ISMARA results: HOXA6

Project

avrg: SARS-CoV-2 Analysis Results (GEO series: GSE147507)

Navigation

Downloads

Results for HOXA6

Z-value: 2.08

Motif logo

Transcription factors associated with HOXA6

Gene Symbol	Gene ID	Gene Info
HOXA6 Ensembl NCBI GeneCards UniProt	ENSG00000106006.6	homeobox A6

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
HOXA6	hg19_v2_chr7_-_27187393_27187393	0.76	1.1e-04	Click!

Activity profile of HOXA6 motif

Sorted Z-values of HOXA6 motif

No targets for HOXA6

Network of associatons between targets according to the STRING database.

First level regulatory network of HOXA6

View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
1.5	12.2	GO:0010159	specification of organ position(GO:0010159)
0.7	6.9	GO:0086024	adrenergic receptor signaling pathway involved in positive regulation of heart rate(GO:0086024)
2.0	5.9	GO:0046013	regulation of T cell homeostatic proliferation(GO:0046013)
0.3	5.4	GO:1990573	potassium ion import across plasma membrane(GO:1990573)
1.7	5.1	GO:0007412	axon target recognition(GO:0007412)
1.6	4.9	GO:0051795	positive regulation of catagen(GO:0051795) activation of meiosis(GO:0090427)
0.7	4.9	GO:0003150	muscular septum morphogenesis(GO:0003150)
1.6	4.8	GO:0035284	rhombomere 3 development(GO:0021569) central nervous system segmentation(GO:0035283) brain segmentation(GO:0035284)
0.3	4.8	GO:0001833	inner cell mass cell proliferation(GO:0001833)
0.2	4.8	GO:0021516	dorsal spinal cord development(GO:0021516)

Showing 1 to 10 of 108 entries

Gene overrepresentation in cellular_component category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	12.4	GO:0016604	nuclear body(GO:0016604)
0.0	8.0	GO:0005788	endoplasmic reticulum lumen(GO:0005788)
0.1	6.1	GO:0005891	voltage-gated calcium channel complex(GO:0005891)
0.2	5.4	GO:0005890	sodium:potassium-exchanging ATPase complex(GO:0005890)
0.1	5.1	GO:1904115	axon cytoplasm(GO:1904115)
0.0	4.8	GO:0000792	heterochromatin(GO:0000792)
0.5	4.3	GO:0005579	membrane attack complex(GO:0005579)
0.0	4.2	GO:0016323	basolateral plasma membrane(GO:0016323)
0.0	4.0	GO:0001650	fibrillar center(GO:0001650)
0.0	3.8	GO:0030669	clathrin-coated endocytic vesicle membrane(GO:0030669)

Showing 1 to 10 of 36 entries

Gene overrepresentation in molecular_function category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	13.6	GO:0001227	transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.4	8.7	GO:0031698	beta-2 adrenergic receptor binding(GO:0031698)
0.1	8.6	GO:0001205	transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001205)
0.2	6.8	GO:0071837	HMG box domain binding(GO:0071837)
0.5	6.5	GO:0070700	BMP receptor binding(GO:0070700)
0.0	5.5	GO:0005179	hormone activity(GO:0005179)
0.3	5.4	GO:0005391	sodium:potassium-exchanging ATPase activity(GO:0005391)
1.3	5.1	GO:0031694	alpha-2A adrenergic receptor binding(GO:0031694)
0.2	4.9	GO:0042813	Wnt-activated receptor activity(GO:0042813)
0.1	4.3	GO:0004115	3',5'-cyclic-AMP phosphodiesterase activity(GO:0004115)

Showing 1 to 10 of 62 entries

Gene overrepresentation in C2:CP category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	6.9	PID BMP PATHWAY	BMP receptor signaling
0.1	5.1	PID ALPHA SYNUCLEIN PATHWAY	Alpha-synuclein signaling
0.0	4.2	PID ERBB4 PATHWAY	ErbB4 signaling events
0.1	3.8	PID WNT SIGNALING PATHWAY	Wnt signaling network
0.0	3.5	PID MYC ACTIV PATHWAY	Validated targets of C-MYC transcriptional activation
0.1	3.3	PID P38 ALPHA BETA PATHWAY	Regulation of p38-alpha and p38-beta
0.0	2.9	NABA PROTEOGLYCANS	Genes encoding proteoglycans
0.0	2.9	PID SHP2 PATHWAY	SHP2 signaling
0.0	2.7	PID P75 NTR PATHWAY	p75(NTR)-mediated signaling
0.0	2.5	PID P38 MK2 PATHWAY	p38 signaling mediated by MAPKAP kinases

Showing 1 to 10 of 21 entries

Gene overrepresentation in C2:CP:REACTOME category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	7.3	REACTOME DARPP 32 EVENTS	Genes involved in DARPP-32 events
0.0	5.0	REACTOME SIGNALING BY RHO GTPASES	Genes involved in Signaling by Rho GTPases
0.1	4.3	REACTOME COMPLEMENT CASCADE	Genes involved in Complement cascade
0.1	4.3	REACTOME ION TRANSPORT BY P TYPE ATPASES	Genes involved in Ion transport by P-type ATPases
0.0	4.3	REACTOME G ALPHA S SIGNALLING EVENTS	Genes involved in G alpha (s) signalling events
0.2	3.7	REACTOME ACYL CHAIN REMODELLING OF PG	Genes involved in Acyl chain remodelling of PG
0.1	3.6	REACTOME SYNTHESIS SECRETION AND INACTIVATION OF GIP	Genes involved in Synthesis, Secretion, and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)
0.0	3.2	REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS	Genes involved in Class B/2 (Secretin family receptors)
0.0	2.7	REACTOME VOLTAGE GATED POTASSIUM CHANNELS	Genes involved in Voltage gated Potassium channels
0.0	2.7	REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY	Genes involved in Nuclear Receptor transcription pathway

Showing 1 to 10 of 31 entries

Results for HOXA6

Z-value: 2.08

Motif logo

Transcription factors associated with HOXA6

Activity-expression correlation:

Activity profile of HOXA6 motif

Sorted Z-values of HOXA6 motif

No targets for HOXA6

Network of associatons between targets according to the STRING database.

First level regulatory network of HOXA6

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Gene overrepresentation in cellular_component category:

Gene overrepresentation in molecular_function category:

Gene overrepresentation in C2:CP category:

Gene overrepresentation in C2:CP:REACTOME category: