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Epithelial-Mesenchymal Transition, human (Scheel, 2011)

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Results for GAUAUGU

Z-value: 0.10

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miRNA associated with seed GAUAUGU

NamemiRBASE accession
hsa-miR-190a-5p
MIMAT0000458
hsa-miR-190b
MIMAT0004929

Activity profile of GAUAUGU motif

Sorted Z-values of GAUAUGU motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr18_-_28177102 0.09 ENST00000413878.2
ENST00000269141.8
CDH2
cadherin 2
chr11_-_70661762 0.07 ENST00000357171.7
ENST00000412252.5
ENST00000449833.6
ENST00000338508.8
SHANK2
SH3 and multiple ankyrin repeat domains 2
chr8_-_121641424 0.05 ENST00000303924.5
HAS2
hyaluronan synthase 2
chr12_-_31591129 0.05 ENST00000389082.10
DENND5B
DENN domain containing 5B
chr2_+_148021001 0.04 ENST00000407073.5
MBD5
methyl-CpG binding domain protein 5
chr8_-_23854796 0.04 ENST00000290271.7
STC1
stanniocalcin 1
chr20_-_49482645 0.04 ENST00000371741.6
KCNB1
potassium voltage-gated channel subfamily B member 1
chr15_-_45522747 0.03 ENST00000261867.5
SLC30A4
solute carrier family 30 member 4
chr14_+_54567612 0.03 ENST00000251091.9
ENST00000392067.7
ENST00000631086.2
SAMD4A
sterile alpha motif domain containing 4A
chr13_+_34942263 0.02 ENST00000379939.7
ENST00000400445.7
NBEA
neurobeachin
chr2_+_148644706 0.02 ENST00000258484.11
EPC2
enhancer of polycomb homolog 2
chr13_+_48975879 0.02 ENST00000492622.6
FNDC3A
fibronectin type III domain containing 3A
chr14_+_79279403 0.02 ENST00000281127.11
NRXN3
neurexin 3
chr2_-_181680490 0.02 ENST00000684145.1
ENST00000295108.4
ENST00000684079.1
ENST00000683430.1
CERKL
NEUROD1
ceramide kinase like
neuronal differentiation 1
chr13_-_102401599 0.02 ENST00000376131.8
FGF14
fibroblast growth factor 14
chr8_-_94949350 0.01 ENST00000448464.6
ENST00000342697.5
TP53INP1
tumor protein p53 inducible nuclear protein 1
chr12_+_27244222 0.01 ENST00000545470.5
ENST00000389032.8
ENST00000540996.5
STK38L
serine/threonine kinase 38 like
chr6_+_68635273 0.01 ENST00000370598.6
ADGRB3
adhesion G protein-coupled receptor B3
chr8_-_92103217 0.01 ENST00000615601.4
ENST00000523629.5
RUNX1T1
RUNX1 partner transcriptional co-repressor 1
chr16_+_24729641 0.01 ENST00000395799.8
TNRC6A
trinucleotide repeat containing adaptor 6A
chr3_+_11272413 0.01 ENST00000446450.6
ENST00000354956.9
ENST00000354449.7
ENST00000419112.5
ATG7
autophagy related 7
chr5_+_175796310 0.00 ENST00000359546.8
CPLX2
complexin 2
chr3_-_126357399 0.00 ENST00000296233.4
KLF15
Kruppel like factor 15
chr2_+_207529892 0.00 ENST00000432329.6
ENST00000445803.5
CREB1
cAMP responsive element binding protein 1
chr22_+_40177917 0.00 ENST00000454349.7
ENST00000335727.13
TNRC6B
trinucleotide repeat containing adaptor 6B
chr2_-_196592671 0.00 ENST00000260983.8
ENST00000644030.1
HECW2
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
chr8_+_63168597 0.00 ENST00000539294.6
ENST00000621957.4
ENST00000517371.5
ENST00000621413.4
ENST00000612880.4
YTHDF3
YTH N6-methyladenosine RNA binding protein 3
chr15_-_52529050 0.00 ENST00000399231.7
MYO5A
myosin VA
chr18_-_75209126 0.00 ENST00000322342.4
ZADH2
zinc binding alcohol dehydrogenase domain containing 2
chr7_+_5045821 0.00 ENST00000353796.7
ENST00000396912.2
ENST00000396904.2
RBAK
RBAK-RBAKDN
RB associated KRAB zinc finger
RBAK-RBAKDN readthrough
chr11_-_30016945 0.00 ENST00000328224.7
KCNA4
potassium voltage-gated channel subfamily A member 4
chr4_+_169620527 0.00 ENST00000360642.7
ENST00000512813.5
ENST00000513761.6
CLCN3
chloride voltage-gated channel 3
chr2_+_178194460 0.00 ENST00000392505.6
ENST00000359685.7
ENST00000357080.8
ENST00000190611.9
ENST00000409045.7
OSBPL6
oxysterol binding protein like 6
chr11_-_107018462 0.00 ENST00000526355.7
GUCY1A2
guanylate cyclase 1 soluble subunit alpha 2

Network of associatons between targets according to the STRING database.

First level regulatory network of GAUAUGU

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0045226 extracellular polysaccharide biosynthetic process(GO:0045226) extracellular polysaccharide metabolic process(GO:0046379)
0.0 0.1 GO:1902897 regulation of postsynaptic density protein 95 clustering(GO:1902897)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0050501 hyaluronan synthase activity(GO:0050501)