avrg: SARS-CoV-2 Analysis Results (GEO series: GSE147507)

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
NKX1-1 Links Ensembl NCBI GeneCards UniProt	ENSG00000235608.1	NK1 homeobox 1

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Gene overrepresentation in biological_process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.4	1.2	GO:0009786	regulation of asymmetric cell division(GO:0009786)
0.3	1.5	GO:0061030	epithelial cell differentiation involved in mammary gland alveolus development(GO:0061030)
0.3	0.8	GO:0071449	cellular response to lipid hydroperoxide(GO:0071449)
0.1	0.4	GO:0060829	regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation(GO:0060827) negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation(GO:0060829)
0.1	0.5	GO:0050993	dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.1	1.4	GO:2000042	negative regulation of double-strand break repair via homologous recombination(GO:2000042)
0.1	0.6	GO:0043988	histone H3-S28 phosphorylation(GO:0043988)
0.1	0.9	GO:0018211	protein C-linked glycosylation(GO:0018103) peptidyl-tryptophan modification(GO:0018211) protein C-linked glycosylation via tryptophan(GO:0018317) protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan(GO:0018406)
0.1	0.2	GO:0051758	homologous chromosome movement towards spindle pole involved in homologous chromosome segregation(GO:0051758)
0.1	0.3	GO:0034959	substance P catabolic process(GO:0010814) calcitonin catabolic process(GO:0010816) endothelin maturation(GO:0034959)
0.0	0.1	GO:1903630	regulation of aminoacyl-tRNA ligase activity(GO:1903630)
0.0	0.1	GO:0090402	oncogene-induced cell senescence(GO:0090402)
0.0	0.4	GO:0051256	mitotic spindle midzone assembly(GO:0051256)
0.0	0.3	GO:0033314	mitotic DNA replication checkpoint(GO:0033314)
0.0	0.4	GO:0046085	adenosine metabolic process(GO:0046085)
0.0	0.1	GO:1903719	regulation of I-kappaB phosphorylation(GO:1903719) positive regulation of I-kappaB phosphorylation(GO:1903721)
0.0	0.8	GO:0071539	protein localization to centrosome(GO:0071539)
0.0	0.3	GO:0090160	Golgi to lysosome transport(GO:0090160)
0.0	0.2	GO:0071394	cellular response to testosterone stimulus(GO:0071394)
0.0	0.1	GO:0051970	negative regulation of transmission of nerve impulse(GO:0051970)
0.0	0.3	GO:0034587	piRNA metabolic process(GO:0034587)
0.0	0.2	GO:0008343	adult feeding behavior(GO:0008343)
0.0	0.1	GO:0032020	ISG15-protein conjugation(GO:0032020)
0.0	0.2	GO:0030321	transepithelial chloride transport(GO:0030321)
0.0	0.1	GO:0071395	response to jasmonic acid(GO:0009753) cellular response to jasmonic acid stimulus(GO:0071395)
0.0	0.7	GO:0071431	tRNA export from nucleus(GO:0006409) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.0	0.7	GO:0070979	protein K11-linked ubiquitination(GO:0070979)
0.0	0.6	GO:0006506	GPI anchor biosynthetic process(GO:0006506)

Gene overrepresentation in cellular_component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.5	GO:0071547	piP-body(GO:0071547)
0.1	1.2	GO:0072687	meiotic spindle(GO:0072687)
0.1	0.6	GO:0032133	chromosome passenger complex(GO:0032133)
0.1	0.8	GO:0031313	extrinsic component of endosome membrane(GO:0031313)
0.1	0.3	GO:0031302	intrinsic component of endosome membrane(GO:0031302)
0.0	0.6	GO:0000506	glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex(GO:0000506)
0.0	0.4	GO:0060091	kinocilium(GO:0060091)
0.0	0.1	GO:0097057	TRAF2-GSTP1 complex(GO:0097057)
0.0	0.5	GO:0000940	condensed chromosome outer kinetochore(GO:0000940)
0.0	0.3	GO:0046581	intercellular canaliculus(GO:0046581)
0.0	0.3	GO:0031080	nuclear pore outer ring(GO:0031080)
0.0	0.5	GO:0005680	anaphase-promoting complex(GO:0005680)
0.0	0.1	GO:0035985	senescence-associated heterochromatin focus(GO:0035985)
0.0	0.2	GO:0001518	voltage-gated sodium channel complex(GO:0001518)

Gene overrepresentation in molecular_function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.7	GO:0004157	dihydropyrimidinase activity(GO:0004157)
0.1	0.5	GO:0004452	isopentenyl-diphosphate delta-isomerase activity(GO:0004452)
0.1	0.3	GO:0019781	NEDD8 activating enzyme activity(GO:0019781)
0.1	0.4	GO:0008665	2'-phosphotransferase activity(GO:0008665)
0.1	0.3	GO:0030292	protein tyrosine kinase inhibitor activity(GO:0030292)
0.1	0.6	GO:0035174	histone serine kinase activity(GO:0035174)
0.0	0.8	GO:0043295	glutathione binding(GO:0043295)
0.0	0.1	GO:0005174	CD40 receptor binding(GO:0005174)
0.0	0.8	GO:0000030	mannosyltransferase activity(GO:0000030)
0.0	0.2	GO:0045029	UDP-activated nucleotide receptor activity(GO:0045029)
0.0	0.1	GO:0047023	androsterone dehydrogenase activity(GO:0047023)
0.0	0.8	GO:0005545	1-phosphatidylinositol binding(GO:0005545)
0.0	0.3	GO:0017162	aryl hydrocarbon receptor binding(GO:0017162)
0.0	0.3	GO:0031957	very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.0	0.1	GO:0042296	ISG15 transferase activity(GO:0042296)

Gene overrepresentation in C2:CP category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	ST PHOSPHOINOSITIDE 3 KINASE PATHWAY	PI3K Pathway
0.0	1.5	PID HIF1 TFPATHWAY	HIF-1-alpha transcription factor network

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	1.2	REACTOME CONVERSION FROM APC C CDC20 TO APC C CDH1 IN LATE ANAPHASE	Genes involved in Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase
0.0	0.8	REACTOME GLUTATHIONE CONJUGATION	Genes involved in Glutathione conjugation
0.0	0.7	REACTOME CRMPS IN SEMA3A SIGNALING	Genes involved in CRMPs in Sema3A signaling
0.0	0.1	REACTOME APOBEC3G MEDIATED RESISTANCE TO HIV1 INFECTION	Genes involved in APOBEC3G mediated resistance to HIV-1 infection