avrg: SARS-CoV-2 Analysis Results (GEO series: GSE147507)

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
RBPJ Links Ensembl NCBI GeneCards UniProt	ENSG00000168214.16	recombination signal binding protein for immunoglobulin kappa J region

Gene	Promoter	Pearson corr. coef.	P-value	Plot
RBPJ	hg19_v2_chr4_+_26322987_26323031	0.55	1.1e-02	Click!

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Gene overrepresentation in biological_process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.6	GO:1903567	negative regulation of protein localization to cilium(GO:1903565) regulation of protein localization to ciliary membrane(GO:1903567) negative regulation of protein localization to ciliary membrane(GO:1903568)
0.1	0.4	GO:0043006	activation of phospholipase A2 activity by calcium-mediated signaling(GO:0043006)
0.1	0.3	GO:0061534	gamma-aminobutyric acid secretion, neurotransmission(GO:0061534)
0.1	0.2	GO:0042245	RNA repair(GO:0042245)
0.0	0.1	GO:0072361	regulation of glycolytic process by regulation of transcription from RNA polymerase II promoter(GO:0072361)
0.0	0.2	GO:0010157	response to chlorate(GO:0010157)
0.0	0.2	GO:0060301	vestibulocochlear nerve structural organization(GO:0021649) positive regulation of cytokine activity(GO:0060301) ganglion morphogenesis(GO:0061552) VEGF-activated neuropilin signaling pathway involved in axon guidance(GO:1902378) dorsal root ganglion morphogenesis(GO:1904835) otic placode development(GO:1905040)
0.0	0.2	GO:2000820	negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation(GO:2000820)
0.0	0.1	GO:0061511	centriole elongation(GO:0061511)
0.0	0.3	GO:0032876	negative regulation of DNA endoreduplication(GO:0032876)
0.0	0.1	GO:0071109	superior temporal gyrus development(GO:0071109)
0.0	0.1	GO:0036343	psychomotor behavior(GO:0036343)
0.0	0.1	GO:0006391	transcription initiation from mitochondrial promoter(GO:0006391)
0.0	0.1	GO:0006041	glucosamine metabolic process(GO:0006041)
0.0	0.2	GO:0072734	response to staurosporine(GO:0072733) cellular response to staurosporine(GO:0072734)
0.0	0.1	GO:0045602	negative regulation of endothelial cell differentiation(GO:0045602)
0.0	0.3	GO:0014877	response to muscle inactivity involved in regulation of muscle adaptation(GO:0014877) response to denervation involved in regulation of muscle adaptation(GO:0014894)
0.0	0.1	GO:0018277	protein deamination(GO:0018277)
0.0	0.4	GO:0000920	cell separation after cytokinesis(GO:0000920)
0.0	0.1	GO:0006398	mRNA 3'-end processing by stem-loop binding and cleavage(GO:0006398)
0.0	0.0	GO:2000393	negative regulation of lamellipodium morphogenesis(GO:2000393)
0.0	0.3	GO:0035745	T-helper 2 cell cytokine production(GO:0035745)
0.0	0.1	GO:0030242	pexophagy(GO:0030242)
0.0	0.0	GO:0032765	positive regulation of mast cell cytokine production(GO:0032765)
0.0	0.0	GO:0072302	negative regulation of metanephric glomerulus development(GO:0072299) negative regulation of metanephric glomerular mesangial cell proliferation(GO:0072302)
0.0	0.1	GO:1901189	positive regulation of ephrin receptor signaling pathway(GO:1901189) positive regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment(GO:1901297) positive regulation of canonical Wnt signaling pathway involved in heart development(GO:1905068)

Gene overrepresentation in cellular_component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.4	GO:0097489	multivesicular body, internal vesicle lumen(GO:0097489)
0.1	0.2	GO:0034515	proteasome storage granule(GO:0034515)
0.0	0.2	GO:0005879	axonemal microtubule(GO:0005879)
0.0	0.2	GO:0044294	dendritic growth cone(GO:0044294)
0.0	0.1	GO:0031417	NatC complex(GO:0031417)
0.0	0.2	GO:0097443	sorting endosome(GO:0097443)
0.0	0.1	GO:0008275	gamma-tubulin small complex(GO:0008275)
0.0	0.3	GO:0070938	contractile ring(GO:0070938)
0.0	0.1	GO:0030688	preribosome, small subunit precursor(GO:0030688)
0.0	0.2	GO:0008091	spectrin(GO:0008091)
0.0	0.3	GO:0031235	intrinsic component of the cytoplasmic side of the plasma membrane(GO:0031235)

Gene overrepresentation in molecular_function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.4	GO:0005006	epidermal growth factor-activated receptor activity(GO:0005006)
0.1	0.2	GO:0031862	prostanoid receptor binding(GO:0031862)
0.0	0.2	GO:0035514	DNA demethylase activity(GO:0035514)
0.0	0.1	GO:0035939	microsatellite binding(GO:0035939)
0.0	0.2	GO:0005119	smoothened binding(GO:0005119)
0.0	0.1	GO:0034511	U3 snoRNA binding(GO:0034511)
0.0	0.1	GO:0016300	tRNA (uracil) methyltransferase activity(GO:0016300)
0.0	0.2	GO:0008046	axon guidance receptor activity(GO:0008046)
0.0	0.2	GO:0042731	PH domain binding(GO:0042731)
0.0	0.1	GO:0070363	mitochondrial light strand promoter sense binding(GO:0070363)
0.0	0.3	GO:0008429	phosphatidylethanolamine binding(GO:0008429)
0.0	0.2	GO:0038085	vascular endothelial growth factor binding(GO:0038085)
0.0	0.2	GO:0004679	AMP-activated protein kinase activity(GO:0004679)
0.0	0.1	GO:0035500	MH2 domain binding(GO:0035500)
0.0	0.1	GO:0042289	MHC class II protein binding(GO:0042289)

Gene overrepresentation in C2:CP category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.4	PID SYNDECAN 3 PATHWAY	Syndecan-3-mediated signaling events

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.4	REACTOME SHC1 EVENTS IN EGFR SIGNALING	Genes involved in SHC1 events in EGFR signaling
0.0	0.4	REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS	Genes involved in Cell-extracellular matrix interactions