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avrg: SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for OTX2_CRX

Z-value: 0.91

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Transcription factors associated with OTX2_CRX

Gene Symbol Gene ID Gene Info
ENSG00000165588.12 orthodenticle homeobox 2
ENSG00000105392.11 cone-rod homeobox

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
CRXhg19_v2_chr19_+_48325097_483252110.541.3e-02Click!

Activity profile of OTX2_CRX motif

Sorted Z-values of OTX2_CRX motif

Network of associatons between targets according to the STRING database.

First level regulatory network of OTX2_CRX

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.8 GO:0061143 alveolar primary septum development(GO:0061143)
0.3 1.1 GO:1990637 response to prolactin(GO:1990637)
0.2 2.4 GO:0032286 central nervous system myelin maintenance(GO:0032286)
0.2 0.7 GO:0032072 plasmacytoid dendritic cell activation(GO:0002270) regulation of restriction endodeoxyribonuclease activity(GO:0032072)
0.2 1.0 GO:0006420 arginyl-tRNA aminoacylation(GO:0006420)
0.2 0.5 GO:0021650 vestibulocochlear nerve formation(GO:0021650) regulation of metanephros size(GO:0035566)
0.2 0.5 GO:0061074 regulation of neural retina development(GO:0061074)
0.2 1.1 GO:1903281 protein transport into plasma membrane raft(GO:0044861) positive regulation of calcium:sodium antiporter activity(GO:1903281) positive regulation of potassium ion import(GO:1903288)
0.1 1.4 GO:0030450 regulation of complement activation, classical pathway(GO:0030450) negative regulation of complement activation, classical pathway(GO:0045959)
0.1 3.6 GO:0021516 dorsal spinal cord development(GO:0021516)
0.1 1.0 GO:0007386 compartment pattern specification(GO:0007386)
0.1 0.9 GO:2000048 negative regulation of cell-cell adhesion mediated by cadherin(GO:2000048)
0.1 0.5 GO:0030821 negative regulation of cyclic nucleotide catabolic process(GO:0030806) negative regulation of cAMP catabolic process(GO:0030821) negative regulation of purine nucleotide catabolic process(GO:0033122)
0.1 0.8 GO:0046532 regulation of photoreceptor cell differentiation(GO:0046532)
0.1 2.4 GO:0071420 cellular response to histamine(GO:0071420)
0.1 0.7 GO:0030538 embryonic genitalia morphogenesis(GO:0030538)
0.1 2.4 GO:0035641 locomotory exploration behavior(GO:0035641)
0.1 0.5 GO:0061743 motor learning(GO:0061743)
0.1 0.4 GO:1903722 regulation of centriole elongation(GO:1903722)
0.1 0.4 GO:0032053 ciliary basal body organization(GO:0032053) positive regulation of protein localization to cilium(GO:1903566)
0.1 1.3 GO:0018298 protein-chromophore linkage(GO:0018298)
0.1 0.4 GO:0044537 regulation of circulating fibrinogen levels(GO:0044537)
0.1 0.3 GO:2000824 negative regulation of androgen receptor activity(GO:2000824)
0.1 0.4 GO:0001831 trophectodermal cellular morphogenesis(GO:0001831)
0.1 0.3 GO:0045726 positive regulation of integrin biosynthetic process(GO:0045726)
0.1 1.4 GO:0014029 neural crest formation(GO:0014029)
0.1 1.3 GO:0046085 adenosine metabolic process(GO:0046085)
0.1 0.2 GO:2000646 positive regulation of receptor catabolic process(GO:2000646)
0.1 0.5 GO:0046985 positive regulation of hemoglobin biosynthetic process(GO:0046985)
0.1 0.8 GO:0097105 presynaptic membrane assembly(GO:0097105)
0.1 0.8 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560)
0.1 0.2 GO:1900365 positive regulation of mRNA polyadenylation(GO:1900365)
0.1 1.0 GO:0035372 protein localization to microtubule(GO:0035372)
0.1 1.7 GO:0001502 cartilage condensation(GO:0001502)
0.1 0.5 GO:1990034 cellular response to corticosterone stimulus(GO:0071386) calcium ion export from cell(GO:1990034)
0.1 0.2 GO:1902866 regulation of retina development in camera-type eye(GO:1902866)
0.1 0.3 GO:1901631 positive regulation of presynaptic membrane organization(GO:1901631) positive regulation of synaptic vesicle clustering(GO:2000809)
0.1 0.2 GO:0071393 cellular response to progesterone stimulus(GO:0071393)
0.1 0.5 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.0 0.7 GO:0030321 transepithelial chloride transport(GO:0030321)
0.0 0.8 GO:0006527 arginine catabolic process(GO:0006527)
0.0 0.4 GO:0086024 adrenergic receptor signaling pathway involved in positive regulation of heart rate(GO:0086024)
0.0 0.9 GO:0051014 actin filament severing(GO:0051014)
0.0 0.1 GO:1903980 negative regulation of macrophage colony-stimulating factor signaling pathway(GO:1902227) negative regulation of response to macrophage colony-stimulating factor(GO:1903970) negative regulation of cellular response to macrophage colony-stimulating factor stimulus(GO:1903973) positive regulation of microglial cell activation(GO:1903980)
0.0 0.2 GO:0070171 negative regulation of tooth mineralization(GO:0070171)
0.0 0.2 GO:0042699 follicle-stimulating hormone signaling pathway(GO:0042699)
0.0 0.3 GO:2000189 positive regulation of cholesterol homeostasis(GO:2000189)
0.0 0.2 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.0 0.3 GO:0031339 negative regulation of vesicle fusion(GO:0031339)
0.0 0.3 GO:0002088 lens development in camera-type eye(GO:0002088)
0.0 0.2 GO:0051056 regulation of small GTPase mediated signal transduction(GO:0051056)
0.0 0.4 GO:0036066 protein O-linked fucosylation(GO:0036066)
0.0 0.3 GO:0097500 receptor localization to nonmotile primary cilium(GO:0097500)
0.0 0.2 GO:0015722 canalicular bile acid transport(GO:0015722) pyrimidine nucleobase transport(GO:0015855) purine nucleobase transmembrane transport(GO:1904823)
0.0 0.7 GO:1900745 positive regulation of p38MAPK cascade(GO:1900745)
0.0 0.6 GO:0051256 mitotic spindle midzone assembly(GO:0051256)
0.0 0.5 GO:0015825 L-serine transport(GO:0015825)
0.0 1.1 GO:0035162 embryonic hemopoiesis(GO:0035162)
0.0 0.1 GO:2000312 regulation of kainate selective glutamate receptor activity(GO:2000312)
0.0 0.2 GO:0048733 sebaceous gland development(GO:0048733)
0.0 0.3 GO:0019367 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.0 0.2 GO:0044800 fusion of virus membrane with host plasma membrane(GO:0019064) membrane fusion involved in viral entry into host cell(GO:0039663) multi-organism membrane fusion(GO:0044800)
0.0 0.4 GO:0015727 lactate transport(GO:0015727) lactate transmembrane transport(GO:0035873)
0.0 2.3 GO:0032981 NADH dehydrogenase complex assembly(GO:0010257) mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 1.4 GO:0010107 potassium ion import(GO:0010107)
0.0 0.4 GO:1901386 negative regulation of voltage-gated calcium channel activity(GO:1901386)
0.0 0.3 GO:0060348 bone development(GO:0060348)
0.0 0.3 GO:0071286 cellular response to magnesium ion(GO:0071286)
0.0 0.1 GO:0035690 cellular response to drug(GO:0035690)
0.0 0.2 GO:0001714 endodermal cell fate specification(GO:0001714)
0.0 0.1 GO:0046340 diacylglycerol catabolic process(GO:0046340)
0.0 0.9 GO:0042462 eye photoreceptor cell development(GO:0042462)
0.0 0.2 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.0 0.1 GO:0009405 pathogenesis(GO:0009405)
0.0 0.1 GO:2000686 regulation of rubidium ion transmembrane transporter activity(GO:2000686)
0.0 0.1 GO:0002326 B cell lineage commitment(GO:0002326)
0.0 0.2 GO:0090267 positive regulation of mitotic cell cycle spindle assembly checkpoint(GO:0090267)
0.0 0.2 GO:1900747 negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747)
0.0 0.1 GO:0000432 regulation of transcription from RNA polymerase II promoter by glucose(GO:0000430) positive regulation of transcription from RNA polymerase II promoter by glucose(GO:0000432)
0.0 0.4 GO:0035414 negative regulation of catenin import into nucleus(GO:0035414)
0.0 0.1 GO:0031914 negative regulation of synaptic plasticity(GO:0031914)
0.0 0.2 GO:0035815 positive regulation of renal sodium excretion(GO:0035815)
0.0 0.1 GO:0000056 ribosomal small subunit export from nucleus(GO:0000056)
0.0 0.3 GO:0097352 autophagosome maturation(GO:0097352)
0.0 0.2 GO:0071787 endoplasmic reticulum tubular network assembly(GO:0071787)
0.0 0.5 GO:0060716 labyrinthine layer blood vessel development(GO:0060716)
0.0 0.1 GO:0007197 adenylate cyclase-inhibiting G-protein coupled acetylcholine receptor signaling pathway(GO:0007197)
0.0 0.1 GO:0046604 positive regulation of mitotic centrosome separation(GO:0046604)
0.0 0.2 GO:0060087 relaxation of vascular smooth muscle(GO:0060087)
0.0 0.1 GO:0015824 proline transport(GO:0015824)
0.0 0.3 GO:0043508 negative regulation of JUN kinase activity(GO:0043508)
0.0 0.3 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.9 GO:0016035 zeta DNA polymerase complex(GO:0016035)
0.1 1.1 GO:0098554 cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.1 0.5 GO:0042721 mitochondrial inner membrane protein insertion complex(GO:0042721)
0.1 0.7 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.1 0.3 GO:0032127 dense core granule membrane(GO:0032127) microvesicle(GO:1990742)
0.1 2.4 GO:1902711 GABA-A receptor complex(GO:1902711)
0.1 0.2 GO:0000813 ESCRT I complex(GO:0000813)
0.1 0.2 GO:1990666 PCSK9-LDLR complex(GO:1990666)
0.1 1.7 GO:0097381 photoreceptor disc membrane(GO:0097381)
0.0 0.1 GO:0005588 collagen type V trimer(GO:0005588)
0.0 0.9 GO:0032059 bleb(GO:0032059)
0.0 1.1 GO:0005890 sodium:potassium-exchanging ATPase complex(GO:0005890)
0.0 0.4 GO:0005827 polar microtubule(GO:0005827)
0.0 0.3 GO:0032444 activin responsive factor complex(GO:0032444)
0.0 0.2 GO:0089701 U2AF(GO:0089701)
0.0 0.3 GO:0036056 filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057)
0.0 0.1 GO:0097441 basilar dendrite(GO:0097441)
0.0 0.4 GO:0035253 ciliary rootlet(GO:0035253)
0.0 0.1 GO:0032279 asymmetric synapse(GO:0032279) symmetric synapse(GO:0032280)
0.0 0.6 GO:0008385 IkappaB kinase complex(GO:0008385)
0.0 0.4 GO:0000815 ESCRT III complex(GO:0000815)
0.0 0.5 GO:0032591 dendritic spine membrane(GO:0032591)
0.0 1.4 GO:0045171 intercellular bridge(GO:0045171)
0.0 0.3 GO:0071438 invadopodium membrane(GO:0071438)
0.0 0.3 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.0 0.1 GO:0044305 calyx of Held(GO:0044305)
0.0 0.3 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.7 GO:0005719 nuclear euchromatin(GO:0005719)
0.0 0.1 GO:0098839 postsynaptic density membrane(GO:0098839)
0.0 0.3 GO:0045277 respiratory chain complex IV(GO:0045277)
0.0 0.1 GO:0016589 NURF complex(GO:0016589)
0.0 0.2 GO:0034709 methylosome(GO:0034709)
0.0 0.2 GO:0005589 collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647)
0.0 0.4 GO:0030137 COPI-coated vesicle(GO:0030137)
0.0 0.5 GO:0090545 NuRD complex(GO:0016581) CHD-type complex(GO:0090545)
0.0 0.7 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 0.1 GO:0005642 annulate lamellae(GO:0005642)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.3 GO:0008665 2'-phosphotransferase activity(GO:0008665)
0.2 2.2 GO:0022851 GABA-gated chloride ion channel activity(GO:0022851)
0.2 1.0 GO:0004814 arginine-tRNA ligase activity(GO:0004814)
0.1 0.4 GO:0004947 bradykinin receptor activity(GO:0004947)
0.1 0.8 GO:0016403 dimethylargininase activity(GO:0016403)
0.1 1.3 GO:0008020 G-protein coupled photoreceptor activity(GO:0008020)
0.1 0.6 GO:1990450 linear polyubiquitin binding(GO:1990450)
0.1 0.7 GO:0010858 calcium-dependent protein kinase regulator activity(GO:0010858)
0.1 0.4 GO:0031208 POZ domain binding(GO:0031208)
0.1 0.8 GO:0005052 peroxisome matrix targeting signal-1 binding(GO:0005052)
0.1 0.3 GO:0048763 calcium-induced calcium release activity(GO:0048763)
0.1 0.2 GO:0031896 V2 vasopressin receptor binding(GO:0031896)
0.1 0.7 GO:0045029 UDP-activated nucleotide receptor activity(GO:0045029)
0.1 0.2 GO:0005275 amine transmembrane transporter activity(GO:0005275)
0.1 1.3 GO:0005522 profilin binding(GO:0005522)
0.1 0.4 GO:0005212 structural constituent of eye lens(GO:0005212)
0.1 2.8 GO:0051183 vitamin transporter activity(GO:0051183)
0.1 0.2 GO:0034189 very-low-density lipoprotein particle binding(GO:0034189) very-low-density lipoprotein particle receptor binding(GO:0070326)
0.1 1.3 GO:0015467 G-protein activated inward rectifier potassium channel activity(GO:0015467)
0.1 1.5 GO:0005112 Notch binding(GO:0005112)
0.1 0.3 GO:0070699 type II activin receptor binding(GO:0070699)
0.1 0.3 GO:0030171 voltage-gated proton channel activity(GO:0030171)
0.1 0.2 GO:0004886 9-cis retinoic acid receptor activity(GO:0004886)
0.1 1.1 GO:0005391 sodium:potassium-exchanging ATPase activity(GO:0005391)
0.0 0.5 GO:0070290 N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 0.5 GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity(GO:0035242)
0.0 0.9 GO:0008432 JUN kinase binding(GO:0008432)
0.0 0.4 GO:0030348 syntaxin-3 binding(GO:0030348)
0.0 0.8 GO:0043522 leucine zipper domain binding(GO:0043522)
0.0 0.2 GO:0004692 cGMP-dependent protein kinase activity(GO:0004692)
0.0 0.1 GO:0033878 hormone-sensitive lipase activity(GO:0033878)
0.0 0.5 GO:0031681 G-protein beta-subunit binding(GO:0031681)
0.0 0.3 GO:0005078 MAP-kinase scaffold activity(GO:0005078)
0.0 0.3 GO:0009922 fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.5 GO:0022889 L-serine transmembrane transporter activity(GO:0015194) serine transmembrane transporter activity(GO:0022889)
0.0 0.4 GO:0015129 lactate transmembrane transporter activity(GO:0015129)
0.0 0.2 GO:0016941 natriuretic peptide receptor activity(GO:0016941)
0.0 0.3 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.5 GO:0031545 peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.0 0.2 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
0.0 0.5 GO:0016175 superoxide-generating NADPH oxidase activity(GO:0016175)
0.0 0.2 GO:0008503 benzodiazepine receptor activity(GO:0008503)
0.0 0.2 GO:0045504 dynein heavy chain binding(GO:0045504)
0.0 1.4 GO:0001103 RNA polymerase II repressing transcription factor binding(GO:0001103)
0.0 0.5 GO:0042043 neurexin family protein binding(GO:0042043)
0.0 0.4 GO:0031698 beta-2 adrenergic receptor binding(GO:0031698)
0.0 0.2 GO:0032027 myosin light chain binding(GO:0032027)
0.0 1.0 GO:0046875 ephrin receptor binding(GO:0046875)
0.0 0.2 GO:0005542 folic acid binding(GO:0005542)
0.0 0.1 GO:0008454 alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0008454)
0.0 0.1 GO:0015272 ATP-activated inward rectifier potassium channel activity(GO:0015272)
0.0 0.6 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.0 0.1 GO:0005157 macrophage colony-stimulating factor receptor binding(GO:0005157)
0.0 0.1 GO:0016907 G-protein coupled acetylcholine receptor activity(GO:0016907)
0.0 1.2 GO:0030145 manganese ion binding(GO:0030145)
0.0 2.9 GO:0001078 transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078)
0.0 0.2 GO:0008140 cAMP response element binding protein binding(GO:0008140)
0.0 0.4 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.3 GO:0019992 diacylglycerol binding(GO:0019992)
0.0 0.4 GO:0031210 phosphatidylcholine binding(GO:0031210)
0.0 0.2 GO:0019966 interleukin-1 binding(GO:0019966)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.3 PID TOLL ENDOGENOUS PATHWAY Endogenous TLR signaling
0.0 1.4 PID CD40 PATHWAY CD40/CD40L signaling
0.0 0.8 PID RHODOPSIN PATHWAY Visual signal transduction: Rods
0.0 0.5 ST GA12 PATHWAY G alpha 12 Pathway
0.0 0.6 PID P38 MKK3 6PATHWAY p38 MAPK signaling pathway
0.0 1.1 PID AR NONGENOMIC PATHWAY Nongenotropic Androgen signaling
0.0 0.3 PID RAC1 PATHWAY RAC1 signaling pathway
0.0 1.5 PID NOTCH PATHWAY Notch signaling pathway
0.0 0.2 ST G ALPHA S PATHWAY G alpha s Pathway
0.0 0.4 PID WNT CANONICAL PATHWAY Canonical Wnt signaling pathway
0.0 1.2 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.0 1.8 PID SMAD2 3NUCLEAR PATHWAY Regulation of nuclear SMAD2/3 signaling
0.0 0.5 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.1 REACTOME HORMONE LIGAND BINDING RECEPTORS Genes involved in Hormone ligand-binding receptors
0.1 1.3 REACTOME OPSINS Genes involved in Opsins
0.1 2.4 REACTOME GABA A RECEPTOR ACTIVATION Genes involved in GABA A receptor activation
0.0 0.2 REACTOME BINDING AND ENTRY OF HIV VIRION Genes involved in Binding and entry of HIV virion
0.0 1.4 REACTOME REGULATION OF COMPLEMENT CASCADE Genes involved in Regulation of Complement cascade
0.0 0.4 REACTOME G BETA GAMMA SIGNALLING THROUGH PLC BETA Genes involved in G beta:gamma signalling through PLC beta
0.0 1.3 REACTOME RIP MEDIATED NFKB ACTIVATION VIA DAI Genes involved in RIP-mediated NFkB activation via DAI
0.0 0.7 REACTOME P2Y RECEPTORS Genes involved in P2Y receptors
0.0 1.4 REACTOME BASIGIN INTERACTIONS Genes involved in Basigin interactions
0.0 0.4 REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins
0.0 0.3 REACTOME RECEPTOR LIGAND BINDING INITIATES THE SECOND PROTEOLYTIC CLEAVAGE OF NOTCH RECEPTOR Genes involved in Receptor-ligand binding initiates the second proteolytic cleavage of Notch receptor
0.0 0.2 REACTOME PASSIVE TRANSPORT BY AQUAPORINS Genes involved in Passive Transport by Aquaporins
0.0 0.8 REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D Genes involved in Metabolism of steroid hormones and vitamins A and D
0.0 0.5 REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha
0.0 0.6 REACTOME KINESINS Genes involved in Kinesins
0.0 0.6 REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits
0.0 0.4 REACTOME ENDOSOMAL SORTING COMPLEX REQUIRED FOR TRANSPORT ESCRT Genes involved in Endosomal Sorting Complex Required For Transport (ESCRT)