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SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for UAAGACG

Z-value: 0.17

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miRNA associated with seed UAAGACG

NamemiRBASE accession
hsa-miR-208a-3p
MIMAT0000241
hsa-miR-208b-3p
MIMAT0004960

Activity profile of UAAGACG motif

Sorted Z-values of UAAGACG motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr12_-_93323013 0.19 ENST00000322349.8
EEA1
early endosome antigen 1
chr10_+_112631547 0.19 ENST00000280154.7
ENST00000393104.2
PDCD4
programmed cell death 4 (neoplastic transformation inhibitor)
chr17_+_66508537 0.12 ENST00000392711.1
ENST00000585427.1
ENST00000589228.1
ENST00000536854.2
ENST00000588702.1
ENST00000589309.1
PRKAR1A
protein kinase, cAMP-dependent, regulatory, type I, alpha
chr6_-_13711773 0.12 ENST00000011619.3
RANBP9
RAN binding protein 9
chr14_-_50698276 0.11 ENST00000216373.5
SOS2
son of sevenless homolog 2 (Drosophila)
chr7_+_90225796 0.11 ENST00000380050.3
CDK14
cyclin-dependent kinase 14
chr6_+_36646435 0.10 ENST00000244741.5
ENST00000405375.1
ENST00000373711.2
CDKN1A
cyclin-dependent kinase inhibitor 1A (p21, Cip1)
chr10_+_11206925 0.10 ENST00000354440.2
ENST00000315874.4
ENST00000427450.1
CELF2
CUGBP, Elav-like family member 2
chr8_+_48920960 0.10 ENST00000523111.2
ENST00000523432.1
ENST00000521346.1
ENST00000517630.1
UBE2V2
ubiquitin-conjugating enzyme E2 variant 2
chr15_+_52311398 0.10 ENST00000261845.5
MAPK6
mitogen-activated protein kinase 6
chr7_-_105029329 0.10 ENST00000393651.3
ENST00000460391.1
SRPK2
SRSF protein kinase 2
chr10_-_27149792 0.09 ENST00000376140.3
ENST00000376170.4
ABI1
abl-interactor 1
chr10_-_32345305 0.09 ENST00000302418.4
KIF5B
kinesin family member 5B
chr3_+_43328004 0.09 ENST00000454177.1
ENST00000429705.2
ENST00000296088.7
ENST00000437827.1
SNRK
SNF related kinase
chrX_+_68048803 0.09 ENST00000204961.4
EFNB1
ephrin-B1
chr1_-_225840747 0.08 ENST00000366843.2
ENST00000366844.3
ENAH
enabled homolog (Drosophila)
chr12_-_26278030 0.08 ENST00000242728.4
BHLHE41
basic helix-loop-helix family, member e41
chr3_-_18466787 0.08 ENST00000338745.6
ENST00000450898.1
SATB1
SATB homeobox 1
chr9_+_131644388 0.08 ENST00000372600.4
LRRC8A
leucine rich repeat containing 8 family, member A
chr5_+_60628074 0.08 ENST00000252744.5
ZSWIM6
zinc finger, SWIM-type containing 6
chr15_-_49338748 0.07 ENST00000559471.1
SECISBP2L
SECIS binding protein 2-like
chr1_-_108507631 0.07 ENST00000527011.1
ENST00000370056.4
VAV3
vav 3 guanine nucleotide exchange factor
chr15_+_57210818 0.07 ENST00000438423.2
ENST00000267811.5
ENST00000452095.2
ENST00000559609.1
ENST00000333725.5
TCF12
transcription factor 12
chr17_-_45266542 0.07 ENST00000531206.1
ENST00000527547.1
ENST00000446365.2
ENST00000575483.1
ENST00000066544.3
CDC27
cell division cycle 27
chr3_-_72496035 0.07 ENST00000477973.2
RYBP
RING1 and YY1 binding protein
chr4_+_139936905 0.07 ENST00000280614.2
CCRN4L
CCR4 carbon catabolite repression 4-like (S. cerevisiae)
chr16_-_4897266 0.06 ENST00000591451.1
ENST00000436648.5
ENST00000381983.3
ENST00000588297.1
ENST00000321919.9
GLYR1
glyoxylate reductase 1 homolog (Arabidopsis)
chr5_-_114880533 0.06 ENST00000274457.3
FEM1C
fem-1 homolog c (C. elegans)
chr21_-_16437255 0.06 ENST00000400199.1
ENST00000400202.1
NRIP1
nuclear receptor interacting protein 1
chr10_+_98592009 0.06 ENST00000540664.1
ENST00000371103.3
LCOR
ligand dependent nuclear receptor corepressor
chr5_+_112043186 0.06 ENST00000509732.1
ENST00000457016.1
ENST00000507379.1
APC
adenomatous polyposis coli
chr17_+_29718642 0.05 ENST00000325874.8
RAB11FIP4
RAB11 family interacting protein 4 (class II)
chr3_+_61547585 0.05 ENST00000295874.10
ENST00000474889.1
PTPRG
protein tyrosine phosphatase, receptor type, G
chr8_-_67579418 0.05 ENST00000310421.4
VCPIP1
valosin containing protein (p97)/p47 complex interacting protein 1
chr5_+_122110691 0.05 ENST00000379516.2
ENST00000505934.1
ENST00000514949.1
SNX2
sorting nexin 2
chr13_-_50367057 0.05 ENST00000261667.3
KPNA3
karyopherin alpha 3 (importin alpha 4)
chr7_-_139876812 0.05 ENST00000397560.2
JHDM1D
lysine (K)-specific demethylase 7A
chr14_-_61116168 0.05 ENST00000247182.6
SIX1
SIX homeobox 1
chr2_-_68290106 0.05 ENST00000407324.1
ENST00000355848.3
ENST00000409302.1
ENST00000410067.3
C1D
C1D nuclear receptor corepressor
chr1_+_43148059 0.04 ENST00000321358.7
ENST00000332220.6
YBX1
Y box binding protein 1
chr11_-_118047376 0.04 ENST00000278947.5
SCN2B
sodium channel, voltage-gated, type II, beta subunit
chr15_-_56535464 0.04 ENST00000559447.2
ENST00000422057.1
ENST00000317318.6
ENST00000423270.1
RFX7
regulatory factor X, 7
chr16_+_54964740 0.04 ENST00000394636.4
IRX5
iroquois homeobox 5
chr18_-_21977748 0.04 ENST00000399441.4
ENST00000319481.3
OSBPL1A
oxysterol binding protein-like 1A
chr5_-_79287060 0.04 ENST00000512560.1
ENST00000509852.1
ENST00000512528.1
MTX3
metaxin 3
chr7_-_30029367 0.04 ENST00000242059.5
SCRN1
secernin 1
chr2_-_208030647 0.04 ENST00000309446.6
KLF7
Kruppel-like factor 7 (ubiquitous)
chr7_-_44924939 0.04 ENST00000395699.2
PURB
purine-rich element binding protein B
chr6_+_163835669 0.04 ENST00000453779.2
ENST00000275262.7
ENST00000392127.2
ENST00000361752.3
QKI
QKI, KH domain containing, RNA binding
chr17_-_8534067 0.04 ENST00000360416.3
ENST00000269243.4
MYH10
myosin, heavy chain 10, non-muscle
chr5_-_76788317 0.03 ENST00000296679.4
WDR41
WD repeat domain 41
chr3_+_186501336 0.03 ENST00000323963.5
ENST00000440191.2
ENST00000356531.5
EIF4A2
eukaryotic translation initiation factor 4A2
chr1_-_55680762 0.03 ENST00000407756.1
ENST00000294383.6
USP24
ubiquitin specific peptidase 24
chr12_+_72148614 0.03 ENST00000261263.3
RAB21
RAB21, member RAS oncogene family
chr6_+_21593972 0.03 ENST00000244745.1
ENST00000543472.1
SOX4
SRY (sex determining region Y)-box 4
chr20_+_51588873 0.03 ENST00000371497.5
TSHZ2
teashirt zinc finger homeobox 2
chr10_-_89577910 0.03 ENST00000308448.7
ENST00000541004.1
ATAD1
ATPase family, AAA domain containing 1
chr9_+_96793076 0.03 ENST00000375360.3
PTPDC1
protein tyrosine phosphatase domain containing 1
chr14_-_21737610 0.03 ENST00000320084.7
ENST00000449098.1
ENST00000336053.6
HNRNPC
heterogeneous nuclear ribonucleoprotein C (C1/C2)
chr9_-_140196703 0.03 ENST00000356628.2
NRARP
NOTCH-regulated ankyrin repeat protein
chr5_-_131132614 0.03 ENST00000307968.7
ENST00000307954.8
FNIP1
folliculin interacting protein 1
chr10_+_63661053 0.03 ENST00000279873.7
ARID5B
AT rich interactive domain 5B (MRF1-like)
chr9_+_101867359 0.03 ENST00000374994.4
TGFBR1
transforming growth factor, beta receptor 1
chr3_+_29322803 0.03 ENST00000396583.3
ENST00000383767.2
RBMS3
RNA binding motif, single stranded interacting protein 3
chr3_-_15374033 0.02 ENST00000253688.5
ENST00000383791.3
SH3BP5
SH3-domain binding protein 5 (BTK-associated)
chr20_+_48552908 0.02 ENST00000244061.2
RNF114
ring finger protein 114
chr8_+_42752053 0.02 ENST00000307602.4
HOOK3
hook microtubule-tethering protein 3
chr17_-_62050278 0.02 ENST00000578147.1
ENST00000435607.1
SCN4A
sodium channel, voltage-gated, type IV, alpha subunit
chr1_+_97187318 0.02 ENST00000609116.1
ENST00000370198.1
ENST00000370197.1
ENST00000426398.2
ENST00000394184.3
PTBP2
polypyrimidine tract binding protein 2
chr9_-_72374848 0.02 ENST00000377200.5
ENST00000340434.4
ENST00000472967.2
PTAR1
protein prenyltransferase alpha subunit repeat containing 1
chr17_-_40306934 0.02 ENST00000592574.1
ENST00000550406.1
ENST00000547517.1
ENST00000393860.3
ENST00000346213.4
CTD-2132N18.3
RAB5C
Uncharacterized protein
RAB5C, member RAS oncogene family
chr15_+_44829255 0.01 ENST00000261868.5
ENST00000424492.3
EIF3J
eukaryotic translation initiation factor 3, subunit J
chr15_+_101142722 0.01 ENST00000332783.7
ENST00000558747.1
ENST00000343276.4
ASB7
ankyrin repeat and SOCS box containing 7
chr1_-_39339777 0.01 ENST00000397572.2
MYCBP
MYC binding protein
chrX_+_16737718 0.01 ENST00000380155.3
SYAP1
synapse associated protein 1
chr13_+_50571155 0.01 ENST00000420995.2
ENST00000378182.3
ENST00000356017.4
ENST00000457662.2
TRIM13
tripartite motif containing 13
chrX_+_41192595 0.01 ENST00000399959.2
DDX3X
DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
chr6_+_37225540 0.01 ENST00000373491.3
TBC1D22B
TBC1 domain family, member 22B
chr2_-_131850951 0.01 ENST00000409185.1
ENST00000389915.3
FAM168B
family with sequence similarity 168, member B
chr22_+_20067738 0.01 ENST00000351989.3
ENST00000383024.2
DGCR8
DGCR8 microprocessor complex subunit
chr1_+_19923454 0.01 ENST00000602662.1
ENST00000602293.1
ENST00000322753.6
MINOS1-NBL1
MINOS1
MINOS1-NBL1 readthrough
mitochondrial inner membrane organizing system 1
chr20_+_3451650 0.01 ENST00000262919.5
ATRN
attractin
chr5_+_56469775 0.01 ENST00000424459.3
GPBP1
GC-rich promoter binding protein 1
chr22_+_30279144 0.01 ENST00000401950.2
ENST00000333027.3
ENST00000445401.1
ENST00000323630.5
ENST00000351488.3
MTMR3
myotubularin related protein 3
chr7_+_155089486 0.01 ENST00000340368.4
ENST00000344756.4
ENST00000425172.1
ENST00000342407.5
INSIG1
insulin induced gene 1
chr11_-_86666427 0.01 ENST00000531380.1
FZD4
frizzled family receptor 4
chr1_+_110527308 0.01 ENST00000369799.5
AHCYL1
adenosylhomocysteinase-like 1
chr2_+_42396472 0.01 ENST00000318522.5
ENST00000402711.2
EML4
echinoderm microtubule associated protein like 4
chr1_-_21113105 0.00 ENST00000375000.1
ENST00000419490.1
ENST00000414993.1
ENST00000443615.1
ENST00000312239.5
HP1BP3
heterochromatin protein 1, binding protein 3
chr5_+_129240151 0.00 ENST00000305031.4
CHSY3
chondroitin sulfate synthase 3
chr10_-_75255724 0.00 ENST00000342558.3
ENST00000360663.5
ENST00000394829.2
ENST00000394828.2
ENST00000394822.2
PPP3CB
protein phosphatase 3, catalytic subunit, beta isozyme
chr13_+_100258907 0.00 ENST00000376355.3
ENST00000376360.1
ENST00000444838.2
ENST00000376354.1
ENST00000339105.4
CLYBL
citrate lyase beta like
chr1_-_39347255 0.00 ENST00000454994.2
ENST00000357771.3
GJA9
gap junction protein, alpha 9, 59kDa
chr17_+_11144580 0.00 ENST00000441885.3
ENST00000432116.3
ENST00000409168.3
SHISA6
shisa family member 6
chr17_+_58677539 0.00 ENST00000305921.3
PPM1D
protein phosphatase, Mg2+/Mn2+ dependent, 1D
chr22_-_46933067 0.00 ENST00000262738.3
ENST00000395964.1
CELSR1
cadherin, EGF LAG seven-pass G-type receptor 1
chr2_-_174830430 0.00 ENST00000310015.6
ENST00000455789.2
SP3
Sp3 transcription factor
chr1_-_205782304 0.00 ENST00000367137.3
SLC41A1
solute carrier family 41 (magnesium transporter), member 1
chr6_+_133562472 0.00 ENST00000430974.2
ENST00000367895.5
ENST00000355167.3
ENST00000355286.6
EYA4
eyes absent homolog 4 (Drosophila)
chr6_-_99797522 0.00 ENST00000389677.5
FAXC
failed axon connections homolog (Drosophila)

Network of associatons between targets according to the STRING database.

First level regulatory network of UAAGACG

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:1904761 negative regulation of myofibroblast differentiation(GO:1904761)
0.0 0.1 GO:0001543 ovarian follicle rupture(GO:0001543)
0.0 0.1 GO:1903450 regulation of G1 to G0 transition(GO:1903450) positive regulation of G1 to G0 transition(GO:1903452)
0.0 0.1 GO:0035617 stress granule disassembly(GO:0035617)
0.0 0.1 GO:0060574 intestinal epithelial cell maturation(GO:0060574)
0.0 0.1 GO:0035063 nuclear speck organization(GO:0035063)
0.0 0.0 GO:2000729 positive regulation of mesenchymal cell proliferation involved in ureter development(GO:2000729)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0070557 PCNA-p21 complex(GO:0070557)
0.0 0.1 GO:0031372 UBC13-MMS2 complex(GO:0031372)
0.0 0.2 GO:0044308 axonal spine(GO:0044308)
0.0 0.1 GO:0000308 cytoplasmic cyclin-dependent protein kinase holoenzyme complex(GO:0000308)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0019912 cyclin-dependent protein kinase activating kinase activity(GO:0019912)
0.0 0.1 GO:0099609 microtubule lateral binding(GO:0099609)
0.0 0.1 GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity(GO:0004616)
0.0 0.1 GO:0035368 selenocysteine insertion sequence binding(GO:0035368)
0.0 0.1 GO:1990460 leptin receptor binding(GO:1990460)