Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
EGR3 | hg38_v1_chr8_-_22693469_22693487 | 0.75 | 3.2e-02 | Click! |
EGR2 | hg38_v1_chr10_-_62816341_62816388, hg38_v1_chr10_-_62816309_62816320 | 0.14 | 7.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_-_36244438 Show fit | 1.49 |
ENST00000303965.9
|
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 |
|
chr6_-_106974721 Show fit | 1.24 |
ENST00000606017.2
ENST00000620405.1 |
CD24 molecule |
|
chr8_-_126558461 Show fit | 1.16 |
ENST00000304916.4
|
LRAT domain containing 2 |
|
chr4_-_25862979 Show fit | 1.04 |
ENST00000399878.8
|
SEL1L family member 3 |
|
chr12_-_27970047 Show fit | 1.01 |
ENST00000395868.7
|
parathyroid hormone like hormone |
|
chr18_+_36297661 Show fit | 0.98 |
ENST00000257209.8
ENST00000590592.5 ENST00000359247.8 |
formin homology 2 domain containing 3 |
|
chr12_-_27970273 Show fit | 0.90 |
ENST00000542963.1
ENST00000535992.5 |
parathyroid hormone like hormone |
|
chr18_-_31042808 Show fit | 0.89 |
ENST00000434452.5
|
desmocollin 3 |
|
chr7_+_69598465 Show fit | 0.89 |
ENST00000342771.10
|
activator of transcription and developmental regulator AUTS2 |
|
chr18_-_31042733 Show fit | 0.84 |
ENST00000360428.9
|
desmocollin 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 4.1 | GO:0021842 | directional guidance of interneurons involved in migration from the subpallium to the cortex(GO:0021840) chemorepulsion involved in interneuron migration from the subpallium to the cortex(GO:0021842) ERBB3 signaling pathway(GO:0038129) |
0.2 | 2.1 | GO:0098582 | innate vocalization behavior(GO:0098582) positive regulation of histone H4-K16 acetylation(GO:2000620) |
0.1 | 2.0 | GO:0002076 | osteoblast development(GO:0002076) |
0.0 | 1.8 | GO:0070268 | cornification(GO:0070268) |
0.0 | 1.5 | GO:0008088 | axo-dendritic transport(GO:0008088) |
0.1 | 1.4 | GO:0051639 | actin filament network formation(GO:0051639) |
0.1 | 1.3 | GO:0007256 | activation of JNKK activity(GO:0007256) |
0.3 | 1.2 | GO:0032600 | B cell receptor transport within lipid bilayer(GO:0032595) B cell receptor transport into membrane raft(GO:0032597) protein transport out of membrane raft(GO:0032599) chemokine receptor transport out of membrane raft(GO:0032600) negative regulation of transforming growth factor beta3 production(GO:0032913) chemokine receptor transport within lipid bilayer(GO:0033606) |
0.4 | 1.1 | GO:0060128 | corticotropin hormone secreting cell differentiation(GO:0060128) mesendoderm migration(GO:0090133) cell migration involved in mesendoderm migration(GO:0090134) |
0.2 | 1.1 | GO:1903282 | negative regulation of dopamine uptake involved in synaptic transmission(GO:0051585) norepinephrine uptake(GO:0051620) regulation of norepinephrine uptake(GO:0051621) negative regulation of norepinephrine uptake(GO:0051622) negative regulation of catecholamine uptake involved in synaptic transmission(GO:0051945) regulation of glutathione peroxidase activity(GO:1903282) positive regulation of glutathione peroxidase activity(GO:1903284) positive regulation of hydrogen peroxide catabolic process(GO:1903285) positive regulation of peroxidase activity(GO:2000470) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.8 | GO:0030673 | axolemma(GO:0030673) |
0.1 | 2.0 | GO:0030057 | desmosome(GO:0030057) |
0.1 | 1.9 | GO:0035253 | ciliary rootlet(GO:0035253) |
0.0 | 1.5 | GO:0031092 | platelet alpha granule membrane(GO:0031092) |
0.0 | 1.2 | GO:0031362 | anchored component of external side of plasma membrane(GO:0031362) |
0.0 | 1.0 | GO:0005865 | striated muscle thin filament(GO:0005865) |
0.0 | 1.0 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.1 | 0.7 | GO:0033256 | I-kappaB/NF-kappaB complex(GO:0033256) |
0.0 | 0.6 | GO:1990124 | messenger ribonucleoprotein complex(GO:1990124) |
0.0 | 0.6 | GO:0043194 | axon initial segment(GO:0043194) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.1 | GO:0005176 | ErbB-2 class receptor binding(GO:0005176) |
0.0 | 2.3 | GO:0019894 | kinesin binding(GO:0019894) |
0.0 | 1.7 | GO:0051428 | peptide hormone receptor binding(GO:0051428) |
0.0 | 1.2 | GO:0005104 | fibroblast growth factor receptor binding(GO:0005104) |
0.2 | 1.1 | GO:0038062 | protein tyrosine kinase collagen receptor activity(GO:0038062) |
0.2 | 1.1 | GO:0060961 | phospholipase D inhibitor activity(GO:0060961) |
0.1 | 1.1 | GO:0005005 | transmembrane-ephrin receptor activity(GO:0005005) |
0.0 | 1.1 | GO:0004012 | phospholipid-translocating ATPase activity(GO:0004012) |
0.0 | 1.0 | GO:0030296 | protein tyrosine kinase activator activity(GO:0030296) |
0.0 | 1.0 | GO:0005547 | phosphatidylinositol-3,4,5-trisphosphate binding(GO:0005547) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.6 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 2.0 | PID ALPHA SYNUCLEIN PATHWAY | Alpha-synuclein signaling |
0.0 | 1.5 | PID EPHB FWD PATHWAY | EPHB forward signaling |
0.0 | 1.3 | PID ARF6 PATHWAY | Arf6 signaling events |
0.0 | 1.3 | PID CD40 PATHWAY | CD40/CD40L signaling |
0.0 | 1.2 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 1.2 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 1.0 | PID NOTCH PATHWAY | Notch signaling pathway |
0.0 | 0.9 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 0.9 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.4 | REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING | Genes involved in Downregulation of ERBB2:ERBB3 signaling |
0.0 | 3.0 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.0 | 1.6 | REACTOME KINESINS | Genes involved in Kinesins |
0.0 | 1.5 | REACTOME L1CAM INTERACTIONS | Genes involved in L1CAM interactions |
0.1 | 1.4 | REACTOME SIGNALING BY FGFR3 MUTANTS | Genes involved in Signaling by FGFR3 mutants |
0.0 | 1.3 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.0 | 1.2 | REACTOME AMYLOIDS | Genes involved in Amyloids |
0.0 | 1.0 | REACTOME DEADENYLATION OF MRNA | Genes involved in Deadenylation of mRNA |
0.0 | 0.9 | REACTOME DCC MEDIATED ATTRACTIVE SIGNALING | Genes involved in DCC mediated attractive signaling |
0.0 | 0.8 | REACTOME UNBLOCKING OF NMDA RECEPTOR GLUTAMATE BINDING AND ACTIVATION | Genes involved in Unblocking of NMDA receptor, glutamate binding and activation |