ISMARA results: SOX1

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avrg: SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for SOX1

Z-value: 0.57

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Transcription factors associated with SOX1

Gene Symbol	Gene ID	Gene Info
SOX1 Ensembl NCBI GeneCards UniProt	ENSG00000182968.3	SRY-box transcription factor 1

Activity profile of SOX1 motif

Sorted Z-values of SOX1 motif

No targets for SOX1

Network of associatons between targets according to the STRING database.

First level regulatory network of SOX1

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.5	GO:0000921	septin ring assembly(GO:0000921) septin ring organization(GO:0031106)
0.1	0.5	GO:0001808	negative regulation of type IV hypersensitivity(GO:0001808)
0.1	0.5	GO:0035407	histone H3-T11 phosphorylation(GO:0035407)
0.1	0.5	GO:0039019	pronephric nephron development(GO:0039019)
0.1	0.5	GO:0006642	triglyceride mobilization(GO:0006642)
0.0	0.5	GO:0090091	positive regulation of extracellular matrix disassembly(GO:0090091)
0.0	0.5	GO:0006054	N-acetylneuraminate metabolic process(GO:0006054)
0.0	0.5	GO:0051639	actin filament network formation(GO:0051639)
0.1	0.4	GO:0035063	nuclear speck organization(GO:0035063)
0.0	0.4	GO:0007023	post-chaperonin tubulin folding pathway(GO:0007023)

Showing 1 to 10 of 27 entries

Gene overrepresentation in cellular_component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.8	GO:0032433	filopodium tip(GO:0032433)
0.1	0.5	GO:0005826	actomyosin contractile ring(GO:0005826)
0.0	0.5	GO:0005828	kinetochore microtubule(GO:0005828)
0.0	0.4	GO:0031105	septin complex(GO:0031105)
0.0	0.3	GO:0043220	Schmidt-Lanterman incisure(GO:0043220)
0.0	0.2	GO:0033185	dolichol-phosphate-mannose synthase complex(GO:0033185)
0.0	0.2	GO:1990246	uniplex complex(GO:1990246)
0.0	0.1	GO:0035354	Toll-like receptor 1-Toll-like receptor 2 protein complex(GO:0035354)

Showing 1 to 8 of 8 entries

Gene overrepresentation in molecular_function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.8	GO:0060002	plus-end directed microfilament motor activity(GO:0060002)
0.0	0.6	GO:0070530	K63-linked polyubiquitin binding(GO:0070530)
0.1	0.5	GO:0042015	interleukin-20 binding(GO:0042015)
0.1	0.5	GO:0035402	histone kinase activity (H3-T11 specific)(GO:0035402)
0.1	0.5	GO:0008195	phosphatidate phosphatase activity(GO:0008195)
0.0	0.5	GO:0003836	beta-galactoside (CMP) alpha-2,3-sialyltransferase activity(GO:0003836)
0.0	0.5	GO:0002162	dystroglycan binding(GO:0002162)
0.1	0.4	GO:0061629	RNA polymerase II sequence-specific DNA binding transcription factor binding(GO:0061629)
0.0	0.4	GO:0035497	cAMP response element binding(GO:0035497)
0.0	0.3	GO:0039552	RIG-I binding(GO:0039552)

Showing 1 to 10 of 17 entries

Gene overrepresentation in C2:CP category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.6	PID P38 MKK3 6PATHWAY	p38 MAPK signaling pathway
0.0	0.5	SA G2 AND M PHASES	Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.

Showing 1 to 2 of 2 entries

Gene overrepresentation in C2:CP:REACTOME category:

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Total log-likelihood	Term	Description
0.6	REACTOME IRAK2 MEDIATED ACTIVATION OF TAK1 COMPLEX UPON TLR7 8 OR 9 STIMULATION	Genes involved in IRAK2 mediated activation of TAK1 complex upon TLR7/8 or 9 stimulation
0.5	REACTOME G2 M DNA DAMAGE CHECKPOINT	Genes involved in G2/M DNA damage checkpoint
0.5	REACTOME SYNTHESIS OF PE	Genes involved in Synthesis of PE
0.5	REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS	Genes involved in Termination of O-glycan biosynthesis
0.4	REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY	Genes involved in Post-chaperonin tubulin folding pathway
0.2	REACTOME SYNTHESIS OF SUBSTRATES IN N GLYCAN BIOSYTHESIS	Genes involved in Synthesis of substrates in N-glycan biosythesis

Showing 1 to 6 of 6 entries

Results for SOX1

Z-value: 0.57

Motif logo

Transcription factors associated with SOX1

Activity profile of SOX1 motif

Sorted Z-values of SOX1 motif

No targets for SOX1

Network of associatons between targets according to the STRING database.

First level regulatory network of SOX1

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Gene overrepresentation in cellular_component category:

Gene overrepresentation in molecular_function category:

Gene overrepresentation in C2:CP category:

Gene overrepresentation in C2:CP:REACTOME category: