Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
CUX1 | hg38_v1_chr7_+_101815904_101815963 | 0.29 | 4.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_153615858 Show fit | 3.17 |
ENST00000476873.5
|
S100 calcium binding protein A14 |
|
chr1_-_153616289 Show fit | 2.78 |
ENST00000368701.5
ENST00000344616.4 |
S100 calcium binding protein A14 |
|
chr12_-_57767057 Show fit | 2.77 |
ENST00000228606.9
|
cytochrome P450 family 27 subfamily B member 1 |
|
chr15_+_40239857 Show fit | 2.53 |
ENST00000260404.8
|
p21 (RAC1) activated kinase 6 |
|
chr1_+_153031195 Show fit | 2.35 |
ENST00000307098.5
|
small proline rich protein 1B |
|
chr19_+_35118456 Show fit | 2.26 |
ENST00000604621.5
|
FXYD domain containing ion transport regulator 3 |
|
chr10_-_114684612 Show fit | 2.24 |
ENST00000533213.6
ENST00000369252.8 |
actin binding LIM protein 1 |
|
chr19_-_55147319 Show fit | 2.13 |
ENST00000593046.5
|
troponin T1, slow skeletal type |
|
chr15_+_43593054 Show fit | 2.13 |
ENST00000453782.5
ENST00000300283.10 ENST00000437924.5 |
creatine kinase, mitochondrial 1B |
|
chr3_-_190122317 Show fit | 2.08 |
ENST00000427335.6
|
prolyl 3-hydroxylase 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 6.6 | GO:0031444 | slow-twitch skeletal muscle fiber contraction(GO:0031444) |
0.2 | 6.0 | GO:0090026 | positive regulation of monocyte chemotaxis(GO:0090026) |
0.3 | 4.4 | GO:0031642 | negative regulation of myelination(GO:0031642) |
0.0 | 3.4 | GO:0030032 | lamellipodium assembly(GO:0030032) |
0.0 | 3.0 | GO:0003009 | skeletal muscle contraction(GO:0003009) |
0.9 | 2.8 | GO:1901421 | positive regulation of response to alcohol(GO:1901421) |
0.0 | 2.8 | GO:0070268 | cornification(GO:0070268) |
0.3 | 2.4 | GO:0051121 | hepoxilin metabolic process(GO:0051121) hepoxilin biosynthetic process(GO:0051122) |
0.0 | 2.2 | GO:2000649 | regulation of sodium ion transmembrane transporter activity(GO:2000649) |
0.1 | 2.1 | GO:0019511 | peptidyl-proline hydroxylation(GO:0019511) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 9.9 | GO:0005861 | troponin complex(GO:0005861) |
0.0 | 4.6 | GO:0001650 | fibrillar center(GO:0001650) |
0.0 | 3.7 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.1 | 3.4 | GO:0001533 | cornified envelope(GO:0001533) |
0.0 | 2.8 | GO:0005741 | mitochondrial outer membrane(GO:0005741) |
0.0 | 2.6 | GO:0070821 | tertiary granule membrane(GO:0070821) |
0.0 | 2.3 | GO:0016529 | sarcoplasmic reticulum(GO:0016529) |
0.3 | 1.9 | GO:0005610 | laminin-5 complex(GO:0005610) |
0.0 | 1.9 | GO:0035580 | specific granule lumen(GO:0035580) |
0.2 | 1.8 | GO:0042105 | alpha-beta T cell receptor complex(GO:0042105) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 9.9 | GO:0031014 | troponin T binding(GO:0031014) |
0.0 | 9.7 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.1 | 5.7 | GO:0042379 | chemokine receptor binding(GO:0042379) |
0.1 | 5.0 | GO:0048365 | Rac GTPase binding(GO:0048365) |
0.1 | 3.3 | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709) |
0.0 | 3.0 | GO:0017080 | sodium channel regulator activity(GO:0017080) |
0.1 | 2.7 | GO:0042834 | peptidoglycan binding(GO:0042834) |
0.2 | 2.5 | GO:0019534 | toxin transporter activity(GO:0019534) |
0.8 | 2.4 | GO:0016165 | linoleate 13S-lipoxygenase activity(GO:0016165) |
0.0 | 2.1 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.2 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.0 | 3.4 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.1 | 2.7 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
0.0 | 2.1 | PID ALPHA SYNUCLEIN PATHWAY | Alpha-synuclein signaling |
0.0 | 2.1 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.1 | 1.9 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 1.7 | PID EPHA2 FWD PATHWAY | EPHA2 forward signaling |
0.0 | 1.6 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.0 | 1.5 | PID ERBB1 RECEPTOR PROXIMAL PATHWAY | EGF receptor (ErbB1) signaling pathway |
0.0 | 1.5 | PID RAC1 PATHWAY | RAC1 signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.9 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.2 | 4.4 | REACTOME ACTIVATION OF RAC | Genes involved in Activation of Rac |
0.0 | 3.9 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.1 | 3.3 | REACTOME DCC MEDIATED ATTRACTIVE SIGNALING | Genes involved in DCC mediated attractive signaling |
0.1 | 2.8 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |
0.2 | 2.7 | REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY | Genes involved in Adenylate cyclase activating pathway |
0.1 | 2.5 | REACTOME STEROID HORMONES | Genes involved in Steroid hormones |
0.0 | 1.9 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.1 | 1.8 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |
0.0 | 1.8 | REACTOME CELL JUNCTION ORGANIZATION | Genes involved in Cell junction organization |