SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SOX2 | hg19_v2_chr3_+_181429704_181429722 | 0.36 | 1.1e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 40.7 | GO:0070268 | cornification(GO:0070268) |
1.4 | 36.6 | GO:0060670 | branching involved in labyrinthine layer morphogenesis(GO:0060670) |
1.0 | 35.4 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
1.7 | 31.6 | GO:0061302 | smooth muscle cell-matrix adhesion(GO:0061302) |
0.1 | 26.1 | GO:0043484 | regulation of RNA splicing(GO:0043484) |
6.2 | 24.6 | GO:0007499 | ectoderm and mesoderm interaction(GO:0007499) |
0.2 | 20.8 | GO:0001578 | microtubule bundle formation(GO:0001578) |
0.4 | 19.4 | GO:0060216 | definitive hemopoiesis(GO:0060216) |
0.6 | 19.1 | GO:0000185 | activation of MAPKKK activity(GO:0000185) |
0.3 | 18.0 | GO:1901998 | toxin transport(GO:1901998) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 81.3 | GO:0070161 | anchoring junction(GO:0070161) |
1.1 | 35.4 | GO:0030056 | hemidesmosome(GO:0030056) |
0.4 | 29.8 | GO:0045095 | keratin filament(GO:0045095) |
2.9 | 23.2 | GO:0097442 | CA3 pyramidal cell dendrite(GO:0097442) |
0.2 | 23.2 | GO:0005791 | rough endoplasmic reticulum(GO:0005791) |
0.5 | 22.4 | GO:0030057 | desmosome(GO:0030057) |
1.9 | 20.7 | GO:0044354 | pinosome(GO:0044352) macropinosome(GO:0044354) |
0.1 | 20.1 | GO:0070821 | tertiary granule membrane(GO:0070821) |
0.1 | 19.9 | GO:0016605 | PML body(GO:0016605) |
0.0 | 19.7 | GO:0016607 | nuclear speck(GO:0016607) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 46.8 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.2 | 40.1 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
2.0 | 30.6 | GO:0038062 | protein tyrosine kinase collagen receptor activity(GO:0038062) |
0.1 | 29.7 | GO:0045296 | cadherin binding(GO:0045296) |
0.3 | 26.7 | GO:0005080 | protein kinase C binding(GO:0005080) |
1.6 | 25.2 | GO:0097371 | MDM2/MDM4 family protein binding(GO:0097371) |
0.0 | 24.8 | GO:0004842 | ubiquitin-protein transferase activity(GO:0004842) |
0.1 | 23.2 | GO:0044822 | mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822) |
0.1 | 22.1 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
0.7 | 21.8 | GO:0002162 | dystroglycan binding(GO:0002162) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 45.9 | NABA COLLAGENS | Genes encoding collagen proteins |
0.4 | 43.3 | PID FOXO PATHWAY | FoxO family signaling |
0.2 | 37.8 | PID P73PATHWAY | p73 transcription factor network |
0.3 | 30.4 | PID ERBB1 RECEPTOR PROXIMAL PATHWAY | EGF receptor (ErbB1) signaling pathway |
0.3 | 29.2 | PID NOTCH PATHWAY | Notch signaling pathway |
0.3 | 26.3 | PID FAK PATHWAY | Signaling events mediated by focal adhesion kinase |
0.3 | 22.7 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
0.6 | 21.7 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.5 | 19.3 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.1 | 19.2 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 40.3 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
1.0 | 22.9 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |
0.2 | 20.8 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.2 | 20.7 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.1 | 18.3 | REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES | Genes involved in Antiviral mechanism by IFN-stimulated genes |
0.5 | 17.7 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.1 | 15.1 | REACTOME O LINKED GLYCOSYLATION OF MUCINS | Genes involved in O-linked glycosylation of mucins |
0.5 | 14.9 | REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS | Genes involved in Ionotropic activity of Kainate Receptors |
0.3 | 14.7 | REACTOME HS GAG BIOSYNTHESIS | Genes involved in HS-GAG biosynthesis |
0.1 | 12.6 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |