ISMARA results: CUX1

Project

avrg: SARS-CoV-2 Analysis Results (GEO series: GSE147507)

Navigation

Downloads

Results for CUX1

Z-value: 2.55

Motif logo

Transcription factors associated with CUX1

Gene Symbol	Gene ID	Gene Info
CUX1 Ensembl NCBI GeneCards UniProt	ENSG00000257923.5	cut like homeobox 1

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
CUX1	hg19_v2_chr7_+_101459263_101459310	-0.73	2.8e-04	Click!

Activity profile of CUX1 motif

Sorted Z-values of CUX1 motif

No targets for CUX1

Network of associatons between targets according to the STRING database.

First level regulatory network of CUX1

View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.6	14.0	GO:0090026	positive regulation of monocyte chemotaxis(GO:0090026)
1.0	12.4	GO:0070487	monocyte aggregation(GO:0070487)
1.0	8.2	GO:0051121	hepoxilin metabolic process(GO:0051121) hepoxilin biosynthetic process(GO:0051122)
0.4	7.9	GO:0016540	protein autoprocessing(GO:0016540)
0.2	7.4	GO:0061436	establishment of skin barrier(GO:0061436)
0.4	7.3	GO:0015816	glycine transport(GO:0015816)
0.2	6.6	GO:0031581	hemidesmosome assembly(GO:0031581)
0.4	6.5	GO:0032966	negative regulation of collagen biosynthetic process(GO:0032966)
1.0	6.2	GO:0051673	membrane disruption in other organism(GO:0051673)
0.1	6.0	GO:0018149	peptide cross-linking(GO:0018149)

Showing 1 to 10 of 253 entries

Gene overrepresentation in cellular_component category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	15.1	GO:0016604	nuclear body(GO:0016604)
0.2	11.5	GO:0001533	cornified envelope(GO:0001533)
0.1	8.2	GO:0046658	anchored component of plasma membrane(GO:0046658)
0.0	7.7	GO:0030176	integral component of endoplasmic reticulum membrane(GO:0030176)
0.1	7.0	GO:0030670	phagocytic vesicle membrane(GO:0030670)
0.6	6.7	GO:0005610	laminin-5 complex(GO:0005610)
0.8	6.4	GO:0035692	macrophage migration inhibitory factor receptor complex(GO:0035692)
0.2	5.4	GO:0043203	axon hillock(GO:0043203)
0.0	5.3	GO:0019898	extrinsic component of membrane(GO:0019898)
0.1	5.0	GO:0009925	basal plasma membrane(GO:0009925)

Showing 1 to 10 of 90 entries

Gene overrepresentation in molecular_function category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	13.4	GO:0042379	chemokine receptor binding(GO:0042379)
0.1	12.0	GO:0004867	serine-type endopeptidase inhibitor activity(GO:0004867)
0.1	10.0	GO:0017080	sodium channel regulator activity(GO:0017080)
2.1	8.2	GO:0016165	linoleate 13S-lipoxygenase activity(GO:0016165)
0.5	7.3	GO:0015187	glycine transmembrane transporter activity(GO:0015187)
0.2	7.2	GO:0005540	hyaluronic acid binding(GO:0005540)
0.0	7.0	GO:0019887	protein kinase regulator activity(GO:0019887)
0.4	6.2	GO:0042834	peptidoglycan binding(GO:0042834)
0.2	6.0	GO:0005149	interleukin-1 receptor binding(GO:0005149)
0.0	5.3	GO:0031490	chromatin DNA binding(GO:0031490)

Showing 1 to 10 of 177 entries

Gene overrepresentation in C2:CP category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	22.4	NABA SECRETED FACTORS	Genes encoding secreted soluble factors
0.4	12.4	SA MMP CYTOKINE CONNECTION	Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix.
0.0	11.5	NABA ECM REGULATORS	Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix
0.1	9.4	PID ALPHA SYNUCLEIN PATHWAY	Alpha-synuclein signaling
0.2	6.7	PID INTEGRIN4 PATHWAY	Alpha6 beta4 integrin-ligand interactions
0.1	5.8	PID INTEGRIN A9B1 PATHWAY	Alpha9 beta1 integrin signaling events
0.1	4.0	PID SYNDECAN 2 PATHWAY	Syndecan-2-mediated signaling events
0.1	3.8	PID RXR VDR PATHWAY	RXR and RAR heterodimerization with other nuclear receptor
0.0	3.2	SIG PIP3 SIGNALING IN CARDIAC MYOCTES	Genes related to PIP3 signaling in cardiac myocytes
0.1	3.1	PID IL8 CXCR2 PATHWAY	IL8- and CXCR2-mediated signaling events

Showing 1 to 10 of 42 entries

Gene overrepresentation in C2:CP:REACTOME category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	11.9	REACTOME CELL JUNCTION ORGANIZATION	Genes involved in Cell junction organization
0.1	6.8	REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE	Genes involved in Amino acid transport across the plasma membrane
0.3	6.4	REACTOME HYALURONAN UPTAKE AND DEGRADATION	Genes involved in Hyaluronan uptake and degradation
0.1	5.7	REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS	Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits
0.0	5.5	REACTOME GENERIC TRANSCRIPTION PATHWAY	Genes involved in Generic Transcription Pathway
0.0	4.9	REACTOME INTERFERON GAMMA SIGNALING	Genes involved in Interferon gamma signaling
0.3	4.7	REACTOME XENOBIOTICS	Genes involved in Xenobiotics
0.1	3.6	REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE	Genes involved in Sema4D induced cell migration and growth-cone collapse
0.1	3.4	REACTOME SIGNALING BY BMP	Genes involved in Signaling by BMP
0.1	3.3	REACTOME ACTIVATION OF RAC	Genes involved in Activation of Rac

Showing 1 to 10 of 64 entries

Results for CUX1

Z-value: 2.55

Motif logo

Transcription factors associated with CUX1

Activity-expression correlation:

Activity profile of CUX1 motif

Sorted Z-values of CUX1 motif

No targets for CUX1

Network of associatons between targets according to the STRING database.

First level regulatory network of CUX1

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Gene overrepresentation in cellular_component category:

Gene overrepresentation in molecular_function category:

Gene overrepresentation in C2:CP category:

Gene overrepresentation in C2:CP:REACTOME category: