Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
BHLHE40 | hg38_v1_chr3_+_4979428_4979495 | -0.48 | 2.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr6_-_136550819 Show fit | 1.60 |
ENST00000616617.4
ENST00000618822.4 |
microtubule associated protein 7 |
|
chr8_+_32548303 Show fit | 1.39 |
ENST00000650967.1
|
neuregulin 1 |
|
chr1_+_34782259 Show fit | 1.39 |
ENST00000373362.3
|
gap junction protein beta 3 |
|
chr6_-_136550407 Show fit | 1.38 |
ENST00000354570.8
|
microtubule associated protein 7 |
|
chr7_+_148133684 Show fit | 1.34 |
ENST00000628930.2
|
contactin associated protein 2 |
|
chr8_+_32548210 Show fit | 1.23 |
ENST00000523079.5
ENST00000650919.1 |
neuregulin 1 |
|
chr10_-_5977589 Show fit | 1.00 |
ENST00000620345.4
ENST00000397251.7 ENST00000397248.6 ENST00000622442.4 ENST00000620865.4 |
interleukin 15 receptor subunit alpha |
|
chr10_-_5977535 Show fit | 0.93 |
ENST00000379977.8
|
interleukin 15 receptor subunit alpha |
|
chr19_-_55140922 Show fit | 0.88 |
ENST00000589745.5
|
troponin T1, slow skeletal type |
|
chr17_-_17206264 Show fit | 0.84 |
ENST00000321560.4
|
phospholipase D family member 6 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 3.4 | GO:0038129 | ERBB3 signaling pathway(GO:0038129) |
0.0 | 2.9 | GO:0006970 | response to osmotic stress(GO:0006970) |
0.0 | 1.4 | GO:0071300 | cellular response to retinoic acid(GO:0071300) |
0.3 | 1.3 | GO:0071109 | superior temporal gyrus development(GO:0071109) |
0.3 | 1.1 | GO:0060057 | regulation of vitamin D 24-hydroxylase activity(GO:0010979) positive regulation of vitamin D 24-hydroxylase activity(GO:0010980) apoptotic process involved in mammary gland involution(GO:0060057) positive regulation of apoptotic process involved in mammary gland involution(GO:0060058) positive regulation of apoptotic process involved in morphogenesis(GO:1902339) regulation of mammary gland involution(GO:1903519) positive regulation of mammary gland involution(GO:1903521) positive regulation of apoptotic process involved in development(GO:1904747) |
0.0 | 1.1 | GO:0006359 | regulation of transcription from RNA polymerase III promoter(GO:0006359) |
0.1 | 1.0 | GO:2001288 | positive regulation of caveolin-mediated endocytosis(GO:2001288) |
0.1 | 0.9 | GO:0031444 | slow-twitch skeletal muscle fiber contraction(GO:0031444) |
0.3 | 0.8 | GO:0007308 | oocyte construction(GO:0007308) oocyte axis specification(GO:0007309) oocyte anterior/posterior axis specification(GO:0007314) pole plasm assembly(GO:0007315) maternal determination of anterior/posterior axis, embryo(GO:0008358) P granule organization(GO:0030719) |
0.2 | 0.6 | GO:0070407 | oxidation-dependent protein catabolic process(GO:0070407) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.6 | GO:0030673 | axolemma(GO:0030673) |
0.0 | 3.2 | GO:0005875 | microtubule associated complex(GO:0005875) |
0.1 | 1.4 | GO:0005922 | connexon complex(GO:0005922) |
0.0 | 1.1 | GO:0005666 | DNA-directed RNA polymerase III complex(GO:0005666) |
0.0 | 1.0 | GO:0005771 | multivesicular body(GO:0005771) |
0.0 | 0.9 | GO:0005861 | troponin complex(GO:0005861) |
0.0 | 0.7 | GO:0042645 | nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645) |
0.1 | 0.4 | GO:0005713 | recombination nodule(GO:0005713) |
0.0 | 0.4 | GO:0030687 | preribosome, large subunit precursor(GO:0030687) |
0.0 | 0.3 | GO:0034448 | EGO complex(GO:0034448) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.2 | GO:0005176 | ErbB-2 class receptor binding(GO:0005176) |
0.0 | 2.4 | GO:0004896 | cytokine receptor activity(GO:0004896) |
0.1 | 1.4 | GO:0005243 | gap junction channel activity(GO:0005243) |
0.4 | 1.1 | GO:1902271 | D3 vitamins binding(GO:1902271) |
0.0 | 1.1 | GO:0003899 | DNA-directed RNA polymerase activity(GO:0003899) |
0.0 | 1.0 | GO:0019871 | sodium channel inhibitor activity(GO:0019871) |
0.1 | 0.9 | GO:0031014 | troponin T binding(GO:0031014) |
0.2 | 0.6 | GO:0070361 | mitochondrial light strand promoter anti-sense binding(GO:0070361) mitochondrial heavy strand promoter anti-sense binding(GO:0070362) mitochondrial heavy strand promoter sense binding(GO:0070364) |
0.0 | 0.6 | GO:0016881 | acid-amino acid ligase activity(GO:0016881) |
0.1 | 0.4 | GO:0052654 | branched-chain-amino-acid transaminase activity(GO:0004084) L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.2 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 1.6 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 1.1 | PID RETINOIC ACID PATHWAY | Retinoic acid receptors-mediated signaling |
0.0 | 0.5 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.0 | 0.0 | SA G1 AND S PHASES | Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.2 | REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING | Genes involved in Downregulation of ERBB2:ERBB3 signaling |
0.1 | 1.4 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.0 | 1.1 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.0 | 0.9 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 0.8 | REACTOME MITOCHONDRIAL TRNA AMINOACYLATION | Genes involved in Mitochondrial tRNA aminoacylation |
0.0 | 0.4 | REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM | Genes involved in Branched-chain amino acid catabolism |
0.0 | 0.4 | REACTOME MEIOTIC RECOMBINATION | Genes involved in Meiotic Recombination |
0.0 | 0.3 | REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS | Genes involved in Purine ribonucleoside monophosphate biosynthesis |
0.0 | 0.3 | REACTOME HDL MEDIATED LIPID TRANSPORT | Genes involved in HDL-mediated lipid transport |
0.0 | 0.2 | REACTOME METABOLISM OF POLYAMINES | Genes involved in Metabolism of polyamines |