Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSG00000180828.3 | basic helix-loop-helix family member e22 | |
ENSG00000180535.4 | basic helix-loop-helix family member a15 | |
ENSG00000125533.6 | basic helix-loop-helix family member e23 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
BHLHA15 | hg38_v1_chr7_+_98211431_98211474 | -0.91 | 1.5e-03 | Click! |
BHLHE22 | hg38_v1_chr8_+_64580357_64580374 | -0.53 | 1.8e-01 | Click! |
BHLHE23 | hg38_v1_chr20_-_63006961_63007035 | 0.16 | 7.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_-_111976925 Show fit | 3.62 |
ENST00000395634.7
|
neuronal regeneration related protein |
|
chr2_-_187513641 Show fit | 2.38 |
ENST00000392365.5
ENST00000435414.5 |
tissue factor pathway inhibitor |
|
chr10_-_77090722 Show fit | 1.90 |
ENST00000638531.1
|
potassium calcium-activated channel subfamily M alpha 1 |
|
chr9_+_18474100 Show fit | 1.53 |
ENST00000327883.11
ENST00000431052.6 ENST00000380570.8 ENST00000380548.9 |
ADAMTS like 1 |
|
chr1_+_170664121 Show fit | 1.19 |
ENST00000239461.11
|
paired related homeobox 1 |
|
chr12_-_91179472 Show fit | 1.08 |
ENST00000550099.5
ENST00000546391.5 |
decorin |
|
chr12_-_91179355 Show fit | 1.04 |
ENST00000550563.5
ENST00000546370.5 |
decorin |
|
chr3_-_114758940 Show fit | 0.98 |
ENST00000464560.5
|
zinc finger and BTB domain containing 20 |
|
chr3_-_114759115 Show fit | 0.93 |
ENST00000471418.5
|
zinc finger and BTB domain containing 20 |
|
chr1_+_170663917 Show fit | 0.92 |
ENST00000497230.2
|
paired related homeobox 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 2.4 | GO:0007598 | blood coagulation, extrinsic pathway(GO:0007598) |
0.1 | 2.3 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.2 | 2.1 | GO:0048664 | neuron fate determination(GO:0048664) |
0.1 | 1.9 | GO:0034465 | response to carbon monoxide(GO:0034465) |
0.0 | 1.9 | GO:0032728 | positive regulation of interferon-beta production(GO:0032728) |
0.1 | 1.7 | GO:0036066 | protein O-linked fucosylation(GO:0036066) |
0.3 | 0.8 | GO:1900377 | negative regulation of melanin biosynthetic process(GO:0048022) negative regulation of secondary metabolite biosynthetic process(GO:1900377) |
0.2 | 0.7 | GO:0097325 | melanocyte proliferation(GO:0097325) |
0.1 | 0.7 | GO:1902748 | positive regulation of lens fiber cell differentiation(GO:1902748) |
0.2 | 0.6 | GO:0031453 | regulation of heterochromatin assembly(GO:0031445) positive regulation of heterochromatin assembly(GO:0031453) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.6 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.2 | 2.3 | GO:0098647 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 1.9 | GO:0005901 | caveola(GO:0005901) |
0.1 | 0.8 | GO:0097442 | CA3 pyramidal cell dendrite(GO:0097442) |
0.0 | 0.7 | GO:0071438 | invadopodium membrane(GO:0071438) |
0.0 | 0.6 | GO:0044615 | nuclear pore nuclear basket(GO:0044615) |
0.0 | 0.4 | GO:0043083 | synaptic cleft(GO:0043083) |
0.1 | 0.3 | GO:0097636 | intrinsic component of autophagosome membrane(GO:0097636) integral component of autophagosome membrane(GO:0097637) |
0.0 | 0.3 | GO:0000786 | nucleosome(GO:0000786) |
0.0 | 0.1 | GO:0072557 | IPAF inflammasome complex(GO:0072557) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.4 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.0 | 2.3 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.1 | 2.1 | GO:0071837 | HMG box domain binding(GO:0071837) |
0.2 | 1.9 | GO:0060072 | large conductance calcium-activated potassium channel activity(GO:0060072) |
0.0 | 1.6 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.0 | 0.8 | GO:0031697 | beta-1 adrenergic receptor binding(GO:0031697) |
0.0 | 0.7 | GO:0008239 | dipeptidyl-peptidase activity(GO:0008239) |
0.0 | 0.7 | GO:0001205 | transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001205) |
0.0 | 0.6 | GO:0043495 | protein anchor(GO:0043495) |
0.0 | 0.6 | GO:0002162 | dystroglycan binding(GO:0002162) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.4 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.0 | 2.3 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 0.5 | PID PDGFRA PATHWAY | PDGFR-alpha signaling pathway |
0.0 | 0.2 | PID ALK2 PATHWAY | ALK2 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.4 | REACTOME FORMATION OF FIBRIN CLOT CLOTTING CASCADE | Genes involved in Formation of Fibrin Clot (Clotting Cascade) |
0.1 | 2.3 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 0.6 | REACTOME REGULATION OF GLUCOKINASE BY GLUCOKINASE REGULATORY PROTEIN | Genes involved in Regulation of Glucokinase by Glucokinase Regulatory Protein |
0.0 | 0.6 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |
0.0 | 0.4 | REACTOME G2 M DNA DAMAGE CHECKPOINT | Genes involved in G2/M DNA damage checkpoint |
0.0 | 0.3 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
0.0 | 0.2 | REACTOME DIGESTION OF DIETARY CARBOHYDRATE | Genes involved in Digestion of dietary carbohydrate |
0.0 | 0.2 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol |
0.0 | 0.1 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |