Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSG00000006468.14 | ETS variant transcription factor 1 | |
ENSG00000105722.10 | ETS2 repressor factor | |
ENSG00000163497.3 | FEV transcription factor, ETS family member | |
ENSG00000120690.16 | E74 like ETS transcription factor 1 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ETV1 | hg38_v1_chr7_-_13986439_13986466 | 0.91 | 1.5e-03 | Click! |
ELF1 | hg38_v1_chr13_-_41019289_41019343 | -0.60 | 1.2e-01 | Click! |
ERF | hg38_v1_chr19_-_42255119_42255137 | -0.59 | 1.2e-01 | Click! |
FEV | hg38_v1_chr2_-_218985176_218985205 | -0.39 | 3.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_+_95731300 Show fit | 2.60 |
ENST00000379982.8
|
Rho related BTB domain containing 3 |
|
chr12_-_54473568 Show fit | 2.26 |
ENST00000305879.8
|
gametocyte specific factor 1 |
|
chr13_-_33185994 Show fit | 1.98 |
ENST00000255486.8
|
StAR related lipid transfer domain containing 13 |
|
chr6_+_31652414 Show fit | 1.93 |
ENST00000375918.6
ENST00000375920.8 |
apolipoprotein M |
|
chr6_+_30557274 Show fit | 1.81 |
ENST00000376557.3
|
proline rich 3 |
|
chr19_-_8832286 Show fit | 1.75 |
ENST00000601372.6
|
zinc finger protein 558 |
|
chr6_+_30557287 Show fit | 1.69 |
ENST00000376560.8
|
proline rich 3 |
|
chr4_-_39638893 Show fit | 1.61 |
ENST00000511809.5
ENST00000505729.1 |
small integral membrane protein 14 |
|
chr5_+_181223270 Show fit | 1.51 |
ENST00000315073.10
ENST00000351937.9 |
tripartite motif containing 41 |
|
chr16_+_20806517 Show fit | 1.49 |
ENST00000348433.10
ENST00000568501.5 ENST00000261377.11 ENST00000566276.5 |
RNA exonuclease 5 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 4.5 | GO:0000720 | pyrimidine dimer repair by nucleotide-excision repair(GO:0000720) |
0.1 | 4.3 | GO:0000413 | protein peptidyl-prolyl isomerization(GO:0000413) |
0.0 | 4.3 | GO:0042147 | retrograde transport, endosome to Golgi(GO:0042147) |
0.5 | 3.9 | GO:0021678 | third ventricle development(GO:0021678) |
0.0 | 3.6 | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane(GO:0006614) |
0.6 | 3.2 | GO:0003065 | positive regulation of heart rate by epinephrine(GO:0003065) |
0.7 | 3.0 | GO:0090301 | regulation of neural crest formation(GO:0090299) negative regulation of neural crest formation(GO:0090301) negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation(GO:2000314) |
0.5 | 2.9 | GO:0006050 | mannosamine metabolic process(GO:0006050) N-acetylmannosamine metabolic process(GO:0006051) |
0.4 | 2.9 | GO:0018103 | protein C-linked glycosylation(GO:0018103) peptidyl-tryptophan modification(GO:0018211) protein C-linked glycosylation via tryptophan(GO:0018317) protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan(GO:0018406) |
0.1 | 2.9 | GO:0042135 | neurotransmitter catabolic process(GO:0042135) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 4.5 | GO:0000110 | nucleotide-excision repair factor 1 complex(GO:0000110) |
0.0 | 4.5 | GO:0001726 | ruffle(GO:0001726) |
0.0 | 3.9 | GO:0005776 | autophagosome(GO:0005776) |
0.0 | 3.8 | GO:0032588 | trans-Golgi network membrane(GO:0032588) |
0.2 | 3.7 | GO:0031588 | nucleotide-activated protein kinase complex(GO:0031588) |
0.0 | 3.5 | GO:0030670 | phagocytic vesicle membrane(GO:0030670) |
0.2 | 3.3 | GO:0005862 | muscle thin filament tropomyosin(GO:0005862) |
0.0 | 3.2 | GO:0022627 | cytosolic small ribosomal subunit(GO:0022627) |
0.1 | 2.8 | GO:0005885 | Arp2/3 protein complex(GO:0005885) |
0.0 | 2.7 | GO:0031093 | platelet alpha granule lumen(GO:0031093) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.2 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.0 | 5.2 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.1 | 4.6 | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity(GO:0003755) |
0.6 | 4.5 | GO:1990599 | 3' overhang single-stranded DNA endodeoxyribonuclease activity(GO:1990599) |
0.2 | 4.1 | GO:0070513 | death domain binding(GO:0070513) |
0.0 | 3.7 | GO:0019902 | phosphatase binding(GO:0019902) |
0.0 | 3.2 | GO:0001104 | RNA polymerase II transcription cofactor activity(GO:0001104) |
0.0 | 3.2 | GO:0003713 | transcription coactivator activity(GO:0003713) |
0.7 | 2.9 | GO:0045127 | N-acetylglucosamine kinase activity(GO:0045127) |
0.1 | 2.9 | GO:0000030 | mannosyltransferase activity(GO:0000030) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.6 | PID P53 REGULATION PATHWAY | p53 pathway |
0.1 | 2.7 | PID ARF 3PATHWAY | Arf1 pathway |
0.0 | 2.5 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.0 | 2.1 | PID TRAIL PATHWAY | TRAIL signaling pathway |
0.0 | 1.9 | PID HIV NEF PATHWAY | HIV-1 Nef: Negative effector of Fas and TNF-alpha |
0.0 | 1.9 | PID NETRIN PATHWAY | Netrin-mediated signaling events |
0.1 | 1.8 | PID S1P S1P4 PATHWAY | S1P4 pathway |
0.1 | 1.7 | SA PTEN PATHWAY | PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate. |
0.0 | 1.7 | PID VEGFR1 2 PATHWAY | Signaling events mediated by VEGFR1 and VEGFR2 |
0.0 | 1.6 | PID HIF2PATHWAY | HIF-2-alpha transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 14.2 | REACTOME GENERIC TRANSCRIPTION PATHWAY | Genes involved in Generic Transcription Pathway |
0.1 | 5.6 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.1 | 4.2 | REACTOME FORMATION OF INCISION COMPLEX IN GG NER | Genes involved in Formation of incision complex in GG-NER |
0.1 | 3.6 | REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING | Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening |
0.2 | 3.2 | REACTOME ALPHA LINOLENIC ACID ALA METABOLISM | Genes involved in alpha-linolenic acid (ALA) metabolism |
0.2 | 3.2 | REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK | Genes involved in Regulation of Rheb GTPase activity by AMPK |
0.0 | 2.8 | REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX | Genes involved in Formation of the ternary complex, and subsequently, the 43S complex |
0.0 | 2.8 | REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION | Genes involved in Influenza Viral RNA Transcription and Replication |
0.0 | 2.8 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.0 | 2.6 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |