Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_91153149 Show fit | 1.70 |
ENST00000550758.1
|
decorin |
|
chr12_-_91179355 Show fit | 1.62 |
ENST00000550563.5
ENST00000546370.5 |
decorin |
|
chr2_-_187554351 Show fit | 1.50 |
ENST00000437725.5
ENST00000409676.5 ENST00000233156.9 ENST00000339091.8 ENST00000420747.1 |
tissue factor pathway inhibitor |
|
chr12_-_91182784 Show fit | 1.43 |
ENST00000547568.6
ENST00000052754.10 ENST00000552962.5 |
decorin |
|
chr2_-_237414157 Show fit | 1.42 |
ENST00000295550.9
ENST00000353578.9 ENST00000392004.7 ENST00000433762.1 ENST00000392003.6 |
collagen type VI alpha 3 chain |
|
chr14_-_59630806 Show fit | 1.19 |
ENST00000342503.8
|
reticulon 1 |
|
chr12_-_91182652 Show fit | 1.18 |
ENST00000552145.5
ENST00000546745.5 |
decorin |
|
chr12_-_91179472 Show fit | 1.17 |
ENST00000550099.5
ENST00000546391.5 |
decorin |
|
chr14_-_59630582 Show fit | 1.12 |
ENST00000395090.5
|
reticulon 1 |
|
chr2_-_237414127 Show fit | 1.11 |
ENST00000472056.5
|
collagen type VI alpha 3 chain |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 7.1 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.0 | 2.4 | GO:0030574 | collagen catabolic process(GO:0030574) |
0.2 | 1.5 | GO:0007598 | blood coagulation, extrinsic pathway(GO:0007598) |
0.0 | 1.0 | GO:0050832 | defense response to fungus(GO:0050832) |
0.2 | 0.8 | GO:1990523 | bone regeneration(GO:1990523) |
0.0 | 0.8 | GO:2000766 | negative regulation of cytoplasmic translation(GO:2000766) |
0.0 | 0.8 | GO:0048935 | peripheral nervous system neuron differentiation(GO:0048934) peripheral nervous system neuron development(GO:0048935) |
0.1 | 0.7 | GO:0035583 | sequestering of TGFbeta in extracellular matrix(GO:0035583) |
0.1 | 0.6 | GO:0071492 | cellular response to UV-A(GO:0071492) |
0.0 | 0.6 | GO:0090162 | establishment of epithelial cell polarity(GO:0090162) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 9.6 | GO:0005589 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 2.2 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
0.0 | 0.9 | GO:0001527 | microfibril(GO:0001527) fibril(GO:0043205) |
0.0 | 0.8 | GO:0031045 | dense core granule(GO:0031045) |
0.0 | 0.8 | GO:1990124 | messenger ribonucleoprotein complex(GO:1990124) |
0.0 | 0.5 | GO:0005883 | neurofilament(GO:0005883) |
0.0 | 0.4 | GO:0097136 | Bcl-2 family protein complex(GO:0097136) |
0.0 | 0.4 | GO:0042622 | photoreceptor outer segment membrane(GO:0042622) |
0.1 | 0.3 | GO:1990578 | perinuclear endoplasmic reticulum membrane(GO:1990578) |
0.1 | 0.3 | GO:0032144 | 4-aminobutyrate transaminase complex(GO:0032144) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.9 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.0 | 2.9 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.0 | 0.7 | GO:0000900 | translation repressor activity, nucleic acid binding(GO:0000900) |
0.1 | 0.6 | GO:0035374 | chondroitin sulfate binding(GO:0035374) |
0.1 | 0.5 | GO:0019770 | IgG receptor activity(GO:0019770) |
0.0 | 0.5 | GO:0005031 | tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035) |
0.1 | 0.4 | GO:0050436 | microfibril binding(GO:0050436) |
0.1 | 0.4 | GO:0004758 | serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454) |
0.0 | 0.4 | GO:0030160 | GKAP/Homer scaffold activity(GO:0030160) |
0.0 | 0.4 | GO:0008597 | calcium-dependent protein serine/threonine phosphatase regulator activity(GO:0008597) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.4 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 2.6 | NABA COLLAGENS | Genes encoding collagen proteins |
0.1 | 1.5 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.0 | 0.7 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 0.6 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 0.4 | SA PROGRAMMED CELL DEATH | Programmed cell death, or apoptosis, eliminates damaged or unneeded cells. |
0.0 | 0.1 | PID AR NONGENOMIC PATHWAY | Nongenotropic Androgen signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 7.1 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 2.6 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 1.3 | REACTOME FORMATION OF FIBRIN CLOT CLOTTING CASCADE | Genes involved in Formation of Fibrin Clot (Clotting Cascade) |
0.0 | 0.7 | REACTOME CRMPS IN SEMA3A SIGNALING | Genes involved in CRMPs in Sema3A signaling |
0.0 | 0.7 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 0.6 | REACTOME INFLAMMASOMES | Genes involved in Inflammasomes |
0.0 | 0.6 | REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION | Genes involved in GABA synthesis, release, reuptake and degradation |
0.0 | 0.4 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.0 | 0.4 | REACTOME DIGESTION OF DIETARY CARBOHYDRATE | Genes involved in Digestion of dietary carbohydrate |
0.0 | 0.4 | REACTOME ALPHA LINOLENIC ACID ALA METABOLISM | Genes involved in alpha-linolenic acid (ALA) metabolism |