative regulation of fibril organization(GO:1902904) chaperone-mediated autophagy translocation complex disassembly(GO:1904764)
0.1 0.8 GO:0014827 intestine smooth muscle contraction(GO:0014827)
0.1 0.2 GO:0060629 regulation of homologous chromosome segregation(GO:0060629)
0.1 0.4 GO:1902378 vestibulocochlear nerve structural organization(GO:0021649) positive regulation of cytokine activity(GO:0060301) ganglion morphogenesis(GO:0061552) VEGF-activated neuropilin signaling pathway involved in axon guidance(GO:1902378) dorsal root ganglion morphogenesis(GO:1904835) otic placode development(GO:1905040)
0.1 0.4 GO:0019626 short-chain fatty acid catabolic process(GO:0019626)
0.1 0.3 GO:2000255 negative regulation of male germ cell proliferation(GO:2000255)
0.1 0.6 GO:0071233 cellular response to leucine(GO:0071233)
0.1 0.3 GO:0008616 queuosine biosynthetic process(GO:0008616) queuosine metabolic process(GO:0046116)
0.1 0.2 GO:1904717 excitatory chemical synaptic transmission(GO:0098976) regulation of AMPA glutamate receptor clustering(GO:1904717) positive regulation of AMPA glutamate receptor clustering(GO:1904719)
0.1 0.3 GO:0006540 glutamate decarboxylation to succinate(GO:0006540)
0.1 0.2 GO:0009138 pyrimidine nucleoside diphosphate metabolic process(GO:0009138)
0.0 0.6 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.0 0.5 GO:0046485 ether lipid metabolic process(GO:0046485)
0.0 0.6 GO:0070836 caveola assembly(GO:0070836)
0.0 0.2 GO:0060574 intestinal epithelial cell maturation(GO:0060574)
0.0 0.3 GO:0046601 positive regulation of centriole replication(GO:0046601)
0.0 0.3 GO:0090234 regulation of kinetochore assembly(GO:0090234)
0.0 0.3 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.0 0.3 GO:2000234 positive regulation of ribosome biogenesis(GO:0090070) positive regulation of rRNA processing(GO:2000234)
0.0 0.4 GO:0010587 miRNA catabolic process(GO:0010587)
0.0 0.2 GO:0043137 DNA replication, removal of RNA primer(GO:0043137)
0.0 0.3 GO:0043418 homocysteine catabolic process(GO:0043418)
0.0 0.5 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.0 0.3 GO:0050893 sensory processing(GO:0050893)
0.0 0.2 GO:0045204 MAPK export from nucleus(GO:0045204)
0.0 0.4 GO:0039536 negative regulation of RIG-I signaling pathway(GO:0039536)
0.0 0.6 GO:0070914 UV-damage excision repair(GO:0070914)
0.0 0.1 GO:0010902 positive regulation of very-low-density lipoprotein particle remodeling(GO:0010902)
0.0 0.1 GO:0006438 valyl-tRNA aminoacylation(GO:0006438)
0.0 0.6 GO:0090110 cargo loading into COPII-coated vesicle(GO:0090110)
0.0 0.1 GO:0006447 regulation of translational initiation by iron(GO:0006447)
0.0 0.2 GO:0006552 leucine catabolic process(GO:0006552)
0.0 0.1 GO:0006014 D-ribose metabolic process(GO:0006014) pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.0 0.3 GO:0060052 neurofilament cytoskeleton organization(GO:0060052)
0.0 0.7 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.0 0.1 GO:0006408 snRNA export from nucleus(GO:0006408)
0.0 0.2 GO:0032383 regulation of intracellular lipid transport(GO:0032377) regulation of intracellular sterol transport(GO:0032380) regulation of intracellular cholesterol transport(GO:0032383)
0.0 0.1 GO:0019427 acetate metabolic process(GO:0006083) acetate biosynthetic process(GO:0019413) acetyl-CoA biosynthetic process from acetate(GO:0019427) propionate metabolic process(GO:0019541) propionate biosynthetic process(GO:0019542)
0.0 0.2 GO:0031125 rRNA 3'-end processing(GO:0031125)
0.0 0.2 GO:0019530 taurine metabolic process(GO:0019530)
0.0 0.2 GO:0019509 L-methionine biosynthetic process from methylthioadenosine(GO:0019509)
0.0 0.2 GO:0051013 microtubule severing(GO:0051013)
0.0 0.3 GO:0038007 netrin-activated signaling pathway(GO:0038007)
0.0 0.8 GO:0034080 CENP-A containing nucleosome assembly(GO:0034080) CENP-A containing chromatin organization(GO:0061641)
0.0 0.1 GO:0010903 regulation of very-low-density lipoprotein particle remodeling(GO:0010901) negative regulation of very-low-density lipoprotein particle remodeling(GO:0010903)
0.0 0.1 GO:0046604 positive regulation of mitotic centrosome separation(GO:0046604)
0.0 0.2 GO:2000491 positive regulation of hepatic stellate cell activation(GO:2000491)
0.0 0.1 GO:1902996 regulation of neurofibrillary tangle assembly(GO:1902996)
0.0 0.1 GO:0034371 chylomicron remodeling(GO:0034371)
0.0 0.6 GO:0051290 protein heterotetramerization(GO:0051290)
0.0 0.4 GO:0070262 peptidyl-serine dephosphorylation(GO:0070262)
0.0 0.2 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.1 GO:0030242 pexophagy(GO:0030242)
0.0 0.1 GO:1903976 negative regulation of glial cell migration(GO:1903976)
0.0 0.1 GO:0072553 terminal button organization(GO:0072553)
0.0 0.3 GO:0001514 selenocysteine incorporation(GO:0001514) translational readthrough(GO:0006451)
0.0 0.2 GO:1901525 negative regulation of macromitophagy(GO:1901525)
0.0 0.2 GO:1901078 negative regulation of relaxation of muscle(GO:1901078) negative regulation of relaxation of cardiac muscle(GO:1901898)
0.0 0.3 GO:0051601 exocyst localization(GO:0051601)
0.0 0.1 GO:0090309 positive regulation of methylation-dependent chromatin silencing(GO:0090309)
0.0 0.2 GO:0007221 positive regulation of transcription of Notch receptor target(GO:0007221)
0.0 1.0 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)
0.0 0.1 GO:0033512 L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-kynurenine metabolic process(GO:0097052)
0.0 0.1 GO:0048808 male genitalia morphogenesis(GO:0048808) male anatomical structure morphogenesis(GO:0090598)
0.0 0.3 GO:0040015 negative regulation of multicellular organism growth(GO:0040015)
0.0 0.1 GO:0014057 positive regulation of acetylcholine secretion, neurotransmission(GO:0014057)
0.0 0.1 GO:0034370 triglyceride-rich lipoprotein particle remodeling(GO:0034370)
0.0 0.3 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.0 0.2 GO:0046325 negative regulation of glucose import(GO:0046325)
0.0 0.1 GO:0002069 columnar/cuboidal epithelial cell maturation(GO:0002069)
0.0 0.1 GO:0098706 ferric iron import into cell(GO:0097461) ferric iron import across plasma membrane(GO:0098706)
0.0 0.1 GO:0061767 negative regulation of lung blood pressure(GO:0061767)
0.0 0.5 GO:0032467 positive regulation of cytokinesis(GO:0032467)
0.0 0.2 GO:0060124 positive regulation of growth hormone secretion(GO:0060124)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.6 GO:0031436 BRCA1-BARD1 complex(GO:0031436)
0.2 1.7 GO:0033503 HULC complex(GO:0033503)
0.1 0.2 GO:0097636 intrinsic component of autophagosome membrane(GO:0097636) integral component of autophagosome membrane(GO:0097637)
0.1 0.4 GO:0098575 lumenal side of lysosomal membrane(GO:0098575)
0.1 0.6 GO:0031465 Cul4B-RING E3 ubiquitin ligase complex(GO:0031465)
0.1 0.2 GO:0098592 cytoplasmic side of apical plasma membrane(GO:0098592)
0.1 0.3 GO:0060053 neurofilament cytoskeleton(GO:0060053)
0.1 0.5 GO:0097425 smooth endoplasmic reticulum membrane(GO:0030868) smooth endoplasmic reticulum part(GO:0097425)
0.0 0.3 GO:0098536 deuterosome(GO:0098536)
0.0 0.2 GO:1905202 3-methylcrotonyl-CoA carboxylase complex, mitochondrial(GO:0002169) methylcrotonoyl-CoA carboxylase complex(GO:1905202)
0.0 0.5 GO:0033269 internode region of axon(GO:0033269)
0.0 0.4 GO:0097443 sorting endosome(GO:0097443)
0.0 0.6 GO:0042555 MCM complex(GO:0042555)
0.0 0.2 GO:0033596 TSC1-TSC2 complex(GO:0033596)
0.0 0.2 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.0 0.4 GO:0001520 outer dense fiber(GO:0001520)
0.0 0.4 GO:0001940 male pronucleus(GO:0001940)
0.0 0.4 GO:0005641 nuclear envelope lumen(GO:0005641)
0.0 0.4 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.0 0.5 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.5 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 0.2 GO:0071204 histone pre-mRNA 3'end processing complex(GO:0071204)
0.0 0.2 GO:0034363 intermediate-density lipoprotein particle(GO:0034363)
0.0 0.3 GO:0034464 BBSome(GO:0034464)
0.0 0.3 GO:0031931 TORC1 complex(GO:0031931)
0.0 0.1 GO:0036449 microtubule minus-end(GO:0036449)
0.0 0.1 GO:0032311 angiogenin-PRI complex(GO:0032311)
0.0 0.2 GO:0000322 storage vacuole(GO:0000322)
0.0 0.0 GO:0008043 intracellular ferritin complex(GO:0008043) ferritin complex(GO:0070288)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:0001156 TFIIIC-class transcription factor binding(GO:0001156)
0.1 0.6 GO:0052740 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.1 0.3 GO:0004342 glucosamine-6-phosphate deaminase activity(GO:0004342)
0.1 0.2 GO:0071207 histone pre-mRNA stem-loop binding(GO:0071207)
0.1 0.8 GO:0043176 amine binding(GO:0043176) serotonin binding(GO:0051378)
0.1 0.3 GO:0070012 oligopeptidase activity(GO:0070012)
0.1 0.4 GO:0050265 RNA uridylyltransferase activity(GO:0050265)
0.1 0.2 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity(GO:0010309)
0.1 0.6 GO:0005087 Ran guanyl-nucleotide exchange factor activity(GO:0005087)
0.1 0.2 GO:0070260 tyrosyl-RNA phosphodiesterase activity(GO:0036317) 5'-tyrosyl-DNA phosphodiesterase activity(GO:0070260)
0.1 0.2 GO:0070538 oleic acid binding(GO:0070538)
0.1 0.3 GO:0008479 queuine tRNA-ribosyltransferase activity(GO:0008479)
0.1 0.3 GO:0004735 pyrroline-5-carboxylate reductase activity(GO:0004735)
0.0 0.3 GO:0008269 JAK pathway signal transduction adaptor activity(GO:0008269)
0.0 0.2 GO:0004485 methylcrotonoyl-CoA carboxylase activity(GO:0004485)
0.0 0.4 GO:0055131 C3HC4-type RING finger domain binding(GO:0055131)
0.0 0.2 GO:0098626 methylselenol reductase activity(GO:0098625) methylseleninic acid reductase activity(GO:0098626)
0.0 0.2 GO:0001512 dihydronicotinamide riboside quinone reductase activity(GO:0001512) melatonin binding(GO:1904408)
0.0 0.3 GO:0005332 gamma-aminobutyric acid:sodium symporter activity(GO:0005332)
0.0 0.5 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.0 0.5 GO:0019911 structural constituent of myelin sheath(GO:0019911)
0.0 0.3 GO:0004800 thyroxine 5'-deiodinase activity(GO:0004800)
0.0 0.3 GO:0008379 thioredoxin peroxidase activity(GO:0008379)
0.0 0.4 GO:0031419 cobalamin binding(GO:0031419)
0.0 0.4 GO:1990226 histone methyltransferase binding(GO:1990226)
0.0 0.1 GO:0015361 low-affinity sodium:dicarboxylate symporter activity(GO:0015361)
0.0 0.5 GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity(GO:0004579)
0.0 0.4 GO:0038085 vascular endothelial growth factor binding(GO:0038085)
0.0 0.1 GO:0047536 2-aminoadipate transaminase activity(GO:0047536)
0.0 0.2 GO:0045134 uridine-diphosphatase activity(GO:0045134)
0.0 0.7 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.0 0.4 GO:0016929 SUMO-specific protease activity(GO:0016929)
0.0 0.2 GO:0035473 lipase binding(GO:0035473)
0.0 0.1 GO:0004832 valine-tRNA ligase activity(GO:0004832)
0.0 0.1 GO:0017129 triglyceride binding(GO:0017129)
0.0 0.1 GO:0004694 eukaryotic translation initiation factor 2alpha kinase activity(GO:0004694)
0.0 0.2 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 2.2 GO:0003684 damaged DNA binding(GO:0003684)
0.0 0.2 GO:0005280 hydrogen:amino acid symporter activity(GO:0005280)
0.0 0.2 GO:0008568 microtubule-severing ATPase activity(GO:0008568)
0.0 0.1 GO:0070653 high-density lipoprotein particle receptor binding(GO:0070653)
0.0 0.4 GO:0030306 ADP-ribosylation factor binding(GO:0030306)
0.0 1.9 GO:0002039 p53 binding(GO:0002039)
0.0 0.0 GO:0004119 cGMP-inhibited cyclic-nucleotide phosphodiesterase activity(GO:0004119)
0.0 0.1 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.0 0.6 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 0.1 GO:0004311 farnesyltranstransferase activity(GO:0004311)
0.0 0.3 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.1 GO:0008823 cupric reductase activity(GO:0008823) ferric-chelate reductase (NADPH) activity(GO:0052851)
0.0 0.2 GO:0016290 palmitoyl-CoA hydrolase activity(GO:0016290)
0.0 0.9 GO:0042169 SH2 domain binding(GO:0042169)
0.0 0.1 GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.0 0.1 GO:0031962 mineralocorticoid receptor binding(GO:0031962)
0.0 0.5 GO:0043015 gamma-tubulin binding(GO:0043015)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.6 PID BARD1 PATHWAY BARD1 signaling events
0.0 0.4 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network
0.0 1.4 PID PLK1 PATHWAY PLK1 signaling events

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.8 REACTOME SEROTONIN RECEPTORS Genes involved in Serotonin receptors
0.0 1.6 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.0 0.6 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.5 REACTOME ACYL CHAIN REMODELLING OF PS Genes involved in Acyl chain remodelling of PS
0.0 1.0 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.0 0.7 REACTOME ENERGY DEPENDENT REGULATION OF MTOR BY LKB1 AMPK Genes involved in Energy dependent regulation of mTOR by LKB1-AMPK
0.0 0.4 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.0 0.5 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.0 0.2 REACTOME PROCESSIVE SYNTHESIS ON THE LAGGING STRAND Genes involved in Processive synthesis on the lagging strand
0.0 0.5 REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC
0.0 0.2 REACTOME RECYCLING OF BILE ACIDS AND SALTS Genes involved in Recycling of bile acids and salts
0.0 0.4 REACTOME INSULIN SYNTHESIS AND PROCESSING Genes involved in Insulin Synthesis and Processing
0.0 0.4 REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY Genes involved in Post-chaperonin tubulin folding pathway
0.0 0.8 REACTOME DEPOSITION OF NEW CENPA CONTAINING NUCLEOSOMES AT THE CENTROMERE Genes involved in Deposition of New CENPA-containing Nucleosomes at the Centromere