Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
GATA3 | hg38_v1_chr10_+_8054668_8054697 | 0.68 | 6.6e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_49474561 Show fit | 1.07 |
ENST00000594009.5
ENST00000595510.1 ENST00000595815.1 |
fms related receptor tyrosine kinase 3 ligand novel transcript |
|
chr3_-_121660892 Show fit | 1.03 |
ENST00000428394.6
ENST00000314583.8 |
hematopoietic cell-specific Lyn substrate 1 |
|
chr1_+_171090892 Show fit | 0.97 |
ENST00000367755.9
ENST00000479749.1 |
flavin containing dimethylaniline monoxygenase 3 |
|
chr3_+_45030130 Show fit | 0.92 |
ENST00000428034.1
|
C-type lectin domain family 3 member B |
|
chr19_-_42390268 Show fit | 0.84 |
ENST00000597255.1
ENST00000222032.10 |
cornifelin |
|
chr2_+_127419882 Show fit | 0.84 |
ENST00000409048.1
|
protein C, inactivator of coagulation factors Va and VIIIa |
|
chr15_-_93073706 Show fit | 0.82 |
ENST00000425933.6
|
repulsive guidance molecule BMP co-receptor a |
|
chr20_+_13008919 Show fit | 0.80 |
ENST00000399002.7
ENST00000434210.5 |
serine palmitoyltransferase long chain base subunit 3 |
|
chr9_+_87497222 Show fit | 0.77 |
ENST00000358077.9
|
death associated protein kinase 1 |
|
chr4_-_99352754 Show fit | 0.75 |
ENST00000639454.1
|
alcohol dehydrogenase 1B (class I), beta polypeptide |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.1 | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane(GO:0006614) |
0.0 | 2.8 | GO:0010972 | negative regulation of G2/M transition of mitotic cell cycle(GO:0010972) |
0.1 | 2.5 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.0 | 2.4 | GO:0070125 | mitochondrial translational elongation(GO:0070125) |
0.0 | 2.2 | GO:0000413 | protein peptidyl-prolyl isomerization(GO:0000413) |
0.1 | 2.0 | GO:0042994 | cytoplasmic sequestering of transcription factor(GO:0042994) |
0.1 | 1.8 | GO:0007021 | tubulin complex assembly(GO:0007021) |
0.1 | 1.7 | GO:1901748 | leukotriene D4 metabolic process(GO:1901748) leukotriene D4 biosynthetic process(GO:1901750) |
0.1 | 1.7 | GO:0097151 | positive regulation of inhibitory postsynaptic potential(GO:0097151) modulation of inhibitory postsynaptic potential(GO:0098828) |
0.2 | 1.6 | GO:0032020 | ISG15-protein conjugation(GO:0032020) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.6 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.2 | 2.9 | GO:0098647 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 2.9 | GO:0045271 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.1 | 2.2 | GO:0000421 | autophagosome membrane(GO:0000421) |
0.1 | 1.9 | GO:0097512 | cardiac myofibril(GO:0097512) |
0.0 | 1.8 | GO:0000315 | organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762) |
0.0 | 1.7 | GO:0005859 | muscle myosin complex(GO:0005859) |
0.0 | 1.7 | GO:0022626 | cytosolic ribosome(GO:0022626) |
0.1 | 1.6 | GO:0031083 | BLOC-1 complex(GO:0031083) |
0.0 | 1.4 | GO:0090575 | RNA polymerase II transcription factor complex(GO:0090575) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.8 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.0 | 3.0 | GO:0004860 | protein kinase inhibitor activity(GO:0004860) |
0.0 | 2.7 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.1 | 2.1 | GO:0005528 | macrolide binding(GO:0005527) FK506 binding(GO:0005528) |
0.1 | 1.9 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.1 | 1.7 | GO:0036374 | glutathione hydrolase activity(GO:0036374) |
0.3 | 1.5 | GO:0060961 | phospholipase D inhibitor activity(GO:0060961) |
0.1 | 1.5 | GO:1990459 | transferrin receptor binding(GO:1990459) |
0.0 | 1.5 | GO:0019003 | GDP binding(GO:0019003) |
0.0 | 1.4 | GO:0008093 | cytoskeletal adaptor activity(GO:0008093) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.0 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 2.6 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 2.5 | ST GA13 PATHWAY | G alpha 13 Pathway |
0.0 | 1.8 | PID CD8 TCR DOWNSTREAM PATHWAY | Downstream signaling in naïve CD8+ T cells |
0.0 | 1.5 | PID RHODOPSIN PATHWAY | Visual signal transduction: Rods |
0.0 | 1.5 | PID EPO PATHWAY | EPO signaling pathway |
0.0 | 1.5 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 1.4 | PID PDGFRB PATHWAY | PDGFR-beta signaling pathway |
0.0 | 1.2 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 1.1 | SA G1 AND S PHASES | Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.9 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.0 | 2.9 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.1 | 2.8 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.1 | 2.7 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 2.3 | REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING | Genes involved in Negative regulators of RIG-I/MDA5 signaling |
0.1 | 2.0 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
0.0 | 1.9 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.1 | 1.8 | REACTOME TETRAHYDROBIOPTERIN BH4 SYNTHESIS RECYCLING SALVAGE AND REGULATION | Genes involved in Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation |
0.0 | 1.8 | REACTOME REGULATION OF ORNITHINE DECARBOXYLASE ODC | Genes involved in Regulation of ornithine decarboxylase (ODC) |
0.0 | 1.7 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |