ISMARA results: HOXA4

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avrg: SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for HOXA4

Z-value: 0.61

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Transcription factors associated with HOXA4

Gene Symbol	Gene ID	Gene Info
HOXA4 Ensembl NCBI GeneCards UniProt	ENSG00000197576.9	homeobox A4

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
HOXA4	hg19_v2_chr7_-_27170352_27170418	0.16	5.0e-01	Click!

Activity profile of HOXA4 motif

Sorted Z-values of HOXA4 motif

No targets for HOXA4

Network of associatons between targets according to the STRING database.

First level regulatory network of HOXA4

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.4	GO:0035855	megakaryocyte development(GO:0035855)
0.0	0.4	GO:0031581	hemidesmosome assembly(GO:0031581)
0.1	0.3	GO:1902362	melanocyte apoptotic process(GO:1902362)
0.0	0.3	GO:0098532	histone H3-K27 trimethylation(GO:0098532)
0.0	0.3	GO:0021759	globus pallidus development(GO:0021759)
0.0	0.2	GO:1902725	negative regulation of skeletal muscle cell proliferation(GO:0014859) negative regulation of skeletal muscle satellite cell proliferation(GO:1902723) negative regulation of satellite cell differentiation(GO:1902725)
0.0	0.2	GO:0002036	regulation of L-glutamate transport(GO:0002036)
0.0	0.2	GO:2001214	positive regulation of vasculogenesis(GO:2001214)
0.0	0.1	GO:0090526	regulation of gluconeogenesis involved in cellular glucose homeostasis(GO:0090526)
0.0	0.1	GO:0042214	terpene metabolic process(GO:0042214)

Showing 1 to 10 of 20 entries

Gene overrepresentation in cellular_component category:

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Total log-likelihood	Term	Description
0.4	GO:0030056	hemidesmosome(GO:0030056)
0.3	GO:0071438	invadopodium membrane(GO:0071438)
0.2	GO:0031466	Cul5-RING ubiquitin ligase complex(GO:0031466)
0.2	GO:0005750	mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.1	GO:0034365	discoidal high-density lipoprotein particle(GO:0034365)
0.1	GO:1990316	ATG1/ULK1 kinase complex(GO:1990316)

Showing 1 to 6 of 6 entries

Gene overrepresentation in molecular_function category:

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Total log-likelihood	Term	Description
0.3	GO:0044213	intronic transcription regulatory region sequence-specific DNA binding(GO:0001161) intronic transcription regulatory region DNA binding(GO:0044213)
0.3	GO:0008239	dipeptidyl-peptidase activity(GO:0008239)
0.2	GO:0070700	BMP receptor binding(GO:0070700)
0.2	GO:0004185	serine-type carboxypeptidase activity(GO:0004185)
0.1	GO:0070326	very-low-density lipoprotein particle receptor binding(GO:0070326)
0.1	GO:0070728	leucine binding(GO:0070728)
0.1	GO:0010861	thyroid hormone receptor activator activity(GO:0010861) thyroid hormone receptor coactivator activity(GO:0030375)

Showing 1 to 7 of 7 entries

Gene overrepresentation in C2:CP:REACTOME category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION	Genes involved in Apoptosis induced DNA fragmentation

Showing 1 to 1 of 1 entries

Results for HOXA4

Z-value: 0.61

Motif logo

Transcription factors associated with HOXA4

Activity-expression correlation:

Activity profile of HOXA4 motif

Sorted Z-values of HOXA4 motif

No targets for HOXA4

Network of associatons between targets according to the STRING database.

First level regulatory network of HOXA4

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Gene overrepresentation in cellular_component category:

Gene overrepresentation in molecular_function category:

Gene overrepresentation in C2:CP:REACTOME category: