avrg: SARS-CoV-2 Analysis Results (GEO series: GSE147507)

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Name	miRBASE accession
hsa-miR-194-5p Links miRBase	MIMAT0000460

View svg image
View png image

Gene overrepresentation in biological_process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.3	0.8	GO:0002605	negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II(GO:0002581) negative regulation of dendritic cell antigen processing and presentation(GO:0002605) negative regulation of endothelial cell chemotaxis(GO:2001027)
0.1	0.9	GO:0060671	epithelial cell differentiation involved in embryonic placenta development(GO:0060671) epithelial cell morphogenesis involved in placental branching(GO:0060672)
0.1	0.6	GO:0060266	negative regulation of respiratory burst involved in inflammatory response(GO:0060266)
0.1	0.6	GO:0051541	elastin metabolic process(GO:0051541)
0.1	0.5	GO:1903553	positive regulation of extracellular exosome assembly(GO:1903553)
0.1	0.3	GO:0048007	synaptic vesicle recycling via endosome(GO:0036466) antigen processing and presentation of lipid antigen via MHC class Ib(GO:0048003) antigen processing and presentation, exogenous lipid antigen via MHC class Ib(GO:0048007)
0.1	0.4	GO:0009956	radial pattern formation(GO:0009956)
0.1	0.6	GO:0061343	cell adhesion involved in heart morphogenesis(GO:0061343)
0.1	0.3	GO:0033025	mast cell homeostasis(GO:0033023) mast cell apoptotic process(GO:0033024) regulation of mast cell apoptotic process(GO:0033025) regulation of mast cell proliferation(GO:0070666) positive regulation of mast cell proliferation(GO:0070668)
0.1	0.3	GO:1902534	single-organism membrane invagination(GO:1902534)
0.1	0.2	GO:0045210	FasL biosynthetic process(GO:0045210)
0.1	1.0	GO:0010839	negative regulation of keratinocyte proliferation(GO:0010839)
0.1	0.2	GO:0060743	epithelial cell maturation involved in prostate gland development(GO:0060743)
0.0	0.2	GO:0042796	snRNA transcription from RNA polymerase III promoter(GO:0042796)
0.0	0.1	GO:0019858	cytosine metabolic process(GO:0019858)
0.0	0.3	GO:0051684	maintenance of Golgi location(GO:0051684)
0.0	0.1	GO:0002184	cytoplasmic translational termination(GO:0002184)
0.0	0.7	GO:0043374	CD8-positive, alpha-beta T cell differentiation(GO:0043374)
0.0	0.1	GO:0071109	superior temporal gyrus development(GO:0071109)
0.0	0.2	GO:0042539	hypotonic salinity response(GO:0042539) cellular hypotonic salinity response(GO:0071477)
0.0	0.1	GO:0002101	tRNA wobble cytosine modification(GO:0002101)
0.0	0.1	GO:1901165	positive regulation of trophoblast cell migration(GO:1901165)
0.0	0.3	GO:1901314	negative regulation of histone ubiquitination(GO:0033183) regulation of histone H2A K63-linked ubiquitination(GO:1901314) negative regulation of histone H2A K63-linked ubiquitination(GO:1901315)
0.0	0.3	GO:0000055	ribosomal large subunit export from nucleus(GO:0000055)
0.0	0.1	GO:0060382	regulation of DNA strand elongation(GO:0060382)
0.0	0.2	GO:0033029	regulation of neutrophil apoptotic process(GO:0033029)
0.0	0.4	GO:0010944	negative regulation of transcription by competitive promoter binding(GO:0010944)
0.0	0.2	GO:0072553	terminal button organization(GO:0072553)
0.0	0.3	GO:1901838	positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter(GO:1901838)
0.0	0.2	GO:0060449	bud elongation involved in lung branching(GO:0060449)
0.0	0.1	GO:2000312	regulation of kainate selective glutamate receptor activity(GO:2000312)
0.0	0.2	GO:0046007	negative regulation of activated T cell proliferation(GO:0046007)
0.0	0.3	GO:2001224	positive regulation of neuron migration(GO:2001224)
0.0	0.1	GO:2000639	regulation of SREBP signaling pathway(GO:2000638) negative regulation of SREBP signaling pathway(GO:2000639)
0.0	0.1	GO:0070940	dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0	0.3	GO:0090557	establishment of endothelial intestinal barrier(GO:0090557)
0.0	0.1	GO:0097577	intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.0	0.1	GO:0022027	interkinetic nuclear migration(GO:0022027)

Gene overrepresentation in cellular_component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.8	GO:0005577	fibrinogen complex(GO:0005577)
0.0	0.4	GO:0097442	CA3 pyramidal cell dendrite(GO:0097442)
0.0	0.1	GO:0031372	UBC13-MMS2 complex(GO:0031372)
0.0	0.2	GO:0071149	TEAD-2-YAP complex(GO:0071149)
0.0	0.2	GO:0031592	centrosomal corona(GO:0031592)
0.0	0.1	GO:0018444	translation release factor complex(GO:0018444)
0.0	0.3	GO:0044666	MLL3/4 complex(GO:0044666)
0.0	0.3	GO:0030123	AP-3 adaptor complex(GO:0030123)
0.0	0.1	GO:0031251	PAN complex(GO:0031251)
0.0	0.1	GO:0016593	Cdc73/Paf1 complex(GO:0016593)
0.0	0.7	GO:0043034	costamere(GO:0043034)
0.0	0.1	GO:0044326	dendritic spine neck(GO:0044326)

Gene overrepresentation in molecular_function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.8	GO:0070052	collagen V binding(GO:0070052)
0.1	0.3	GO:0005173	stem cell factor receptor binding(GO:0005173)
0.1	0.5	GO:0043426	MRF binding(GO:0043426)
0.0	0.4	GO:0008467	[heparan sulfate]-glucosamine 3-sulfotransferase 1 activity(GO:0008467)
0.0	0.9	GO:0001161	intronic transcription regulatory region sequence-specific DNA binding(GO:0001161) intronic transcription regulatory region DNA binding(GO:0044213)
0.0	0.6	GO:0048273	mitogen-activated protein kinase p38 binding(GO:0048273)
0.0	0.5	GO:0070053	thrombospondin receptor activity(GO:0070053)
0.0	0.3	GO:0044547	DNA topoisomerase binding(GO:0044547)
0.0	0.6	GO:0045499	chemorepellent activity(GO:0045499)
0.0	0.6	GO:0002162	dystroglycan binding(GO:0002162)
0.0	0.1	GO:0016428	tRNA (cytosine-5-)-methyltransferase activity(GO:0016428)
0.0	0.1	GO:0042954	lipoprotein transporter activity(GO:0042954)
0.0	0.2	GO:0008440	inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440)
0.0	0.9	GO:0046875	ephrin receptor binding(GO:0046875)
0.0	0.2	GO:0004723	calcium-dependent protein serine/threonine phosphatase activity(GO:0004723)
0.0	0.0	GO:0033149	FFAT motif binding(GO:0033149)
0.0	0.1	GO:0003747	translation release factor activity(GO:0003747) translation termination factor activity(GO:0008079)
0.0	0.3	GO:0070411	I-SMAD binding(GO:0070411)
0.0	0.2	GO:0022820	potassium:chloride symporter activity(GO:0015379) potassium ion symporter activity(GO:0022820)
0.0	0.3	GO:0042800	histone methyltransferase activity (H3-K4 specific)(GO:0042800)

Gene overrepresentation in C2:CP category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	1.4	PID SYNDECAN 4 PATHWAY	Syndecan-4-mediated signaling events
0.0	0.6	PID ERBB NETWORK PATHWAY	ErbB receptor signaling network
0.0	0.2	ST PAC1 RECEPTOR PATHWAY	PAC1 Receptor Pathway
0.0	0.9	PID EPHRINB REV PATHWAY	Ephrin B reverse signaling

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.0	REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA	Genes involved in Circadian Repression of Expression by REV-ERBA
0.0	0.9	REACTOME HS GAG BIOSYNTHESIS	Genes involved in HS-GAG biosynthesis
0.0	0.7	REACTOME SHC1 EVENTS IN ERBB4 SIGNALING	Genes involved in SHC1 events in ERBB4 signaling
0.0	0.3	REACTOME TGF BETA RECEPTOR SIGNALING IN EMT EPITHELIAL TO MESENCHYMAL TRANSITION	Genes involved in TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)