Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TBL1XR1 | hg38_v1_chr3_-_177197210_177197233 | -0.82 | 1.3e-02 | Click! |
FOXM1 | hg38_v1_chr12_-_2876986_2877092, hg38_v1_chr12_-_2877113_2877182 | -0.81 | 1.5e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr18_+_63887698 Show fit | 2.58 |
ENST00000457692.5
ENST00000299502.9 ENST00000413956.5 |
serpin family B member 2 |
|
chr2_+_101991953 Show fit | 2.02 |
ENST00000332549.8
|
interleukin 1 receptor type 2 |
|
chr18_+_31447732 Show fit | 1.69 |
ENST00000257189.5
|
desmoglein 3 |
|
chr6_+_26500296 Show fit | 1.59 |
ENST00000684113.1
|
butyrophilin subfamily 1 member A1 |
|
chr19_-_50953093 Show fit | 1.53 |
ENST00000593428.5
|
kallikrein related peptidase 5 |
|
chr19_-_50953063 Show fit | 1.44 |
ENST00000391809.6
|
kallikrein related peptidase 5 |
|
chr2_+_102008515 Show fit | 1.25 |
ENST00000441002.1
|
interleukin 1 receptor type 2 |
|
chr19_-_50952942 Show fit | 1.24 |
ENST00000594846.1
ENST00000336334.8 |
kallikrein related peptidase 5 |
|
chr7_+_37848597 Show fit | 1.24 |
ENST00000199447.9
ENST00000455500.5 |
NME/NM23 family member 8 |
|
chr11_-_102780620 Show fit | 1.13 |
ENST00000279441.9
ENST00000539681.1 |
matrix metallopeptidase 10 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.2 | GO:0070268 | cornification(GO:0070268) |
0.0 | 6.7 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
0.9 | 5.2 | GO:0002225 | positive regulation of antimicrobial peptide production(GO:0002225) positive regulation of antibacterial peptide production(GO:0002803) |
0.1 | 5.0 | GO:0060216 | definitive hemopoiesis(GO:0060216) |
0.9 | 3.5 | GO:0032690 | negative regulation of interleukin-1 alpha production(GO:0032690) negative regulation of interleukin-1 alpha secretion(GO:0050712) |
0.1 | 3.4 | GO:0042730 | fibrinolysis(GO:0042730) |
0.1 | 3.2 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
0.0 | 2.4 | GO:0050911 | detection of chemical stimulus involved in sensory perception of smell(GO:0050911) |
0.2 | 2.2 | GO:0070673 | response to interleukin-18(GO:0070673) |
0.1 | 2.2 | GO:0032463 | negative regulation of protein homooligomerization(GO:0032463) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 78.7 | GO:0016021 | integral component of membrane(GO:0016021) |
0.8 | 5.8 | GO:0097209 | epidermal lamellar body(GO:0097209) |
0.1 | 5.6 | GO:0001533 | cornified envelope(GO:0001533) |
0.0 | 5.3 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.2 | 5.1 | GO:0043205 | microfibril(GO:0001527) fibril(GO:0043205) |
0.0 | 3.3 | GO:0035577 | azurophil granule membrane(GO:0035577) |
0.0 | 2.9 | GO:0035579 | specific granule membrane(GO:0035579) |
0.1 | 2.4 | GO:0005922 | connexon complex(GO:0005922) |
0.1 | 2.3 | GO:0016327 | apicolateral plasma membrane(GO:0016327) |
0.0 | 2.0 | GO:0030134 | ER to Golgi transport vesicle(GO:0030134) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 13.9 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.1 | 8.6 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.0 | 4.3 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.7 | 3.4 | GO:0004910 | interleukin-1, Type II, blocking receptor activity(GO:0004910) |
0.2 | 3.4 | GO:0001011 | transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087) |
0.1 | 2.0 | GO:0046625 | sphingolipid binding(GO:0046625) |
0.1 | 2.0 | GO:0045499 | chemorepellent activity(GO:0045499) |
0.1 | 2.0 | GO:0019198 | transmembrane receptor protein tyrosine phosphatase activity(GO:0005001) transmembrane receptor protein phosphatase activity(GO:0019198) |
0.1 | 1.9 | GO:0004190 | aspartic-type endopeptidase activity(GO:0004190) aspartic-type peptidase activity(GO:0070001) |
0.0 | 1.9 | GO:0005109 | frizzled binding(GO:0005109) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 10.8 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 4.4 | PID NOTCH PATHWAY | Notch signaling pathway |
0.0 | 3.8 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.1 | 3.5 | PID INTEGRIN3 PATHWAY | Beta3 integrin cell surface interactions |
0.1 | 2.9 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.1 | 2.7 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.1 | 2.4 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.0 | 2.1 | PID ALPHA SYNUCLEIN PATHWAY | Alpha-synuclein signaling |
0.0 | 2.1 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.1 | 2.0 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.3 | REACTOME IL1 SIGNALING | Genes involved in Interleukin-1 signaling |
0.0 | 4.3 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.1 | 2.8 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.1 | 2.5 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.0 | 2.3 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
0.1 | 2.1 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |
0.0 | 2.1 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.1 | 1.9 | REACTOME TRANSPORT OF ORGANIC ANIONS | Genes involved in Transport of organic anions |
0.0 | 1.9 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.0 | 1.9 | REACTOME CELL JUNCTION ORGANIZATION | Genes involved in Cell junction organization |