Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
CPEB1 | hg38_v1_chr15_-_82647336_82647386, hg38_v1_chr15_-_82571803_82571827 | 0.31 | 4.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_91146195 Show fit | 2.40 |
ENST00000548218.1
|
decorin |
|
chr2_-_189179754 Show fit | 1.92 |
ENST00000374866.9
ENST00000618828.1 |
collagen type V alpha 2 chain |
|
chr1_+_163069353 Show fit | 1.63 |
ENST00000531057.5
ENST00000527809.5 ENST00000367908.8 ENST00000367909.11 |
regulator of G protein signaling 4 |
|
chr8_+_76681208 Show fit | 1.61 |
ENST00000651372.2
|
zinc finger homeobox 4 |
|
chr9_-_92424427 Show fit | 1.60 |
ENST00000375550.5
|
osteomodulin |
|
chr8_-_119638780 Show fit | 1.56 |
ENST00000522826.5
ENST00000520066.5 ENST00000259486.10 ENST00000075322.11 |
ectonucleotide pyrophosphatase/phosphodiesterase 2 |
|
chr9_-_20622479 Show fit | 1.46 |
ENST00000380338.9
|
MLLT3 super elongation complex subunit |
|
chr14_-_91946989 Show fit | 1.42 |
ENST00000556154.5
|
fibulin 5 |
|
chr17_-_55722857 Show fit | 1.42 |
ENST00000424486.3
|
transmembrane protein 100 |
|
chr2_+_209580024 Show fit | 1.40 |
ENST00000392194.5
|
microtubule associated protein 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 4.7 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.5 | 4.3 | GO:1902748 | positive regulation of lens fiber cell differentiation(GO:1902748) |
0.0 | 3.4 | GO:0010811 | positive regulation of cell-substrate adhesion(GO:0010811) |
0.2 | 2.6 | GO:0048251 | elastic fiber assembly(GO:0048251) |
0.3 | 2.1 | GO:0060399 | positive regulation of growth hormone receptor signaling pathway(GO:0060399) |
0.6 | 1.9 | GO:1903225 | negative regulation of endodermal cell differentiation(GO:1903225) |
0.0 | 1.8 | GO:0000188 | inactivation of MAPK activity(GO:0000188) |
0.2 | 1.6 | GO:0001554 | luteolysis(GO:0001554) |
0.1 | 1.6 | GO:0034638 | phosphatidylcholine catabolic process(GO:0034638) |
0.2 | 1.5 | GO:2000230 | negative regulation of pancreatic stellate cell proliferation(GO:2000230) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 4.7 | GO:0098647 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.3 | 2.6 | GO:0071953 | elastic fiber(GO:0071953) |
0.1 | 2.5 | GO:0010369 | chromocenter(GO:0010369) |
0.1 | 2.2 | GO:0005614 | interstitial matrix(GO:0005614) |
0.6 | 1.9 | GO:0005588 | collagen type V trimer(GO:0005588) |
0.2 | 1.9 | GO:0098645 | network-forming collagen trimer(GO:0098642) collagen network(GO:0098645) |
0.0 | 1.6 | GO:0005796 | Golgi lumen(GO:0005796) |
0.0 | 1.5 | GO:0031430 | M band(GO:0031430) |
0.2 | 1.4 | GO:0097442 | CA3 pyramidal cell dendrite(GO:0097442) |
0.0 | 1.4 | GO:0008023 | transcription elongation factor complex(GO:0008023) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.4 | GO:0001205 | transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001205) |
0.1 | 4.6 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.0 | 3.7 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.0 | 2.7 | GO:0005178 | integrin binding(GO:0005178) |
0.1 | 2.2 | GO:0001968 | fibronectin binding(GO:0001968) |
0.0 | 2.0 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.4 | 1.6 | GO:0047391 | alkylglycerophosphoethanolamine phosphodiesterase activity(GO:0047391) |
0.1 | 1.6 | GO:0001965 | G-protein alpha-subunit binding(GO:0001965) |
0.2 | 1.4 | GO:0008597 | calcium-dependent protein serine/threonine phosphatase regulator activity(GO:0008597) |
0.1 | 1.4 | GO:0050692 | DBD domain binding(GO:0050692) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.8 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 4.2 | NABA CORE MATRISOME | Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans |
0.1 | 3.3 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 1.7 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.0 | 1.7 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 1.5 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 1.4 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
0.0 | 1.4 | PID LKB1 PATHWAY | LKB1 signaling events |
0.0 | 1.3 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.0 | 1.2 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.7 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 3.3 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 1.9 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.0 | 1.8 | REACTOME G ALPHA Z SIGNALLING EVENTS | Genes involved in G alpha (z) signalling events |
0.1 | 1.5 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.0 | 1.3 | REACTOME TIE2 SIGNALING | Genes involved in Tie2 Signaling |
0.0 | 1.3 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.0 | 1.1 | REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES | Genes involved in Cytosolic sulfonation of small molecules |
0.0 | 1.0 | REACTOME SIGNALING BY ACTIVATED POINT MUTANTS OF FGFR1 | Genes involved in Signaling by activated point mutants of FGFR1 |
0.0 | 1.0 | REACTOME MEIOTIC SYNAPSIS | Genes involved in Meiotic Synapsis |