Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ESRRA | hg38_v1_chr11_+_64306227_64306446, hg38_v1_chr11_+_64305497_64305532 | 0.93 | 7.9e-04 | Click! |
ESR2 | hg38_v1_chr14_-_64338096_64338124 | -0.81 | 1.5e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr20_+_59676661 Show fit | 4.04 |
ENST00000355648.8
|
phosphatase and actin regulator 3 |
|
chr20_+_59577463 Show fit | 3.30 |
ENST00000359926.7
|
phosphatase and actin regulator 3 |
|
chr17_-_41521719 Show fit | 3.17 |
ENST00000393976.6
|
keratin 15 |
|
chr2_-_237590660 Show fit | 2.95 |
ENST00000409576.1
|
RAB17, member RAS oncogene family |
|
chr14_+_21057822 Show fit | 2.93 |
ENST00000308227.2
|
ribonuclease A family member 8 |
|
chr12_-_52452139 Show fit | 2.51 |
ENST00000252252.4
|
keratin 6B |
|
chr10_+_116427839 Show fit | 2.38 |
ENST00000369230.4
|
pancreatic lipase related protein 3 |
|
chr22_+_44677044 Show fit | 2.26 |
ENST00000006251.11
|
proline rich 5 |
|
chr22_+_44677077 Show fit | 2.18 |
ENST00000403581.5
|
proline rich 5 |
|
chr2_-_237590694 Show fit | 2.11 |
ENST00000264601.8
ENST00000411462.5 ENST00000409822.1 |
RAB17, member RAS oncogene family |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 15.5 | GO:0070268 | cornification(GO:0070268) |
0.1 | 8.2 | GO:0070126 | mitochondrial translational termination(GO:0070126) |
0.5 | 7.6 | GO:0038203 | TORC2 signaling(GO:0038203) |
0.4 | 5.0 | GO:0070257 | positive regulation of mucus secretion(GO:0070257) |
1.6 | 4.9 | GO:0002415 | immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor(GO:0002415) |
0.2 | 4.9 | GO:0030150 | protein import into mitochondrial matrix(GO:0030150) |
1.1 | 4.6 | GO:0042361 | menaquinone catabolic process(GO:0042361) vitamin K catabolic process(GO:0042377) |
0.3 | 4.3 | GO:0090361 | platelet-derived growth factor production(GO:0090360) regulation of platelet-derived growth factor production(GO:0090361) |
0.3 | 4.2 | GO:0048875 | chemical homeostasis within a tissue(GO:0048875) |
0.5 | 4.1 | GO:0031444 | slow-twitch skeletal muscle fiber contraction(GO:0031444) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 9.7 | GO:0005861 | troponin complex(GO:0005861) |
0.0 | 8.8 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.0 | 8.3 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.3 | 7.8 | GO:0031932 | TORC2 complex(GO:0031932) |
0.0 | 7.2 | GO:0016363 | nuclear matrix(GO:0016363) |
0.1 | 6.7 | GO:0045095 | keratin filament(GO:0045095) |
0.2 | 6.0 | GO:0014731 | spectrin-associated cytoskeleton(GO:0014731) |
0.2 | 5.9 | GO:0030057 | desmosome(GO:0030057) |
0.1 | 5.0 | GO:0005762 | organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762) |
0.1 | 4.8 | GO:0016327 | apicolateral plasma membrane(GO:0016327) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 10.8 | GO:0008157 | protein phosphatase 1 binding(GO:0008157) |
0.6 | 9.0 | GO:0031014 | troponin T binding(GO:0031014) |
0.0 | 8.9 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.0 | 8.5 | GO:0001228 | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228) |
0.3 | 6.2 | GO:0045028 | G-protein coupled nucleotide receptor activity(GO:0001608) G-protein coupled purinergic nucleotide receptor activity(GO:0045028) |
0.1 | 5.9 | GO:0019003 | GDP binding(GO:0019003) |
0.2 | 5.3 | GO:0098641 | cadherin binding involved in cell-cell adhesion(GO:0098641) |
0.0 | 5.2 | GO:0017124 | SH3 domain binding(GO:0017124) |
0.2 | 4.6 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
0.1 | 4.1 | GO:0097110 | scaffold protein binding(GO:0097110) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.1 | PID P73PATHWAY | p73 transcription factor network |
0.1 | 10.0 | PID MTOR 4PATHWAY | mTOR signaling pathway |
0.3 | 5.9 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 5.8 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.1 | 5.3 | PID FGF PATHWAY | FGF signaling pathway |
0.1 | 5.0 | PID IFNG PATHWAY | IFN-gamma pathway |
0.1 | 4.7 | PID IL3 PATHWAY | IL3-mediated signaling events |
0.0 | 4.4 | PID ERBB1 DOWNSTREAM PATHWAY | ErbB1 downstream signaling |
0.1 | 3.4 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.1 | 3.1 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 12.6 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.2 | 11.1 | REACTOME MITOCHONDRIAL PROTEIN IMPORT | Genes involved in Mitochondrial Protein Import |
0.1 | 9.2 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 5.5 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.1 | 5.1 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.2 | 4.3 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.1 | 4.3 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.0 | 4.1 | REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS | Genes involved in Golgi Associated Vesicle Biogenesis |
0.2 | 3.9 | REACTOME FGFR2C LIGAND BINDING AND ACTIVATION | Genes involved in FGFR2c ligand binding and activation |
0.1 | 3.8 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |