Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
FOXI1 | hg38_v1_chr5_+_170105892_170105913 | 0.67 | 6.6e-02 | Click! |
FOXF1 | hg38_v1_chr16_+_86510507_86510539 | -0.66 | 7.4e-02 | Click! |
FOXD3 | hg38_v1_chr1_+_63322558_63322583 | -0.07 | 8.7e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr9_-_92482350 Show fit | 1.65 |
ENST00000375543.2
|
asporin |
|
chr8_-_107497909 Show fit | 1.18 |
ENST00000517746.6
|
angiopoietin 1 |
|
chr8_-_107498041 Show fit | 1.17 |
ENST00000297450.7
|
angiopoietin 1 |
|
chr12_-_14885845 Show fit | 1.12 |
ENST00000539261.6
ENST00000228938.5 |
matrix Gla protein |
|
chr8_+_96584920 Show fit | 1.12 |
ENST00000521590.5
|
syndecan 2 |
|
chr17_-_19387170 Show fit | 1.07 |
ENST00000395592.6
ENST00000299610.5 |
microfibril associated protein 4 |
|
chr18_-_54959391 Show fit | 0.88 |
ENST00000591504.6
|
coiled-coil domain containing 68 |
|
chr4_-_185775271 Show fit | 0.78 |
ENST00000430503.5
ENST00000319454.10 ENST00000450341.5 |
sorbin and SH3 domain containing 2 |
|
chr11_-_111910888 Show fit | 0.64 |
ENST00000525823.1
ENST00000528961.6 |
crystallin alpha B |
|
chr11_-_111910790 Show fit | 0.61 |
ENST00000533280.6
|
crystallin alpha B |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 2.4 | GO:0035691 | macrophage migration inhibitory factor signaling pathway(GO:0035691) |
0.3 | 1.9 | GO:0070171 | negative regulation of tooth mineralization(GO:0070171) |
0.1 | 1.7 | GO:0007021 | tubulin complex assembly(GO:0007021) |
0.2 | 1.4 | GO:0008218 | bioluminescence(GO:0008218) |
0.1 | 1.1 | GO:0048251 | elastic fiber assembly(GO:0048251) |
0.0 | 1.1 | GO:0001502 | cartilage condensation(GO:0001502) |
0.1 | 1.0 | GO:0043932 | ossification involved in bone remodeling(GO:0043932) |
0.1 | 1.0 | GO:1902748 | positive regulation of lens fiber cell differentiation(GO:1902748) |
0.1 | 1.0 | GO:0008627 | intrinsic apoptotic signaling pathway in response to osmotic stress(GO:0008627) |
0.1 | 0.9 | GO:0051138 | positive regulation of NK T cell differentiation(GO:0051138) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.6 | GO:0005902 | microvillus(GO:0005902) |
0.1 | 1.8 | GO:0097512 | cardiac myofibril(GO:0097512) |
0.0 | 1.8 | GO:0005796 | Golgi lumen(GO:0005796) |
0.1 | 1.1 | GO:0071953 | elastic fiber(GO:0071953) |
0.0 | 0.9 | GO:0033270 | paranode region of axon(GO:0033270) |
0.0 | 0.7 | GO:0032839 | dendrite cytoplasm(GO:0032839) |
0.0 | 0.6 | GO:0005589 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 0.4 | GO:0030478 | actin cap(GO:0030478) |
0.0 | 0.3 | GO:0001652 | granular component(GO:0001652) |
0.0 | 0.3 | GO:0005579 | membrane attack complex(GO:0005579) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.7 | GO:0005518 | collagen binding(GO:0005518) |
0.1 | 1.8 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.0 | 1.7 | GO:0030971 | receptor tyrosine kinase binding(GO:0030971) |
0.0 | 1.4 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.0 | 1.0 | GO:0008093 | cytoskeletal adaptor activity(GO:0008093) |
0.0 | 1.0 | GO:0070412 | R-SMAD binding(GO:0070412) |
0.0 | 0.9 | GO:1905030 | voltage-gated sodium channel activity(GO:0005248) voltage-gated ion channel activity involved in regulation of postsynaptic membrane potential(GO:1905030) |
0.0 | 0.9 | GO:0017147 | Wnt-protein binding(GO:0017147) |
0.1 | 0.8 | GO:0001206 | transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001206) |
0.1 | 0.5 | GO:0047391 | alkylglycerophosphoethanolamine phosphodiesterase activity(GO:0047391) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.6 | PID SHP2 PATHWAY | SHP2 signaling |
0.0 | 2.7 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 1.1 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 0.9 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 0.5 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 0.3 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.0 | 0.2 | SA G2 AND M PHASES | Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.2 | REACTOME TIE2 SIGNALING | Genes involved in Tie2 Signaling |
0.0 | 1.4 | REACTOME HS GAG DEGRADATION | Genes involved in HS-GAG degradation |
0.0 | 0.9 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.0 | 0.6 | REACTOME A TETRASACCHARIDE LINKER SEQUENCE IS REQUIRED FOR GAG SYNTHESIS | Genes involved in A tetrasaccharide linker sequence is required for GAG synthesis |
0.0 | 0.4 | REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS | Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins |
0.0 | 0.4 | REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS | Genes involved in Ionotropic activity of Kainate Receptors |
0.0 | 0.2 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.0 | 0.2 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |
0.0 | 0.0 | REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE | Genes involved in Regulation of Insulin Secretion by Acetylcholine |