avrg: SARS-CoV-2 Analysis Results (GEO series: GSE147507)

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Name	miRBASE accession
hsa-miR-223-3p Links miRBase	MIMAT0000280

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Gene overrepresentation in biological_process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0097051	establishment of protein localization to endoplasmic reticulum membrane(GO:0097051)
0.0	0.1	GO:2000687	negative regulation of rubidium ion transport(GO:2000681) negative regulation of rubidium ion transmembrane transporter activity(GO:2000687)
0.0	0.2	GO:0042414	epinephrine metabolic process(GO:0042414) cellular response to lead ion(GO:0071284)
0.0	0.1	GO:2001247	positive regulation of phosphatidylcholine biosynthetic process(GO:2001247)
0.0	0.2	GO:0035669	TRAM-dependent toll-like receptor signaling pathway(GO:0035668) TRAM-dependent toll-like receptor 4 signaling pathway(GO:0035669)
0.0	0.1	GO:0006667	sphinganine metabolic process(GO:0006667)
0.0	0.1	GO:0035521	monoubiquitinated histone deubiquitination(GO:0035521) monoubiquitinated histone H2A deubiquitination(GO:0035522)
0.0	0.1	GO:0060382	regulation of DNA strand elongation(GO:0060382)
0.0	0.2	GO:2000234	positive regulation of ribosome biogenesis(GO:0090070) positive regulation of rRNA processing(GO:2000234)
0.0	0.2	GO:0031642	negative regulation of myelination(GO:0031642)
0.0	0.3	GO:0045602	negative regulation of endothelial cell differentiation(GO:0045602)
0.0	0.6	GO:0051988	regulation of attachment of spindle microtubules to kinetochore(GO:0051988)
0.0	0.3	GO:0031339	negative regulation of vesicle fusion(GO:0031339)
0.0	0.2	GO:0045204	MAPK export from nucleus(GO:0045204)
0.0	0.2	GO:0044339	canonical Wnt signaling pathway involved in osteoblast differentiation(GO:0044339)
0.0	0.2	GO:0051461	positive regulation of corticotropin secretion(GO:0051461)
0.0	0.2	GO:1902739	interferon-alpha secretion(GO:0072642) regulation of interferon-alpha secretion(GO:1902739) positive regulation of interferon-alpha secretion(GO:1902741)
0.0	0.4	GO:0031584	activation of phospholipase D activity(GO:0031584)
0.0	0.2	GO:0021592	fourth ventricle development(GO:0021592)
0.0	0.1	GO:0035063	nuclear speck organization(GO:0035063)
0.0	0.1	GO:0045925	positive regulation of female receptivity(GO:0045925) cellular response to Thyroglobulin triiodothyronine(GO:1904017)
0.0	0.2	GO:0010265	SCF complex assembly(GO:0010265)
0.0	0.2	GO:0001768	establishment of T cell polarity(GO:0001768)
0.0	0.2	GO:0061087	positive regulation of histone H3-K27 methylation(GO:0061087)
0.0	0.1	GO:0043353	enucleate erythrocyte differentiation(GO:0043353)
0.0	0.1	GO:2000374	regulation of oxygen metabolic process(GO:2000374)
0.0	0.1	GO:0002514	B cell tolerance induction(GO:0002514) regulation of B cell tolerance induction(GO:0002661) positive regulation of B cell tolerance induction(GO:0002663)
0.0	0.2	GO:0016191	synaptic vesicle uncoating(GO:0016191)
0.0	0.2	GO:0070601	centromeric sister chromatid cohesion(GO:0070601)
0.0	0.2	GO:0018206	peptidyl-methionine modification(GO:0018206)
0.0	0.2	GO:1990416	cellular response to brain-derived neurotrophic factor stimulus(GO:1990416)
0.0	0.1	GO:0006686	sphingomyelin biosynthetic process(GO:0006686)
0.0	0.1	GO:0070358	actin polymerization-dependent cell motility(GO:0070358)
0.0	0.2	GO:0033629	negative regulation of cell adhesion mediated by integrin(GO:0033629)
0.0	0.2	GO:0051256	mitotic spindle midzone assembly(GO:0051256)
0.0	0.2	GO:0000338	protein deneddylation(GO:0000338)
0.0	0.2	GO:0045198	establishment of epithelial cell apical/basal polarity(GO:0045198)
0.0	0.0	GO:0048633	positive regulation of skeletal muscle tissue growth(GO:0048633)
0.0	0.1	GO:0061470	T follicular helper cell differentiation(GO:0061470)
0.0	0.1	GO:0032237	activation of store-operated calcium channel activity(GO:0032237) positive regulation of store-operated calcium channel activity(GO:1901341)
0.0	0.1	GO:0060979	vasculogenesis involved in coronary vascular morphogenesis(GO:0060979)

Gene overrepresentation in cellular_component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.5	GO:0097149	centralspindlin complex(GO:0097149)
0.0	0.2	GO:0071458	integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458)
0.0	0.2	GO:0097513	myosin II filament(GO:0097513)
0.0	0.2	GO:0031415	NatA complex(GO:0031415)
0.0	0.2	GO:0072669	tRNA-splicing ligase complex(GO:0072669)
0.0	0.1	GO:0071598	neuronal ribonucleoprotein granule(GO:0071598)
0.0	0.2	GO:0051286	cell tip(GO:0051286)
0.0	0.1	GO:0032593	insulin-responsive compartment(GO:0032593)
0.0	0.4	GO:0097431	mitotic spindle pole(GO:0097431)
0.0	0.2	GO:0035631	CD40 receptor complex(GO:0035631)
0.0	0.1	GO:0032541	cortical endoplasmic reticulum(GO:0032541)
0.0	0.2	GO:1990909	Wnt signalosome(GO:1990909)

Gene overrepresentation in molecular_function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0005010	insulin-like growth factor-activated receptor activity(GO:0005010)
0.1	0.2	GO:0004676	3-phosphoinositide-dependent protein kinase activity(GO:0004676)
0.1	0.2	GO:0004421	hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.1	0.2	GO:0004119	cGMP-inhibited cyclic-nucleotide phosphodiesterase activity(GO:0004119)
0.0	0.4	GO:0031752	D5 dopamine receptor binding(GO:0031752)
0.0	0.2	GO:0001069	regulatory region RNA binding(GO:0001069)
0.0	0.2	GO:0016532	superoxide dismutase copper chaperone activity(GO:0016532) copper-dependent protein binding(GO:0032767)
0.0	0.2	GO:0008384	IkappaB kinase activity(GO:0008384)
0.0	0.2	GO:0042500	aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0	0.4	GO:0001135	transcription factor activity, RNA polymerase II transcription factor recruiting(GO:0001135)
0.0	0.2	GO:0035368	selenocysteine insertion sequence binding(GO:0035368)
0.0	0.1	GO:0000822	inositol hexakisphosphate binding(GO:0000822)
0.0	0.1	GO:0047493	sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493)
0.0	0.2	GO:0042608	T cell receptor binding(GO:0042608)
0.0	0.2	GO:0030911	TPR domain binding(GO:0030911)
0.0	0.1	GO:0032184	SUMO polymer binding(GO:0032184)
0.0	0.1	GO:0004758	serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454)
0.0	0.1	GO:0030628	pre-mRNA 3'-splice site binding(GO:0030628)
0.0	0.1	GO:0005026	transforming growth factor beta receptor activity, type II(GO:0005026)
0.0	0.2	GO:0052629	phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0	0.1	GO:0004699	calcium-independent protein kinase C activity(GO:0004699)
0.0	0.2	GO:0019870	potassium channel inhibitor activity(GO:0019870)
0.0	0.2	GO:0004596	peptide alpha-N-acetyltransferase activity(GO:0004596)

Gene overrepresentation in C2:CP category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.4	PID THROMBIN PAR4 PATHWAY	PAR4-mediated thrombin signaling events
0.0	0.1	PID IL8 CXCR1 PATHWAY	IL8- and CXCR1-mediated signaling events

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	REACTOME SYNTHESIS OF PIPS AT THE LATE ENDOSOME MEMBRANE	Genes involved in Synthesis of PIPs at the late endosome membrane
0.0	0.3	REACTOME IKK COMPLEX RECRUITMENT MEDIATED BY RIP1	Genes involved in IKK complex recruitment mediated by RIP1