Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ERG | hg38_v1_chr21_-_38498415_38498519 | 0.85 | 8.2e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr15_+_43593054 Show fit | 4.91 |
ENST00000453782.5
ENST00000300283.10 ENST00000437924.5 |
creatine kinase, mitochondrial 1B |
|
chr17_+_50532713 Show fit | 3.83 |
ENST00000503690.5
ENST00000514874.5 ENST00000268933.8 |
epsin 3 |
|
chr4_+_40196907 Show fit | 3.10 |
ENST00000622175.4
ENST00000619474.4 ENST00000615083.4 ENST00000610353.4 ENST00000614836.1 |
ras homolog family member H |
|
chr13_-_20230970 Show fit | 3.05 |
ENST00000644667.1
ENST00000646108.1 |
gap junction protein beta 6 |
|
chr15_+_43692886 Show fit | 2.96 |
ENST00000434505.5
ENST00000411750.5 |
creatine kinase, mitochondrial 1A |
|
chr11_-_118252279 Show fit | 2.91 |
ENST00000525386.5
ENST00000527472.1 ENST00000278949.9 |
myelin protein zero like 3 |
|
chr1_-_11654422 Show fit | 2.57 |
ENST00000354287.5
|
F-box protein 2 |
|
chr12_-_52493250 Show fit | 2.45 |
ENST00000330722.7
|
keratin 6A |
|
chr6_+_125153846 Show fit | 2.41 |
ENST00000528193.5
|
TPD52 like 1 |
|
chr1_+_153357846 Show fit | 2.37 |
ENST00000368738.4
|
S100 calcium binding protein A9 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 8.8 | GO:0035590 | purinergic nucleotide receptor signaling pathway(GO:0035590) |
0.1 | 7.2 | GO:0034260 | negative regulation of GTPase activity(GO:0034260) |
0.0 | 5.6 | GO:0000086 | G2/M transition of mitotic cell cycle(GO:0000086) |
0.0 | 5.5 | GO:0070126 | mitochondrial translational termination(GO:0070126) |
0.5 | 3.7 | GO:0010482 | epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482) |
0.1 | 3.7 | GO:0042554 | superoxide anion generation(GO:0042554) |
0.2 | 3.4 | GO:0045741 | positive regulation of epidermal growth factor-activated receptor activity(GO:0045741) |
0.2 | 3.3 | GO:0046415 | urate metabolic process(GO:0046415) |
0.2 | 3.3 | GO:0045618 | positive regulation of keratinocyte differentiation(GO:0045618) |
0.0 | 3.3 | GO:0030032 | lamellipodium assembly(GO:0030032) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.1 | GO:0001772 | immunological synapse(GO:0001772) |
0.0 | 8.5 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.1 | 8.1 | GO:0030134 | ER to Golgi transport vesicle(GO:0030134) |
0.1 | 7.1 | GO:0001533 | cornified envelope(GO:0001533) |
0.0 | 5.7 | GO:0005913 | cell-cell adherens junction(GO:0005913) |
0.1 | 5.4 | GO:0032580 | Golgi cisterna membrane(GO:0032580) |
0.1 | 5.1 | GO:0019005 | SCF ubiquitin ligase complex(GO:0019005) |
0.0 | 5.0 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.2 | 4.8 | GO:0005639 | integral component of nuclear inner membrane(GO:0005639) intrinsic component of nuclear inner membrane(GO:0031229) |
0.0 | 4.6 | GO:0070821 | tertiary granule membrane(GO:0070821) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.1 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.2 | 6.6 | GO:0005095 | GTPase inhibitor activity(GO:0005095) |
0.1 | 5.0 | GO:0004864 | protein phosphatase inhibitor activity(GO:0004864) |
0.0 | 4.8 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
0.4 | 4.7 | GO:0004931 | extracellular ATP-gated cation channel activity(GO:0004931) ATP-gated ion channel activity(GO:0035381) |
0.1 | 4.7 | GO:0005154 | epidermal growth factor receptor binding(GO:0005154) |
0.1 | 3.3 | GO:0000175 | 3'-5'-exoribonuclease activity(GO:0000175) |
0.0 | 3.3 | GO:0005070 | SH3/SH2 adaptor activity(GO:0005070) |
0.1 | 3.2 | GO:0050321 | tau-protein kinase activity(GO:0050321) |
0.3 | 3.1 | GO:0016176 | superoxide-generating NADPH oxidase activator activity(GO:0016176) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.1 | PID P73PATHWAY | p73 transcription factor network |
0.0 | 8.1 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 5.8 | SA B CELL RECEPTOR COMPLEXES | Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases. |
0.1 | 4.9 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.1 | 4.0 | PID ALPHA SYNUCLEIN PATHWAY | Alpha-synuclein signaling |
0.0 | 3.7 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.1 | 3.3 | ST PHOSPHOINOSITIDE 3 KINASE PATHWAY | PI3K Pathway |
0.0 | 3.1 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.1 | 2.5 | SA REG CASCADE OF CYCLIN EXPR | Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. |
0.0 | 2.3 | PID ARF6 PATHWAY | Arf6 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 14.1 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.0 | 8.9 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.1 | 8.4 | REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS | Genes involved in Golgi Associated Vesicle Biogenesis |
0.1 | 5.6 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.1 | 5.2 | REACTOME MITOCHONDRIAL PROTEIN IMPORT | Genes involved in Mitochondrial Protein Import |
0.1 | 4.2 | REACTOME DCC MEDIATED ATTRACTIVE SIGNALING | Genes involved in DCC mediated attractive signaling |
0.2 | 3.7 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.1 | 3.7 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.1 | 3.0 | REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS | Genes involved in Proteolytic cleavage of SNARE complex proteins |
0.1 | 3.0 | REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION | Genes involved in SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription |