Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
FOXO3 | hg38_v1_chr6_+_108559742_108559835, hg38_v1_chr6_+_108560906_108560970 | -0.95 | 3.0e-04 | Click! |
FOXD2 | hg38_v1_chr1_+_47438036_47438112 | 0.43 | 2.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr8_+_31639755 Show fit | 5.62 |
ENST00000520407.5
|
neuregulin 1 |
|
chr8_+_94641145 Show fit | 3.09 |
ENST00000433389.8
ENST00000358397.9 |
epithelial splicing regulatory protein 1 |
|
chr6_-_136526177 Show fit | 3.06 |
ENST00000617204.4
|
microtubule associated protein 7 |
|
chr8_+_94641074 Show fit | 2.96 |
ENST00000423620.6
|
epithelial splicing regulatory protein 1 |
|
chr8_+_94641199 Show fit | 2.86 |
ENST00000646773.1
ENST00000454170.7 |
epithelial splicing regulatory protein 1 |
|
chr10_+_80413817 Show fit | 2.85 |
ENST00000372187.9
|
peroxiredoxin like 2A |
|
chr6_-_136525961 Show fit | 2.63 |
ENST00000438100.6
|
microtubule associated protein 7 |
|
chr6_+_125219804 Show fit | 2.49 |
ENST00000524679.1
|
TPD52 like 1 |
|
chr6_-_136526472 Show fit | 2.41 |
ENST00000454590.5
ENST00000432797.6 |
microtubule associated protein 7 |
|
chr11_+_10455292 Show fit | 2.36 |
ENST00000396553.6
|
adenosine monophosphate deaminase 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 9.6 | GO:0038129 | directional guidance of interneurons involved in migration from the subpallium to the cortex(GO:0021840) chemorepulsion involved in interneuron migration from the subpallium to the cortex(GO:0021842) ERBB3 signaling pathway(GO:0038129) |
0.0 | 8.7 | GO:0008543 | fibroblast growth factor receptor signaling pathway(GO:0008543) |
0.1 | 8.4 | GO:0006970 | response to osmotic stress(GO:0006970) |
0.2 | 7.1 | GO:0032331 | negative regulation of chondrocyte differentiation(GO:0032331) |
0.4 | 3.1 | GO:0061709 | reticulophagy(GO:0061709) |
0.2 | 3.1 | GO:0014809 | regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion(GO:0014809) |
0.7 | 2.9 | GO:0032913 | B cell receptor transport within lipid bilayer(GO:0032595) B cell receptor transport into membrane raft(GO:0032597) protein transport out of membrane raft(GO:0032599) chemokine receptor transport out of membrane raft(GO:0032600) negative regulation of transforming growth factor beta3 production(GO:0032913) chemokine receptor transport within lipid bilayer(GO:0033606) |
0.0 | 2.9 | GO:0065004 | protein-DNA complex assembly(GO:0065004) |
0.4 | 2.4 | GO:0006196 | AMP catabolic process(GO:0006196) |
0.2 | 2.4 | GO:0032782 | bile acid secretion(GO:0032782) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 10.2 | GO:0005875 | microtubule associated complex(GO:0005875) |
0.2 | 9.5 | GO:0030673 | axolemma(GO:0030673) |
0.2 | 3.1 | GO:0016013 | syntrophin complex(GO:0016013) |
0.1 | 2.7 | GO:0031362 | anchored component of external side of plasma membrane(GO:0031362) |
0.0 | 2.5 | GO:0005801 | cis-Golgi network(GO:0005801) |
0.1 | 2.4 | GO:0035253 | ciliary rootlet(GO:0035253) |
0.2 | 2.3 | GO:0046581 | intercellular canaliculus(GO:0046581) |
0.0 | 2.3 | GO:0101002 | ficolin-1-rich granule(GO:0101002) ficolin-1-rich granule lumen(GO:1904813) |
0.0 | 2.2 | GO:0032993 | protein-DNA complex(GO:0032993) |
0.1 | 2.0 | GO:0016327 | apicolateral plasma membrane(GO:0016327) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 9.6 | GO:0005176 | ErbB-2 class receptor binding(GO:0005176) |
0.0 | 8.7 | GO:0003729 | mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822) |
0.1 | 6.8 | GO:0051428 | peptide hormone receptor binding(GO:0051428) |
0.2 | 4.7 | GO:0002162 | dystroglycan binding(GO:0002162) |
0.2 | 4.0 | GO:0001011 | transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087) |
0.1 | 2.9 | GO:0030296 | protein tyrosine kinase activator activity(GO:0030296) |
0.0 | 2.9 | GO:0019894 | kinesin binding(GO:0019894) |
0.1 | 2.6 | GO:0008157 | protein phosphatase 1 binding(GO:0008157) |
0.3 | 2.4 | GO:0003876 | AMP deaminase activity(GO:0003876) adenosine-phosphate deaminase activity(GO:0047623) |
0.3 | 2.1 | GO:0086083 | cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication(GO:0086083) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 9.9 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.2 | 6.6 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 2.6 | PID LKB1 PATHWAY | LKB1 signaling events |
0.0 | 2.6 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 2.4 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.0 | 1.9 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.0 | 1.7 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
0.0 | 1.6 | PID TGFBR PATHWAY | TGF-beta receptor signaling |
0.0 | 1.5 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.0 | 1.4 | PID IL3 PATHWAY | IL3-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 9.6 | REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING | Genes involved in Downregulation of ERBB2:ERBB3 signaling |
0.0 | 6.6 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.0 | 3.3 | REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS | Genes involved in Golgi Associated Vesicle Biogenesis |
0.0 | 3.2 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 3.2 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
0.0 | 3.1 | REACTOME L1CAM INTERACTIONS | Genes involved in L1CAM interactions |
0.1 | 2.9 | REACTOME KINESINS | Genes involved in Kinesins |
0.0 | 2.6 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
0.1 | 2.4 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.1 | 2.2 | REACTOME FGFR2C LIGAND BINDING AND ACTIVATION | Genes involved in FGFR2c ligand binding and activation |