SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
RFX2 | hg19_v2_chr19_-_6110474_6110551 | 0.69 | 7.0e-04 | Click! |
RFX3 | hg19_v2_chr9_-_3525968_3526016 | -0.46 | 4.0e-02 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 19.2 | GO:0002021 | response to dietary excess(GO:0002021) |
0.1 | 15.4 | GO:0032436 | positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) |
1.1 | 12.1 | GO:0018103 | protein C-linked glycosylation(GO:0018103) peptidyl-tryptophan modification(GO:0018211) protein C-linked glycosylation via tryptophan(GO:0018317) protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan(GO:0018406) |
0.6 | 12.0 | GO:0035641 | locomotory exploration behavior(GO:0035641) |
0.4 | 11.5 | GO:1901663 | ubiquinone biosynthetic process(GO:0006744) quinone biosynthetic process(GO:1901663) |
0.8 | 11.3 | GO:0006048 | UDP-N-acetylglucosamine biosynthetic process(GO:0006048) |
0.1 | 10.3 | GO:0048791 | calcium ion-regulated exocytosis of neurotransmitter(GO:0048791) |
1.1 | 9.8 | GO:0002318 | myeloid progenitor cell differentiation(GO:0002318) |
0.8 | 9.7 | GO:0035845 | photoreceptor cell outer segment organization(GO:0035845) |
0.2 | 9.5 | GO:0006298 | mismatch repair(GO:0006298) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 19.4 | GO:0036038 | MKS complex(GO:0036038) |
0.1 | 18.7 | GO:0005802 | trans-Golgi network(GO:0005802) |
0.0 | 12.8 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.7 | 11.8 | GO:0033010 | paranodal junction(GO:0033010) |
0.1 | 11.7 | GO:0005637 | nuclear inner membrane(GO:0005637) |
0.1 | 10.8 | GO:0000315 | organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762) |
0.1 | 9.9 | GO:0030665 | clathrin-coated vesicle membrane(GO:0030665) |
0.6 | 9.3 | GO:0005664 | origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664) |
0.1 | 8.1 | GO:0019005 | SCF ubiquitin ligase complex(GO:0019005) |
0.0 | 7.7 | GO:0005741 | mitochondrial outer membrane(GO:0005741) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 17.3 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.1 | 16.0 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.5 | 13.1 | GO:0042609 | CD4 receptor binding(GO:0042609) |
0.4 | 12.9 | GO:0000030 | mannosyltransferase activity(GO:0000030) |
0.0 | 11.4 | GO:0015631 | tubulin binding(GO:0015631) |
0.0 | 11.0 | GO:0017137 | Rab GTPase binding(GO:0017137) |
0.0 | 11.0 | GO:0005509 | calcium ion binding(GO:0005509) |
0.1 | 10.3 | GO:0005544 | calcium-dependent phospholipid binding(GO:0005544) |
0.0 | 9.3 | GO:0046982 | protein heterodimerization activity(GO:0046982) |
1.5 | 9.1 | GO:0008853 | exodeoxyribonuclease III activity(GO:0008853) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 15.9 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.2 | 11.2 | PID IL8 CXCR2 PATHWAY | IL8- and CXCR2-mediated signaling events |
0.1 | 11.2 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.1 | 8.1 | PID AURORA B PATHWAY | Aurora B signaling |
0.1 | 5.6 | PID ECADHERIN STABILIZATION PATHWAY | Stabilization and expansion of the E-cadherin adherens junction |
0.1 | 4.7 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.1 | 4.6 | PID BARD1 PATHWAY | BARD1 signaling events |
0.0 | 3.6 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.0 | 3.6 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 3.5 | PID DNA PK PATHWAY | DNA-PK pathway in nonhomologous end joining |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 17.3 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.3 | 13.5 | REACTOME KINESINS | Genes involved in Kinesins |
0.6 | 10.7 | REACTOME SYNTHESIS OF SUBSTRATES IN N GLYCAN BIOSYTHESIS | Genes involved in Synthesis of substrates in N-glycan biosythesis |
0.2 | 10.6 | REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS | Genes involved in Association of TriC/CCT with target proteins during biosynthesis |
0.1 | 9.8 | REACTOME MITOCHONDRIAL PROTEIN IMPORT | Genes involved in Mitochondrial Protein Import |
0.0 | 7.8 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.1 | 7.3 | REACTOME G1 PHASE | Genes involved in G1 Phase |
0.2 | 7.0 | REACTOME TRAFFICKING OF GLUR2 CONTAINING AMPA RECEPTORS | Genes involved in Trafficking of GluR2-containing AMPA receptors |
0.2 | 6.3 | REACTOME CRMPS IN SEMA3A SIGNALING | Genes involved in CRMPs in Sema3A signaling |
0.0 | 6.0 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |