Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSG00000158711.14 | ETS transcription factor ELK4 | |
ENSG00000244405.8 | ETS variant transcription factor 5 | |
ENSG00000126767.18 | ETS transcription factor ELK1 | |
ENSG00000111145.8 | ETS transcription factor ELK3 | |
ENSG00000102034.17 | E74 like ETS transcription factor 4 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ETV5 | hg38_v1_chr3_-_186108501_186108675 | 0.88 | 3.9e-03 | Click! |
ELF4 | hg38_v1_chrX_-_130110679_130110722 | -0.85 | 7.2e-03 | Click! |
ELK1 | hg38_v1_chrX_-_47650488_47650591 | 0.49 | 2.2e-01 | Click! |
ELK3 | hg38_v1_chr12_+_96194501_96194545 | -0.49 | 2.2e-01 | Click! |
ELK4 | hg38_v1_chr1_-_205631962_205632030 | 0.41 | 3.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr9_+_87498491 Show fit | 2.90 |
ENST00000622514.4
|
death associated protein kinase 1 |
|
chr2_+_24076817 Show fit | 2.22 |
ENST00000613899.4
|
family with sequence similarity 228 member B |
|
chr12_+_6944009 Show fit | 2.16 |
ENST00000229281.6
|
chromosome 12 open reading frame 57 |
|
chr6_+_30557274 Show fit | 2.15 |
ENST00000376557.3
|
proline rich 3 |
|
chr19_-_8832286 Show fit | 2.13 |
ENST00000601372.6
|
zinc finger protein 558 |
|
chr13_-_33185994 Show fit | 2.10 |
ENST00000255486.8
|
StAR related lipid transfer domain containing 13 |
|
chr6_+_30557287 Show fit | 2.03 |
ENST00000376560.8
|
proline rich 3 |
|
chr12_+_6943811 Show fit | 1.95 |
ENST00000544681.1
ENST00000537087.5 |
chromosome 12 open reading frame 57 |
|
chr12_-_54473568 Show fit | 1.79 |
ENST00000305879.8
|
gametocyte specific factor 1 |
|
chr5_+_95731300 Show fit | 1.77 |
ENST00000379982.8
|
Rho related BTB domain containing 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.2 | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane(GO:0006614) |
0.1 | 6.6 | GO:0070126 | mitochondrial translational termination(GO:0070126) |
0.8 | 5.8 | GO:0000720 | pyrimidine dimer repair by nucleotide-excision repair(GO:0000720) |
0.7 | 5.8 | GO:0021678 | third ventricle development(GO:0021678) |
0.1 | 5.1 | GO:0000413 | protein peptidyl-prolyl isomerization(GO:0000413) |
0.2 | 5.0 | GO:0071447 | cellular response to hydroperoxide(GO:0071447) |
0.1 | 4.7 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone(GO:0006120) |
0.0 | 4.1 | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER(GO:0006890) |
0.4 | 3.7 | GO:0006290 | pyrimidine dimer repair(GO:0006290) |
0.6 | 3.5 | GO:0006051 | mannosamine metabolic process(GO:0006050) N-acetylmannosamine metabolic process(GO:0006051) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.7 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.0 | 9.2 | GO:0005777 | peroxisome(GO:0005777) microbody(GO:0042579) |
0.1 | 6.1 | GO:0022627 | cytosolic small ribosomal subunit(GO:0022627) |
0.1 | 6.1 | GO:0015934 | large ribosomal subunit(GO:0015934) |
0.1 | 6.0 | GO:0005762 | organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762) |
0.7 | 5.8 | GO:0000110 | nucleotide-excision repair factor 1 complex(GO:0000110) |
0.2 | 5.4 | GO:0031083 | BLOC-1 complex(GO:0031083) |
0.0 | 5.2 | GO:0001726 | ruffle(GO:0001726) |
0.0 | 5.1 | GO:0005776 | autophagosome(GO:0005776) |
0.1 | 4.9 | GO:0005758 | mitochondrial intermembrane space(GO:0005758) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 20.0 | GO:0003700 | nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700) |
0.1 | 13.8 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.1 | 6.1 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.7 | 5.8 | GO:1990599 | 3' overhang single-stranded DNA endodeoxyribonuclease activity(GO:1990599) |
0.1 | 5.7 | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity(GO:0003755) |
0.1 | 5.1 | GO:0005484 | SNAP receptor activity(GO:0005484) |
0.1 | 4.9 | GO:0017075 | syntaxin-1 binding(GO:0017075) |
0.0 | 4.9 | GO:0051015 | actin filament binding(GO:0051015) |
0.1 | 4.5 | GO:0008137 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
0.2 | 3.6 | GO:0070513 | death domain binding(GO:0070513) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 11.0 | PID ERBB1 DOWNSTREAM PATHWAY | ErbB1 downstream signaling |
0.1 | 7.9 | PID NETRIN PATHWAY | Netrin-mediated signaling events |
0.0 | 5.8 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 4.0 | PID ARF 3PATHWAY | Arf1 pathway |
0.1 | 3.8 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.1 | 3.3 | SIG PIP3 SIGNALING IN B LYMPHOCYTES | Genes related to PIP3 signaling in B lymphocytes |
0.0 | 3.1 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 2.7 | PID HIV NEF PATHWAY | HIV-1 Nef: Negative effector of Fas and TNF-alpha |
0.0 | 2.6 | PID ERBB1 INTERNALIZATION PATHWAY | Internalization of ErbB1 |
0.0 | 2.5 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 30.2 | REACTOME GENERIC TRANSCRIPTION PATHWAY | Genes involved in Generic Transcription Pathway |
0.1 | 7.1 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.1 | 7.0 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.4 | 6.3 | REACTOME ROLE OF DCC IN REGULATING APOPTOSIS | Genes involved in Role of DCC in regulating apoptosis |
0.2 | 6.0 | REACTOME FORMATION OF INCISION COMPLEX IN GG NER | Genes involved in Formation of incision complex in GG-NER |
0.0 | 5.9 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.1 | 5.8 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.1 | 5.6 | REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX | Genes involved in Formation of the ternary complex, and subsequently, the 43S complex |
0.2 | 4.8 | REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING | Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening |
0.1 | 4.8 | REACTOME REGULATION OF ORNITHINE DECARBOXYLASE ODC | Genes involved in Regulation of ornithine decarboxylase (ODC) |