avrg: SARS-CoV-2 Analysis Results (GEO series: GSE147507)

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
PRDM4 Links Ensembl NCBI GeneCards UniProt	ENSG00000110851.7	PR/SET domain 4

Gene	Promoter	Pearson corr. coef.	P-value	Plot
PRDM4	hg19_v2_chr12_-_108154925_108154945	-0.51	2.1e-02	Click!

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Gene overrepresentation in biological_process category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.3	6.7	GO:0060741	prostate gland stromal morphogenesis(GO:0060741)
0.6	1.7	GO:0061580	colon epithelial cell migration(GO:0061580)
0.4	1.1	GO:0001994	norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure(GO:0001994)
0.3	3.3	GO:0003150	muscular septum morphogenesis(GO:0003150)
0.2	2.2	GO:0001887	selenium compound metabolic process(GO:0001887)
0.1	0.5	GO:0042357	thiamine diphosphate metabolic process(GO:0042357)
0.1	0.3	GO:0051086	chaperone mediated protein folding independent of cofactor(GO:0051086)
0.1	0.5	GO:0090341	negative regulation of secretion of lysosomal enzymes(GO:0090341)
0.1	0.2	GO:0036058	filtration diaphragm assembly(GO:0036058) slit diaphragm assembly(GO:0036060)
0.1	1.7	GO:0046339	diacylglycerol metabolic process(GO:0046339)
0.0	0.2	GO:0051598	meiotic recombination checkpoint(GO:0051598)
0.0	0.5	GO:0097500	receptor localization to nonmotile primary cilium(GO:0097500)
0.0	0.6	GO:0006621	protein retention in ER lumen(GO:0006621)
0.0	0.1	GO:0002337	B-1a B cell differentiation(GO:0002337)
0.0	0.1	GO:1904585	response to putrescine(GO:1904585) cellular response to putrescine(GO:1904586) hepatocyte dedifferentiation(GO:1990828)
0.0	0.7	GO:0050884	neuromuscular process controlling posture(GO:0050884)
0.0	1.0	GO:1902259	regulation of delayed rectifier potassium channel activity(GO:1902259)
0.0	0.8	GO:0016254	preassembly of GPI anchor in ER membrane(GO:0016254)
0.0	0.5	GO:0006020	inositol metabolic process(GO:0006020)
0.0	0.1	GO:0061188	negative regulation of chromatin silencing at rDNA(GO:0061188)
0.0	0.1	GO:0001808	negative regulation of type IV hypersensitivity(GO:0001808)
0.0	0.1	GO:0046985	positive regulation of hemoglobin biosynthetic process(GO:0046985)
0.0	0.8	GO:0045746	negative regulation of Notch signaling pathway(GO:0045746)
0.0	1.0	GO:0000413	protein peptidyl-prolyl isomerization(GO:0000413)
0.0	0.6	GO:0030252	growth hormone secretion(GO:0030252)
0.0	0.5	GO:0003416	endochondral bone growth(GO:0003416)
0.0	0.3	GO:1903830	magnesium ion transmembrane transport(GO:1903830)
0.0	0.7	GO:0032784	regulation of DNA-templated transcription, elongation(GO:0032784)

Gene overrepresentation in cellular_component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.3	1.1	GO:1990423	RZZ complex(GO:1990423)
0.1	0.8	GO:0031501	mannosyltransferase complex(GO:0031501)
0.0	3.4	GO:0030669	clathrin-coated endocytic vesicle membrane(GO:0030669)
0.0	0.2	GO:0030896	checkpoint clamp complex(GO:0030896)
0.0	0.3	GO:0002199	zona pellucida receptor complex(GO:0002199)
0.0	1.8	GO:0005791	rough endoplasmic reticulum(GO:0005791)

Gene overrepresentation in molecular_function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.4	2.2	GO:0098625	methylselenol reductase activity(GO:0098625) methylseleninic acid reductase activity(GO:0098626)
0.4	1.7	GO:0003943	N-acetylgalactosamine-4-sulfatase activity(GO:0003943)
0.3	6.8	GO:0003680	AT DNA binding(GO:0003680)
0.3	0.8	GO:0004584	dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity(GO:0004584)
0.2	1.1	GO:0004936	alpha-adrenergic receptor activity(GO:0004936)
0.2	0.5	GO:0050333	thiamin-triphosphatase activity(GO:0050333)
0.1	1.7	GO:0008420	CTD phosphatase activity(GO:0008420)
0.1	3.3	GO:0042813	Wnt-activated receptor activity(GO:0042813)
0.1	0.5	GO:0033857	diphosphoinositol-pentakisphosphate kinase activity(GO:0033857)
0.1	1.7	GO:0004143	diacylglycerol kinase activity(GO:0004143)
0.1	0.6	GO:0046923	ER retention sequence binding(GO:0046923)
0.1	0.5	GO:0032810	sterol response element binding(GO:0032810)
0.0	1.0	GO:0005251	delayed rectifier potassium channel activity(GO:0005251)
0.0	0.2	GO:0008853	exodeoxyribonuclease III activity(GO:0008853)
0.0	1.0	GO:0005527	macrolide binding(GO:0005527) FK506 binding(GO:0005528)
0.0	0.6	GO:0005024	transforming growth factor beta-activated receptor activity(GO:0005024)
0.0	0.1	GO:0004514	nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.0	0.1	GO:0044020	histone methyltransferase activity (H4-R3 specific)(GO:0044020)
0.0	0.3	GO:0015095	magnesium ion transmembrane transporter activity(GO:0015095)
0.0	0.2	GO:0017147	Wnt-protein binding(GO:0017147)

Gene overrepresentation in C2:CP category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	3.3	PID WNT SIGNALING PATHWAY	Wnt signaling network
0.0	1.7	PID SMAD2 3PATHWAY	Regulation of cytoplasmic and nuclear SMAD2/3 signaling

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.7	REACTOME THE ACTIVATION OF ARYLSULFATASES	Genes involved in The activation of arylsulfatases
0.0	2.2	REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES	Genes involved in Synthesis and interconversion of nucleotide di- and triphosphates
0.0	1.7	REACTOME EFFECTS OF PIP2 HYDROLYSIS	Genes involved in Effects of PIP2 hydrolysis
0.0	1.1	REACTOME AMINE LIGAND BINDING RECEPTORS	Genes involved in Amine ligand-binding receptors
0.0	0.8	REACTOME SYNTHESIS OF GLYCOSYLPHOSPHATIDYLINOSITOL GPI	Genes involved in Synthesis of glycosylphosphatidylinositol (GPI)
0.0	3.3	REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS	Genes involved in Class B/2 (Secretin family receptors)
0.0	1.0	REACTOME VOLTAGE GATED POTASSIUM CHANNELS	Genes involved in Voltage gated Potassium channels
0.0	1.2	REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S	Genes involved in Activation of Chaperone Genes by XBP1(S)