Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HOXD8 | hg38_v1_chr2_+_176129680_176129764 | -0.79 | 1.9e-02 | Click! |
DLX4 | hg38_v1_chr17_+_49969178_49969214 | -0.72 | 4.2e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_91179355 Show fit | 3.05 |
ENST00000550563.5
ENST00000546370.5 |
decorin |
|
chr12_-_91179472 Show fit | 2.44 |
ENST00000550099.5
ENST00000546391.5 |
decorin |
|
chr13_+_101489940 Show fit | 2.05 |
ENST00000376162.7
|
integrin subunit beta like 1 |
|
chr1_-_72100930 Show fit | 1.65 |
ENST00000306821.3
|
neuronal growth regulator 1 |
|
chr12_-_91153149 Show fit | 1.48 |
ENST00000550758.1
|
decorin |
|
chr5_-_20575850 Show fit | 1.38 |
ENST00000507958.5
|
cadherin 18 |
|
chr2_-_224947030 Show fit | 1.23 |
ENST00000409592.7
|
dedicator of cytokinesis 10 |
|
chr8_-_13276491 Show fit | 1.20 |
ENST00000512044.6
|
DLC1 Rho GTPase activating protein |
|
chr10_-_77638369 Show fit | 0.97 |
ENST00000372443.6
|
potassium calcium-activated channel subfamily M alpha 1 |
|
chr9_+_87497222 Show fit | 0.93 |
ENST00000358077.9
|
death associated protein kinase 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 8.2 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.3 | 3.9 | GO:0034465 | response to carbon monoxide(GO:0034465) |
0.1 | 2.0 | GO:0071447 | cellular response to hydroperoxide(GO:0071447) |
0.0 | 1.5 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
0.0 | 1.5 | GO:0006501 | C-terminal protein lipidation(GO:0006501) |
0.1 | 1.4 | GO:1900119 | positive regulation of execution phase of apoptosis(GO:1900119) |
0.1 | 1.4 | GO:0002315 | marginal zone B cell differentiation(GO:0002315) |
0.0 | 1.2 | GO:1900026 | positive regulation of substrate adhesion-dependent cell spreading(GO:1900026) |
0.0 | 1.1 | GO:0039694 | viral RNA genome replication(GO:0039694) RNA replication(GO:0039703) |
0.0 | 1.0 | GO:0016486 | peptide hormone processing(GO:0016486) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 8.2 | GO:0098647 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 5.3 | GO:0005901 | caveola(GO:0005901) |
0.0 | 1.7 | GO:1904724 | tertiary granule lumen(GO:1904724) |
0.3 | 1.6 | GO:0034680 | integrin alpha10-beta1 complex(GO:0034680) |
0.0 | 1.5 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.0 | 1.5 | GO:0005796 | Golgi lumen(GO:0005796) |
0.0 | 1.1 | GO:0005942 | phosphatidylinositol 3-kinase complex(GO:0005942) |
0.0 | 0.9 | GO:0005614 | interstitial matrix(GO:0005614) |
0.0 | 0.6 | GO:0044665 | MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339) |
0.1 | 0.5 | GO:0034673 | inhibin-betaglycan-ActRII complex(GO:0034673) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.7 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.4 | 3.9 | GO:0060072 | large conductance calcium-activated potassium channel activity(GO:0060072) |
0.1 | 2.0 | GO:0017075 | syntaxin-1 binding(GO:0017075) |
0.2 | 1.6 | GO:0098639 | collagen binding involved in cell-matrix adhesion(GO:0098639) |
0.0 | 1.6 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.1 | 1.0 | GO:0035005 | 1-phosphatidylinositol-4-phosphate 3-kinase activity(GO:0035005) |
0.0 | 1.0 | GO:0001965 | G-protein alpha-subunit binding(GO:0001965) |
0.0 | 0.9 | GO:0042169 | SH2 domain binding(GO:0042169) |
0.1 | 0.7 | GO:0001849 | complement component C1q binding(GO:0001849) |
0.2 | 0.6 | GO:0005477 | pyruvate secondary active transmembrane transporter activity(GO:0005477) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.4 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 2.2 | PID NETRIN PATHWAY | Netrin-mediated signaling events |
0.0 | 1.7 | PID INTEGRIN CS PATHWAY | Integrin family cell surface interactions |
0.0 | 1.4 | PID SHP2 PATHWAY | SHP2 signaling |
0.0 | 1.4 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.0 | 1.3 | PID KIT PATHWAY | Signaling events mediated by Stem cell factor receptor (c-Kit) |
0.0 | 1.2 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.0 | 1.1 | PID AURORA B PATHWAY | Aurora B signaling |
0.0 | 1.1 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.0 | 0.9 | ST DIFFERENTIATION PATHWAY IN PC12 CELLS | Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 8.2 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.1 | 2.2 | REACTOME ROLE OF DCC IN REGULATING APOPTOSIS | Genes involved in Role of DCC in regulating apoptosis |
0.0 | 1.4 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.1 | 1.1 | REACTOME GLYCOPROTEIN HORMONES | Genes involved in Glycoprotein hormones |
0.0 | 1.0 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.0 | 0.9 | REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE | Genes involved in Synthesis of PIPs at the Golgi membrane |
0.0 | 0.8 | REACTOME G ALPHA Z SIGNALLING EVENTS | Genes involved in G alpha (z) signalling events |
0.1 | 0.7 | REACTOME DIGESTION OF DIETARY CARBOHYDRATE | Genes involved in Digestion of dietary carbohydrate |
0.0 | 0.7 | REACTOME SIGNALING BY ACTIVATED POINT MUTANTS OF FGFR1 | Genes involved in Signaling by activated point mutants of FGFR1 |
0.0 | 0.7 | REACTOME HS GAG DEGRADATION | Genes involved in HS-GAG degradation |