Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
E2F4 | hg38_v1_chr16_+_67192116_67192225 | 0.80 | 1.6e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr9_-_23821275 Show fit | 1.12 |
ENST00000380110.8
|
ELAV like RNA binding protein 2 |
|
chr16_+_68645290 Show fit | 0.77 |
ENST00000264012.9
|
cadherin 3 |
|
chr19_+_39196956 Show fit | 0.75 |
ENST00000339852.5
|
NCCRP1, F-box associated domain containing |
|
chr9_-_23821809 Show fit | 0.71 |
ENST00000544538.5
|
ELAV like RNA binding protein 2 |
|
chr16_+_788614 Show fit | 0.65 |
ENST00000262315.14
ENST00000455171.6 ENST00000317063.10 |
chromosome transmission fidelity factor 18 |
|
chr2_+_172427662 Show fit | 0.57 |
ENST00000264107.12
ENST00000458358.5 |
integrin subunit alpha 6 |
|
chr5_-_60844185 Show fit | 0.55 |
ENST00000505959.5
|
ELOVL fatty acid elongase 7 |
|
chr11_+_62856004 Show fit | 0.54 |
ENST00000680729.1
|
solute carrier family 3 member 2 |
|
chr13_+_32315468 Show fit | 0.52 |
ENST00000530893.6
ENST00000380152.8 |
BRCA2 DNA repair associated |
|
chr12_-_84912783 Show fit | 0.52 |
ENST00000680892.1
ENST00000266682.10 ENST00000680714.1 ENST00000552192.5 |
solute carrier family 6 member 15 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.4 | GO:0060356 | leucine import(GO:0060356) |
0.3 | 1.3 | GO:1990426 | homologous recombination-dependent replication fork processing(GO:1990426) |
0.0 | 1.3 | GO:0051290 | protein heterotetramerization(GO:0051290) |
0.2 | 1.2 | GO:1900264 | regulation of DNA-directed DNA polymerase activity(GO:1900262) positive regulation of DNA-directed DNA polymerase activity(GO:1900264) |
0.1 | 1.1 | GO:0010668 | ectodermal cell differentiation(GO:0010668) |
0.2 | 1.0 | GO:1902990 | DNA replication, removal of RNA primer(GO:0043137) mitochondrial DNA repair(GO:0043504) mitotic telomere maintenance via semi-conservative replication(GO:1902990) |
0.1 | 1.0 | GO:0006268 | DNA unwinding involved in DNA replication(GO:0006268) |
0.3 | 0.9 | GO:0070512 | regulation of histone H4-K20 methylation(GO:0070510) positive regulation of histone H4-K20 methylation(GO:0070512) |
0.2 | 0.9 | GO:0097021 | Peyer's patch morphogenesis(GO:0061146) lymphocyte migration into lymphoid organs(GO:0097021) |
0.1 | 0.9 | GO:2000628 | regulation of miRNA metabolic process(GO:2000628) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.6 | GO:0042555 | MCM complex(GO:0042555) |
0.1 | 1.2 | GO:0031390 | Ctf18 RFC-like complex(GO:0031390) |
0.0 | 1.1 | GO:0030056 | hemidesmosome(GO:0030056) |
0.3 | 1.0 | GO:0005760 | gamma DNA polymerase complex(GO:0005760) |
0.2 | 0.9 | GO:0031436 | BRCA1-BARD1 complex(GO:0031436) |
0.3 | 0.8 | GO:0033593 | BRCA2-MAGE-D1 complex(GO:0033593) |
0.1 | 0.7 | GO:0072687 | meiotic spindle(GO:0072687) |
0.0 | 0.7 | GO:0030057 | desmosome(GO:0030057) |
0.1 | 0.6 | GO:0005971 | ribonucleoside-diphosphate reductase complex(GO:0005971) |
0.0 | 0.6 | GO:0000800 | lateral element(GO:0000800) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.8 | GO:0005432 | calcium:sodium antiporter activity(GO:0005432) |
0.0 | 1.3 | GO:0003730 | mRNA 3'-UTR binding(GO:0003730) |
0.1 | 1.2 | GO:0033170 | DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170) |
0.0 | 1.2 | GO:0003684 | damaged DNA binding(GO:0003684) |
0.1 | 1.1 | GO:0038132 | neuregulin binding(GO:0038132) |
0.2 | 1.0 | GO:0016890 | site-specific endodeoxyribonuclease activity, specific for altered base(GO:0016890) |
0.0 | 1.0 | GO:0004812 | aminoacyl-tRNA ligase activity(GO:0004812) ligase activity, forming carbon-oxygen bonds(GO:0016875) ligase activity, forming aminoacyl-tRNA and related compounds(GO:0016876) |
0.0 | 1.0 | GO:0004003 | ATP-dependent DNA helicase activity(GO:0004003) |
0.0 | 0.9 | GO:0035925 | mRNA 3'-UTR AU-rich region binding(GO:0035925) |
0.1 | 0.8 | GO:0010484 | H3 histone acetyltransferase activity(GO:0010484) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.7 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.1 | 2.3 | PID ATR PATHWAY | ATR signaling pathway |
0.0 | 1.4 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 1.2 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.1 | 1.1 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 1.0 | PID IL2 PI3K PATHWAY | IL2 signaling events mediated by PI3K |
0.0 | 0.6 | PID INSULIN GLUCOSE PATHWAY | Insulin-mediated glucose transport |
0.0 | 0.4 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 0.2 | ST JAK STAT PATHWAY | Jak-STAT Pathway |
0.0 | 0.2 | PID MYC PATHWAY | C-MYC pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.5 | REACTOME FANCONI ANEMIA PATHWAY | Genes involved in Fanconi Anemia pathway |
0.0 | 2.0 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.1 | 1.7 | REACTOME MEIOTIC RECOMBINATION | Genes involved in Meiotic Recombination |
0.1 | 1.5 | REACTOME UNWINDING OF DNA | Genes involved in Unwinding of DNA |
0.1 | 1.0 | REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND | Genes involved in Removal of the Flap Intermediate from the C-strand |
0.0 | 0.9 | REACTOME DESTABILIZATION OF MRNA BY KSRP | Genes involved in Destabilization of mRNA by KSRP |
0.0 | 0.8 | REACTOME MITOCHONDRIAL TRNA AMINOACYLATION | Genes involved in Mitochondrial tRNA aminoacylation |
0.0 | 0.7 | REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS | Genes involved in Synthesis of very long-chain fatty acyl-CoAs |
0.0 | 0.7 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 0.6 | REACTOME ASSOCIATION OF LICENSING FACTORS WITH THE PRE REPLICATIVE COMPLEX | Genes involved in Association of licensing factors with the pre-replicative complex |