Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
FOXQ1 | hg38_v1_chr6_+_1312090_1312105 | -0.84 | 9.1e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_91180365 Show fit | 2.92 |
ENST00000547937.5
|
decorin |
|
chr2_+_151357583 Show fit | 2.01 |
ENST00000243347.5
|
TNF alpha induced protein 6 |
|
chr3_+_157436842 Show fit | 1.93 |
ENST00000295927.4
|
pentraxin 3 |
|
chr2_-_187554351 Show fit | 1.55 |
ENST00000437725.5
ENST00000409676.5 ENST00000233156.9 ENST00000339091.8 ENST00000420747.1 |
tissue factor pathway inhibitor |
|
chr1_-_72100930 Show fit | 1.52 |
ENST00000306821.3
|
neuronal growth regulator 1 |
|
chr5_-_20575850 Show fit | 1.46 |
ENST00000507958.5
|
cadherin 18 |
|
chr5_+_141150012 Show fit | 1.39 |
ENST00000231136.4
ENST00000622991.1 |
protocadherin beta 6 |
|
chr4_-_69760596 Show fit | 1.25 |
ENST00000510821.1
|
sulfotransferase family 1B member 1 |
|
chr1_-_56579555 Show fit | 1.15 |
ENST00000371250.4
|
phospholipid phosphatase 3 |
|
chr2_-_189179754 Show fit | 1.12 |
ENST00000374866.9
ENST00000618828.1 |
collagen type V alpha 2 chain |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.0 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.1 | 2.5 | GO:0006068 | ethanol catabolic process(GO:0006068) |
0.6 | 1.9 | GO:1903015 | regulation of exo-alpha-sialidase activity(GO:1903015) |
0.0 | 1.9 | GO:0050728 | negative regulation of inflammatory response(GO:0050728) |
0.0 | 1.8 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
0.2 | 1.7 | GO:0007598 | blood coagulation, extrinsic pathway(GO:0007598) |
0.0 | 1.7 | GO:0016339 | calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0016339) |
0.0 | 1.3 | GO:0006501 | C-terminal protein lipidation(GO:0006501) |
0.4 | 1.1 | GO:1903225 | negative regulation of endodermal cell differentiation(GO:1903225) |
0.1 | 1.1 | GO:0008354 | germ cell migration(GO:0008354) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.9 | GO:1904724 | tertiary granule lumen(GO:1904724) |
0.0 | 3.4 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.2 | 2.9 | GO:0005589 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.3 | 1.7 | GO:0034680 | integrin alpha10-beta1 complex(GO:0034680) |
0.0 | 1.2 | GO:0005796 | Golgi lumen(GO:0005796) |
0.4 | 1.1 | GO:0005588 | collagen type V trimer(GO:0005588) |
0.1 | 1.0 | GO:0017059 | serine C-palmitoyltransferase complex(GO:0017059) endoplasmic reticulum palmitoyltransferase complex(GO:0031211) |
0.2 | 0.8 | GO:0097629 | extrinsic component of omegasome membrane(GO:0097629) |
0.0 | 0.8 | GO:0008023 | transcription elongation factor complex(GO:0008023) |
0.1 | 0.7 | GO:0000137 | Golgi cis cisterna(GO:0000137) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.8 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.1 | 2.5 | GO:0004062 | aryl sulfotransferase activity(GO:0004062) |
0.2 | 2.0 | GO:0001849 | complement component C1q binding(GO:0001849) |
0.1 | 2.0 | GO:0005540 | hyaluronic acid binding(GO:0005540) |
0.2 | 1.7 | GO:0098639 | collagen binding involved in cell-matrix adhesion(GO:0098639) |
0.2 | 1.1 | GO:0042392 | sphingosine-1-phosphate phosphatase activity(GO:0042392) |
0.0 | 1.1 | GO:0004862 | cAMP-dependent protein kinase inhibitor activity(GO:0004862) |
0.2 | 1.0 | GO:0004758 | serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454) |
0.1 | 1.0 | GO:0060072 | large conductance calcium-activated potassium channel activity(GO:0060072) |
0.1 | 0.9 | GO:0015232 | heme transporter activity(GO:0015232) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.1 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 2.1 | ST MYOCYTE AD PATHWAY | Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway. |
0.0 | 2.1 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.0 | 1.9 | PID P38 ALPHA BETA DOWNSTREAM PATHWAY | Signaling mediated by p38-alpha and p38-beta |
0.0 | 1.7 | PID INTEGRIN CS PATHWAY | Integrin family cell surface interactions |
0.0 | 1.1 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 0.6 | PID NECTIN PATHWAY | Nectin adhesion pathway |
0.0 | 0.6 | ST DIFFERENTIATION PATHWAY IN PC12 CELLS | Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway. |
0.0 | 0.6 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 0.6 | PID PI3K PLC TRK PATHWAY | Trk receptor signaling mediated by PI3K and PLC-gamma |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.9 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.1 | 2.5 | REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES | Genes involved in Cytosolic sulfonation of small molecules |
0.0 | 1.7 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.0 | 1.5 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 1.2 | REACTOME FORMATION OF FIBRIN CLOT CLOTTING CASCADE | Genes involved in Formation of Fibrin Clot (Clotting Cascade) |
0.0 | 1.1 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.1 | 0.9 | REACTOME DIGESTION OF DIETARY CARBOHYDRATE | Genes involved in Digestion of dietary carbohydrate |
0.1 | 0.8 | REACTOME HORMONE LIGAND BINDING RECEPTORS | Genes involved in Hormone ligand-binding receptors |
0.0 | 0.8 | REACTOME G BETA GAMMA SIGNALLING THROUGH PLC BETA | Genes involved in G beta:gamma signalling through PLC beta |
0.0 | 0.7 | REACTOME ERK MAPK TARGETS | Genes involved in ERK/MAPK targets |