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Epithelial-Mesenchymal Transition, human (Scheel, 2011)

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Results for AGGUAGU

Z-value: 0.38

Motif logo

miRNA associated with seed AGGUAGU

NamemiRBASE accession
MIMAT0000226
MIMAT0001080

Activity profile of AGGUAGU motif

Sorted Z-values of AGGUAGU motif

Promoter Log-likelihood Transcript Gene Gene Info
chr2_+_188974364 0.66 ENST00000304636.9
ENST00000317840.9
collagen type III alpha 1 chain
chr7_+_94394886 0.52 ENST00000297268.11
ENST00000620463.1
collagen type I alpha 2 chain
chr17_-_50201618 0.34 ENST00000225964.10
collagen type I alpha 1 chain
chr17_+_48997377 0.26 ENST00000290341.8
insulin like growth factor 2 mRNA binding protein 1
chr1_-_91886144 0.24 ENST00000212355.9
transforming growth factor beta receptor 3
chr5_+_172641241 0.22 ENST00000369800.6
ENST00000520919.5
ENST00000522853.5
neuralized E3 ubiquitin protein ligase 1B
chr17_+_70169516 0.19 ENST00000243457.4
potassium inwardly rectifying channel subfamily J member 2
chr7_-_23470469 0.18 ENST00000258729.8
insulin like growth factor 2 mRNA binding protein 3
chr5_-_159099909 0.13 ENST00000313708.11
EBF transcription factor 1
chr18_+_6834473 0.13 ENST00000581099.5
ENST00000419673.6
ENST00000531294.5
Rho GTPase activating protein 28
chr2_+_148644706 0.12 ENST00000258484.11
enhancer of polycomb homolog 2
chr6_+_34236865 0.11 ENST00000674029.1
ENST00000447654.5
ENST00000347617.10
ENST00000401473.7
ENST00000311487.9
high mobility group AT-hook 1
chr7_-_27156646 0.10 ENST00000242159.5
homeobox A7
chr10_+_135067 0.09 ENST00000381591.5
zinc finger MYND-type containing 11
chr5_+_154445979 0.09 ENST00000297109.11
SAP30 like
chr17_+_57256514 0.09 ENST00000284073.7
ENST00000674964.1
musashi RNA binding protein 2
chr9_-_76906090 0.09 ENST00000376718.8
prune homolog 2 with BCH domain
chr14_-_87993159 0.09 ENST00000393568.8
ENST00000261304.7
galactosylceramidase
chr16_+_397183 0.09 ENST00000620944.4
ENST00000621774.4
ENST00000219479.7
NME/NM23 nucleoside diphosphate kinase 4
chrX_-_84502442 0.09 ENST00000297977.9
ENST00000506585.6
ENST00000373177.3
ENST00000449553.2
highly divergent homeobox
chr9_+_96450115 0.09 ENST00000375249.5
ENST00000375251.7
hyaluronan binding protein 4
chr19_+_46601296 0.09 ENST00000598871.5
ENST00000291295.14
ENST00000594523.5
calmodulin 3
chr1_+_164559766 0.08 ENST00000367897.5
ENST00000559240.5
PBX homeobox 1
chr5_-_131796921 0.08 ENST00000307968.11
ENST00000307954.12
folliculin interacting protein 1
chr10_+_1049476 0.08 ENST00000358220.5
WD repeat domain 37
chr12_+_65824475 0.07 ENST00000403681.7
high mobility group AT-hook 2
chr7_-_27143672 0.07 ENST00000222726.4
homeobox A5
chr12_+_54008961 0.07 ENST00000040584.6
homeobox C8
chr17_+_29390326 0.07 ENST00000261716.8
TAO kinase 1
chr15_+_38252792 0.07 ENST00000299084.9
sprouty related EVH1 domain containing 1
chr1_-_114716729 0.07 ENST00000369535.5
NRAS proto-oncogene, GTPase
chrX_+_135032346 0.07 ENST00000257013.9
retrotransposon Gag like 8C
chr3_-_21751189 0.06 ENST00000281523.8
zinc finger protein 385D
chr14_+_90397019 0.06 ENST00000447653.8
ENST00000356978.9
ENST00000626705.2
calmodulin 1
chr22_+_50343294 0.06 ENST00000359139.7
ENST00000395741.7
ENST00000612753.5
ENST00000395744.7
protein phosphatase 6 regulatory subunit 2
chr3_+_61561561 0.06 ENST00000474889.6
protein tyrosine phosphatase receptor type G
chr9_+_6413191 0.06 ENST00000276893.10
ubiquitin like with PHD and ring finger domains 2
chr8_+_80485641 0.06 ENST00000430430.5
zinc finger and BTB domain containing 10
chr18_-_21111778 0.05 ENST00000399799.3
Rho associated coiled-coil containing protein kinase 1
chr11_-_796185 0.05 ENST00000533385.5
ENST00000528936.5
ENST00000629634.2
ENST00000625752.2
ENST00000528606.5
ENST00000320230.9
solute carrier family 25 member 22
chr1_+_193121950 0.05 ENST00000367435.5
cell division cycle 73
chr15_+_45587366 0.05 ENST00000220531.9
biogenesis of lysosomal organelles complex 1 subunit 6
chr10_+_70478761 0.05 ENST00000263563.7
phosphatase domain containing paladin 1
chr3_-_47781837 0.04 ENST00000254480.10
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
chr12_-_24949026 0.04 ENST00000539780.5
ENST00000546285.1
ENST00000342945.9
ENST00000261192.12
branched chain amino acid transaminase 1
chr2_+_203328378 0.04 ENST00000430418.5
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
ENST00000417864.5
ENST00000422511.6
abl interactor 2
chr12_+_12611839 0.04 ENST00000228865.3
cAMP responsive element binding protein like 2
chr12_+_64610458 0.04 ENST00000542104.6
Ras association domain family member 3
chr4_+_55346213 0.04 ENST00000679836.1
ENST00000264228.9
ENST00000679707.1
steroid 5 alpha-reductase 3
novel protein, SRD5A3-RP11-177J6.1 readthrough
chr11_+_112074287 0.04 ENST00000532163.5
ENST00000280352.13
ENST00000393047.8
ENST00000526879.5
ENST00000525785.5
NKAP domain containing 1
chr17_+_8310220 0.04 ENST00000583529.1
ENST00000361926.8
Rho guanine nucleotide exchange factor 15
chr16_-_88941198 0.04 ENST00000327483.9
ENST00000564416.1
CBFA2/RUNX1 partner transcriptional co-repressor 3
chr4_-_18021727 0.04 ENST00000675605.1
ENST00000675927.1
ENST00000674942.1
ENST00000675143.1
ENST00000382226.5
ENST00000326877.8
ENST00000635767.1
ligand dependent nuclear receptor corepressor like
chrX_+_96684801 0.04 ENST00000324765.13
diaphanous related formin 2
chr16_+_70299156 0.04 ENST00000393657.6
ENST00000288071.11
ENST00000355992.7
ENST00000567706.1
ENST00000443119.7
DEAD-box helicase 19B
novel protein, DDX19B and DDX19A readthrough
chr10_+_96043394 0.03 ENST00000403870.7
ENST00000265992.9
ENST00000465148.3
cyclin J
chrX_-_135052114 0.03 ENST00000370775.3
retrotransposon Gag like 8A
chr1_+_108560031 0.03 ENST00000405454.1
ENST00000370035.8
family with sequence similarity 102 member B
chr19_-_47471886 0.03 ENST00000236877.11
ENST00000597014.1
solute carrier family 8 member A2
chr7_+_94656325 0.03 ENST00000482108.1
ENST00000488574.5
ENST00000612748.1
ENST00000613043.1
paternally expressed 10
chr1_+_153259684 0.03 ENST00000368742.4
loricrin cornified envelope precursor protein
chr14_-_57268810 0.03 ENST00000413566.6
ENST00000340918.11
ENST00000621441.5
exocyst complex component 5
chr2_-_127858107 0.03 ENST00000409955.1
ENST00000272645.9
RNA polymerase II subunit D
chr20_+_3888772 0.03 ENST00000497424.5
pantothenate kinase 2
chr7_+_35800932 0.03 ENST00000635172.1
ENST00000399034.7
ENST00000350320.10
ENST00000435235.6
ENST00000672279.1
ENST00000634600.1
ENST00000635047.1
septin 7
chr1_+_179954740 0.03 ENST00000491495.2
ENST00000367607.8
centrosomal protein 350
chr17_-_73232218 0.03 ENST00000583024.1
ENST00000403627.7
ENST00000405159.7
ENST00000581110.1
family with sequence similarity 104 member A
chr7_+_88759690 0.03 ENST00000333190.5
zinc finger protein 804B
chrX_+_118974608 0.03 ENST00000304778.11
ENST00000371628.8
LON peptidase N-terminal domain and ring finger 3
chr6_+_107028188 0.03 ENST00000311381.8
ENST00000405204.6
mitochondrial transcription rescue factor 1
chrX_-_41922992 0.03 ENST00000646120.2
ENST00000421587.8
ENST00000644770.1
ENST00000645566.1
ENST00000378166.9
ENST00000378158.6
ENST00000644219.1
ENST00000442742.7
ENST00000644347.1
calcium/calmodulin dependent serine protein kinase
chr15_-_65422894 0.03 ENST00000352385.3
immunoglobulin superfamily DCC subclass member 4
chr12_-_68933161 0.02 ENST00000549781.1
ENST00000551568.6
ENST00000548262.5
carboxypeptidase M
chr7_-_120858066 0.02 ENST00000222747.8
tetraspanin 12
chr20_-_5610980 0.02 ENST00000379019.7
glycerophosphocholine phosphodiesterase 1
chr12_-_109880527 0.02 ENST00000318348.9
glycolipid transfer protein
chr12_+_67648737 0.02 ENST00000344096.4
ENST00000393555.3
dual specificity tyrosine phosphorylation regulated kinase 2
chr8_-_23457618 0.02 ENST00000358689.9
ENST00000518718.1
ectonucleoside triphosphate diphosphohydrolase 4
chr11_+_63813384 0.02 ENST00000294244.9
spindlin interactor and repressor of chromatin binding
chr7_-_75738930 0.02 ENST00000336926.11
ENST00000434438.6
huntingtin interacting protein 1
chr3_+_196568611 0.02 ENST00000440469.1
ENST00000311630.7
F-box protein 45
chr4_+_112145445 0.02 ENST00000309733.6
family with sequence similarity 241 member A
chr16_+_69187125 0.02 ENST00000336278.8
syntrophin beta 2
chr20_-_675793 0.02 ENST00000488788.2
ENST00000246104.7
novel protein
scratch family transcriptional repressor 2
chr8_+_55102012 0.02 ENST00000327381.7
XK related 4
chr17_+_30378903 0.02 ENST00000225719.9
carboxypeptidase D
chr9_-_122931477 0.02 ENST00000373656.4
zinc finger and BTB domain containing 26
chr17_-_10026265 0.02 ENST00000437099.6
ENST00000396115.6
growth arrest specific 7
chr12_-_111685922 0.02 ENST00000419234.9
BRCA1 associated protein
chr3_+_133574434 0.02 ENST00000508481.5
ENST00000420115.6
ENST00000504867.5
ENST00000507408.5
ENST00000511392.5
ENST00000515421.1
CDV3 homolog
chr13_-_102401599 0.02 ENST00000376131.8
fibroblast growth factor 14
chr9_+_130172343 0.02 ENST00000372398.6
neuronal calcium sensor 1
chr8_-_109975757 0.02 ENST00000524391.6
potassium voltage-gated channel modifier subfamily V member 1
chr2_+_178480446 0.02 ENST00000234453.10
pleckstrin homology domain containing A3
chr14_+_55027200 0.02 ENST00000395472.2
ENST00000555846.2
suppressor of cytokine signaling 4
chr8_+_22245125 0.02 ENST00000306433.9
ENST00000519237.5
ENST00000397802.8
RNA polymerase III subunit D
chr8_+_58553216 0.02 ENST00000447182.6
ENST00000413219.6
ENST00000424270.6
ENST00000523483.5
ENST00000520168.5
ENST00000260130.9
syndecan binding protein
chr3_+_50674896 0.02 ENST00000266037.10
dedicator of cytokinesis 3
chr12_-_75209422 0.02 ENST00000393288.2
ENST00000540018.5
potassium voltage-gated channel subfamily C member 2
chr4_+_17614630 0.02 ENST00000237380.12
mediator complex subunit 28
chr5_+_149345430 0.02 ENST00000513661.5
ENST00000329271.8
ENST00000416916.2
GrpE like 2, mitochondrial
chr17_+_2796404 0.02 ENST00000366401.8
ENST00000254695.13
ENST00000542807.1
RAP1 GTPase activating protein 2
chr9_+_106863121 0.02 ENST00000472574.1
ENST00000277225.10
zinc finger protein 462
chr2_+_169733811 0.02 ENST00000392647.7
kelch like family member 23
chr20_-_34112205 0.02 ENST00000374980.3
eukaryotic translation initiation factor 2 subunit beta
chr19_-_48363914 0.02 ENST00000377431.6
ENST00000293261.8
transmembrane protein 143
chr9_-_14693419 0.02 ENST00000380916.9
zinc finger DHHC-type palmitoyltransferase 21
chr21_-_38498415 0.02 ENST00000398905.5
ENST00000398907.5
ENST00000453032.6
ENST00000288319.12
ETS transcription factor ERG
chr14_+_58200106 0.02 ENST00000254286.9
actin related protein 10
chr9_+_130835246 0.01 ENST00000318560.6
ABL proto-oncogene 1, non-receptor tyrosine kinase
chr15_-_50119215 0.01 ENST00000284509.11
ENST00000674213.1
ATPase phospholipid transporting 8B4 (putative)
chr2_+_112482133 0.01 ENST00000233336.7
tubulin tyrosine ligase
chr21_+_29298890 0.01 ENST00000286800.8
BTB domain and CNC homolog 1
chr19_+_13952466 0.01 ENST00000254337.10
DDB1 and CUL4 associated factor 15
chr22_-_17121311 0.01 ENST00000331437.4
ENST00000399875.1
transmembrane protein 121B
chr20_+_325536 0.01 ENST00000342665.5
SRY-box transcription factor 12
chr9_-_69672341 0.01 ENST00000265381.7
amyloid beta precursor protein binding family A member 1
chr16_+_70346856 0.01 ENST00000302243.12
ENST00000417604.6
DEAD-box helicase 19A
chr1_-_207051202 0.01 ENST00000315927.9
YOD1 deubiquitinase
chr8_+_120125093 0.01 ENST00000297848.8
ENST00000309791.8
collagen type XIV alpha 1 chain
chr12_+_110502200 0.01 ENST00000409246.5
ENST00000392672.8
ENST00000409425.5
RAD9 checkpoint clamp component B
chr3_+_14947568 0.01 ENST00000413118.5
ENST00000425241.5
nuclear receptor subfamily 2 group C member 2
chr12_+_123384078 0.01 ENST00000402868.8
lysine methyltransferase 5A
chr10_-_37857582 0.01 ENST00000395867.8
ENST00000611278.4
zinc finger protein 248
chr12_-_57846686 0.01 ENST00000548823.1
ENST00000398073.7
CTD small phosphatase 2
chr21_-_44801813 0.01 ENST00000345496.7
ubiquitin conjugating enzyme E2 G2
chr9_+_107283256 0.01 ENST00000358015.8
RAD23 homolog B, nucleotide excision repair protein
chr1_+_113073162 0.01 ENST00000361127.6
leucine rich repeats and immunoglobulin like domains 2
chr15_+_51751587 0.01 ENST00000539962.6
ENST00000249700.9
tropomodulin 2
chr11_-_78188588 0.01 ENST00000526208.5
ENST00000529350.1
ENST00000530018.5
ENST00000528776.1
ENST00000340067.4
potassium channel tetramerization domain containing 21
chr4_+_105552611 0.01 ENST00000265154.6
ENST00000420470.3
Rho guanine nucleotide exchange factor 38
chr22_+_29883158 0.01 ENST00000333027.7
ENST00000401950.7
ENST00000445401.5
ENST00000323630.9
ENST00000351488.7
myotubularin related protein 3
chr10_+_100912955 0.01 ENST00000370271.7
ENST00000238961.9
ENST00000370269.3
ENST00000609386.1
SMC5-SMC6 complex localization factor 2
chr1_-_205631962 0.01 ENST00000289703.8
ENST00000357992.9
ETS transcription factor ELK4
chr12_+_12717359 0.01 ENST00000614874.2
ENST00000228872.9
cyclin dependent kinase inhibitor 1B
chr1_-_20786610 0.01 ENST00000375000.5
ENST00000312239.10
ENST00000419490.5
ENST00000414993.1
ENST00000443615.1
heterochromatin protein 1 binding protein 3
chrX_-_24027186 0.01 ENST00000328046.8
kelch like family member 15
chr5_-_39074377 0.01 ENST00000514735.1
ENST00000357387.8
ENST00000296782.9
RPTOR independent companion of MTOR complex 2
chrX_+_135985416 0.01 ENST00000370698.7
ENST00000627534.2
ENST00000370695.8
ENST00000630721.3
ENST00000678163.1
solute carrier family 9 member A6
chr12_-_42484298 0.01 ENST00000640055.1
ENST00000639566.1
ENST00000455697.6
ENST00000639589.1
prickle planar cell polarity protein 1
chr12_-_77065526 0.01 ENST00000547316.1
ENST00000416496.6
ENST00000550669.5
ENST00000322886.12
E2F transcription factor 7
chr17_-_63773534 0.00 ENST00000403162.7
ENST00000582252.1
ENST00000225726.10
coiled-coil domain containing 47
chr5_+_138338256 0.00 ENST00000513056.5
ENST00000239906.10
ENST00000511276.1
family with sequence similarity 53 member C
chr3_-_150546403 0.00 ENST00000239944.7
ENST00000491660.1
ENST00000487153.1
stress associated endoplasmic reticulum protein 1
chr12_-_389249 0.00 ENST00000535014.5
ENST00000543507.1
ENST00000544760.1
ENST00000399788.7
lysine demethylase 5A
chr3_-_28348805 0.00 ENST00000457172.5
ENST00000479665.6
5-azacytidine induced 2
chr18_-_26865689 0.00 ENST00000675739.1
ENST00000383168.9
ENST00000672981.2
ENST00000578776.1
aquaporin 4
chrX_+_2828808 0.00 ENST00000381163.7
glycogenin 2
chr12_-_57006476 0.00 ENST00000300101.3
zinc finger and BTB domain containing 39
chr9_-_109167159 0.00 ENST00000561981.5
ferric chelate reductase 1 like
chr1_-_17439657 0.00 ENST00000375436.9
regulator of chromosome condensation 2
chr2_-_50347710 0.00 ENST00000342183.9
ENST00000401710.5
neurexin 1
chr12_+_50400809 0.00 ENST00000293618.12
ENST00000429001.7
ENST00000398473.7
ENST00000548174.5
ENST00000548697.5
ENST00000548993.5
ENST00000614335.4
ENST00000522085.5
ENST00000615080.4
ENST00000518444.5
ENST00000551886.5
ENST00000523389.5
ENST00000518561.5
ENST00000347328.9
ENST00000550260.1
La ribonucleoprotein 4
chr5_-_154478218 0.00 ENST00000231121.3
heart and neural crest derivatives expressed 1
chr4_+_70721953 0.00 ENST00000381006.8
ENST00000226328.8
RUN and FYVE domain containing 3
chrX_-_133415478 0.00 ENST00000370828.4
glypican 4
chr9_-_132944600 0.00 ENST00000490179.3
ENST00000643583.1
ENST00000298552.9
ENST00000643072.1
ENST00000642745.1
ENST00000647462.1
ENST00000643875.1
ENST00000642627.1
ENST00000475903.6
ENST00000642617.1
ENST00000642646.1
ENST00000646625.1
ENST00000645150.1
ENST00000645129.1
ENST00000403810.6
ENST00000643691.1
ENST00000644097.1
TSC complex subunit 1
chr2_+_60756226 0.00 ENST00000238714.8
poly(A) polymerase gamma
chr7_+_18495723 0.00 ENST00000681950.1
ENST00000622668.4
ENST00000405010.7
ENST00000406451.8
ENST00000441542.7
ENST00000428307.6
ENST00000681273.1
histone deacetylase 9
chr22_-_21867610 0.00 ENST00000215832.11
ENST00000398822.7
mitogen-activated protein kinase 1
chr14_-_81220951 0.00 ENST00000553612.6
general transcription factor IIA subunit 1
chr6_-_7313146 0.00 ENST00000489567.5
ENST00000479365.5
ENST00000462112.1
ENST00000397511.6
ENST00000244763.9
ENST00000474597.5
ENST00000650389.1
signal sequence receptor subunit 1
chr16_-_30610342 0.00 ENST00000287461.8
zinc finger protein 689

Network of associatons between targets according to the STRING database.

First level regulatory network of AGGUAGU

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0044691 tooth eruption(GO:0044691)
0.1 0.7 GO:0060414 aorta smooth muscle tissue morphogenesis(GO:0060414)
0.1 0.2 GO:0090076 relaxation of skeletal muscle(GO:0090076)
0.1 0.2 GO:0034699 transforming growth factor beta receptor complex assembly(GO:0007181) response to luteinizing hormone(GO:0034699)
0.0 0.2 GO:0090402 oncogene-induced cell senescence(GO:0090402)
0.0 0.5 GO:0043589 skin morphogenesis(GO:0043589)
0.0 0.2 GO:0070086 ubiquitin-dependent endocytosis(GO:0070086)
0.0 0.1 GO:0006683 galactosylceramide catabolic process(GO:0006683)
0.0 0.1 GO:0034402 recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex(GO:0034402)
0.0 0.1 GO:0060435 bronchiole development(GO:0060435)
0.0 0.1 GO:0060979 vasculogenesis involved in coronary vascular morphogenesis(GO:0060979)
0.0 0.1 GO:0002904 positive regulation of B cell apoptotic process(GO:0002904)
0.0 0.2 GO:0070934 CRD-mediated mRNA stabilization(GO:0070934)
0.0 0.1 GO:1903347 negative regulation of bicellular tight junction assembly(GO:1903347)
0.0 0.1 GO:0045617 negative regulation of keratinocyte differentiation(GO:0045617)
0.0 0.1 GO:1903385 regulation of homophilic cell adhesion(GO:1903385)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.5 GO:0005583 fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643)
0.0 0.2 GO:0034673 inhibin-betaglycan-ActRII complex(GO:0034673)
0.0 0.2 GO:0035985 senescence-associated heterochromatin focus(GO:0035985)
0.0 0.1 GO:0032777 Piccolo NuA4 histone acetyltransferase complex(GO:0032777)
0.0 0.2 GO:0070937 CRD-mediated mRNA stability complex(GO:0070937)
0.0 0.1 GO:0070545 PeBoW complex(GO:0070545)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.5 GO:0048407 platelet-derived growth factor binding(GO:0048407)
0.0 0.1 GO:0004336 galactosylceramidase activity(GO:0004336)
0.0 0.1 GO:0044378 non-sequence-specific DNA binding, bending(GO:0044378)
0.0 0.2 GO:0005114 type II transforming growth factor beta receptor binding(GO:0005114)
0.0 0.1 GO:0035501 MH1 domain binding(GO:0035501)
0.0 0.1 GO:0005173 stem cell factor receptor binding(GO:0005173)
0.0 0.1 GO:0042030 ATPase inhibitor activity(GO:0042030)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.5 NABA COLLAGENS Genes encoding collagen proteins

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.9 REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN Genes involved in Platelet Adhesion to exposed collagen
0.0 0.1 REACTOME APOBEC3G MEDIATED RESISTANCE TO HIV1 INFECTION Genes involved in APOBEC3G mediated resistance to HIV-1 infection