Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
BARHL1 | hg38_v1_chr9_+_132582581_132582617 | -0.70 | 5.3e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_91179472 Show fit | 6.03 |
ENST00000550099.5
ENST00000546391.5 |
decorin |
|
chr12_-_91179355 Show fit | 4.14 |
ENST00000550563.5
ENST00000546370.5 |
decorin |
|
chr2_-_224947030 Show fit | 3.97 |
ENST00000409592.7
|
dedicator of cytokinesis 10 |
|
chr12_-_91182784 Show fit | 3.33 |
ENST00000547568.6
ENST00000052754.10 ENST00000552962.5 |
decorin |
|
chr12_-_91182652 Show fit | 2.90 |
ENST00000552145.5
ENST00000546745.5 |
decorin |
|
chr9_+_96928310 Show fit | 2.58 |
ENST00000354649.7
|
NUT family member 2G |
|
chr3_+_157436842 Show fit | 2.31 |
ENST00000295927.4
|
pentraxin 3 |
|
chr12_-_91180365 Show fit | 2.23 |
ENST00000547937.5
|
decorin |
|
chr13_+_101489940 Show fit | 2.16 |
ENST00000376162.7
|
integrin subunit beta like 1 |
|
chr5_-_111976925 Show fit | 2.14 |
ENST00000395634.7
|
neuronal regeneration related protein |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.5 | 24.8 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.4 | 6.0 | GO:0002315 | marginal zone B cell differentiation(GO:0002315) |
0.7 | 4.3 | GO:0070171 | negative regulation of tooth mineralization(GO:0070171) |
0.3 | 4.0 | GO:0048251 | elastic fiber assembly(GO:0048251) |
0.0 | 4.0 | GO:0030574 | collagen catabolic process(GO:0030574) |
0.1 | 3.8 | GO:0071447 | cellular response to hydroperoxide(GO:0071447) |
0.0 | 3.7 | GO:0006081 | cellular aldehyde metabolic process(GO:0006081) |
0.7 | 2.2 | GO:1903015 | regulation of exo-alpha-sialidase activity(GO:1903015) |
0.1 | 2.2 | GO:1900119 | positive regulation of execution phase of apoptosis(GO:1900119) |
0.0 | 2.2 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.1 | 27.1 | GO:0005589 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 6.6 | GO:0043197 | dendritic spine(GO:0043197) |
0.1 | 4.8 | GO:1904724 | tertiary granule lumen(GO:1904724) |
0.4 | 4.0 | GO:0071953 | elastic fiber(GO:0071953) |
0.0 | 2.5 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.0 | 2.3 | GO:0043209 | myelin sheath(GO:0043209) |
0.0 | 2.0 | GO:0005796 | Golgi lumen(GO:0005796) |
0.0 | 2.0 | GO:0000922 | spindle pole(GO:0000922) |
0.1 | 1.9 | GO:0005942 | phosphatidylinositol 3-kinase complex(GO:0005942) |
0.6 | 1.8 | GO:0005588 | collagen type V trimer(GO:0005588) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 22.6 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.0 | 6.6 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.8 | 5.1 | GO:0018479 | benzaldehyde dehydrogenase (NAD+) activity(GO:0018479) |
0.0 | 5.0 | GO:0004860 | protein kinase inhibitor activity(GO:0004860) |
0.0 | 4.5 | GO:0005178 | integrin binding(GO:0005178) |
0.1 | 4.3 | GO:0017075 | syntaxin-1 binding(GO:0017075) |
0.0 | 2.9 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.0 | 2.4 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.2 | 2.2 | GO:0001849 | complement component C1q binding(GO:0001849) |
0.0 | 2.2 | GO:0015485 | cholesterol binding(GO:0015485) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 28.6 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.1 | 6.0 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.1 | 5.3 | PID NETRIN PATHWAY | Netrin-mediated signaling events |
0.0 | 5.0 | NABA CORE MATRISOME | Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans |
0.1 | 4.6 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 1.9 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.0 | 1.8 | ST MYOCYTE AD PATHWAY | Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway. |
0.0 | 1.7 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 1.6 | PID KIT PATHWAY | Signaling events mediated by Stem cell factor receptor (c-Kit) |
0.0 | 1.5 | PID SHP2 PATHWAY | SHP2 signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 24.4 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 6.5 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.0 | 6.0 | REACTOME GENERIC TRANSCRIPTION PATHWAY | Genes involved in Generic Transcription Pathway |
0.1 | 4.6 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.2 | 4.1 | REACTOME ROLE OF DCC IN REGULATING APOPTOSIS | Genes involved in Role of DCC in regulating apoptosis |
0.0 | 2.6 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.0 | 2.3 | REACTOME PPARA ACTIVATES GENE EXPRESSION | Genes involved in PPARA Activates Gene Expression |
0.1 | 1.9 | REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES | Genes involved in Cytosolic sulfonation of small molecules |
0.1 | 1.9 | REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE | Genes involved in Synthesis of PIPs at the Golgi membrane |
0.1 | 1.9 | REACTOME METABOLISM OF PORPHYRINS | Genes involved in Metabolism of porphyrins |