Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HNF4G | hg38_v1_chr8_+_75539862_75539892, hg38_v1_chr8_+_75539893_75539968 | 0.43 | 2.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr17_-_41521719 Show fit | 3.70 |
ENST00000393976.6
|
keratin 15 |
|
chr19_-_6720641 Show fit | 3.00 |
ENST00000245907.11
|
complement C3 |
|
chr12_-_52452139 Show fit | 2.81 |
ENST00000252252.4
|
keratin 6B |
|
chr1_-_201399525 Show fit | 2.05 |
ENST00000367313.4
|
ladinin 1 |
|
chr11_-_118264282 Show fit | 2.01 |
ENST00000278937.7
|
myelin protein zero like 2 |
|
chr8_-_56320098 Show fit | 1.99 |
ENST00000303749.8
ENST00000396721.6 |
short chain dehydrogenase/reductase family 16C member 5 |
|
chr18_+_36544544 Show fit | 1.99 |
ENST00000591635.5
|
formin homology 2 domain containing 3 |
|
chr12_-_52493250 Show fit | 1.96 |
ENST00000330722.7
|
keratin 6A |
|
chr20_+_59676661 Show fit | 1.93 |
ENST00000355648.8
|
phosphatase and actin regulator 3 |
|
chr12_-_94616061 Show fit | 1.89 |
ENST00000551457.1
|
transmembrane and coiled-coil domain family 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.8 | GO:0048791 | calcium ion-regulated exocytosis of neurotransmitter(GO:0048791) |
0.0 | 3.7 | GO:0070268 | cornification(GO:0070268) |
0.0 | 3.2 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
0.0 | 3.0 | GO:0003009 | skeletal muscle contraction(GO:0003009) |
1.0 | 2.9 | GO:0001796 | type IIa hypersensitivity(GO:0001794) regulation of type IIa hypersensitivity(GO:0001796) type II hypersensitivity(GO:0002445) regulation of type II hypersensitivity(GO:0002892) |
0.1 | 2.8 | GO:0007398 | ectoderm development(GO:0007398) |
0.6 | 2.6 | GO:0034224 | cellular response to zinc ion starvation(GO:0034224) |
0.8 | 2.4 | GO:0002415 | immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor(GO:0002415) |
0.1 | 2.1 | GO:0038203 | TORC2 signaling(GO:0038203) |
0.1 | 2.1 | GO:0042574 | retinal metabolic process(GO:0042574) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.8 | GO:0045095 | keratin filament(GO:0045095) |
0.1 | 4.7 | GO:0055038 | recycling endosome membrane(GO:0055038) |
0.0 | 4.4 | GO:0005604 | basement membrane(GO:0005604) |
0.0 | 3.6 | GO:0005882 | intermediate filament(GO:0005882) |
0.2 | 3.5 | GO:0005861 | troponin complex(GO:0005861) |
0.0 | 3.0 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.1 | 2.1 | GO:0031932 | TORC2 complex(GO:0031932) |
0.0 | 2.1 | GO:0016363 | nuclear matrix(GO:0016363) |
0.1 | 2.0 | GO:0005865 | striated muscle thin filament(GO:0005865) |
0.0 | 1.9 | GO:0005796 | Golgi lumen(GO:0005796) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.6 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.0 | 6.8 | GO:0004866 | endopeptidase inhibitor activity(GO:0004866) |
0.0 | 5.7 | GO:0005125 | cytokine activity(GO:0005125) |
0.1 | 3.4 | GO:0005385 | zinc ion transmembrane transporter activity(GO:0005385) |
0.2 | 3.3 | GO:0031014 | troponin T binding(GO:0031014) |
0.0 | 2.8 | GO:0005544 | calcium-dependent phospholipid binding(GO:0005544) |
0.1 | 2.3 | GO:0098641 | cadherin binding involved in cell-cell adhesion(GO:0098641) |
0.0 | 2.2 | GO:0019003 | GDP binding(GO:0019003) |
0.1 | 2.1 | GO:0004745 | retinol dehydrogenase activity(GO:0004745) |
0.0 | 1.9 | GO:0008157 | protein phosphatase 1 binding(GO:0008157) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.7 | PID ERB GENOMIC PATHWAY | Validated nuclear estrogen receptor beta network |
0.0 | 3.5 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 3.0 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.0 | 3.0 | PID MTOR 4PATHWAY | mTOR signaling pathway |
0.0 | 1.9 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 1.9 | PID BCR 5PATHWAY | BCR signaling pathway |
0.0 | 1.5 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 1.2 | PID BMP PATHWAY | BMP receptor signaling |
0.0 | 1.1 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.0 | 1.1 | PID ECADHERIN STABILIZATION PATHWAY | Stabilization and expansion of the E-cadherin adherens junction |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.5 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 3.4 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
0.1 | 3.1 | REACTOME INITIAL TRIGGERING OF COMPLEMENT | Genes involved in Initial triggering of complement |
0.0 | 3.0 | REACTOME IL1 SIGNALING | Genes involved in Interleukin-1 signaling |
0.0 | 1.8 | REACTOME SIGNALING BY BMP | Genes involved in Signaling by BMP |
0.1 | 1.7 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.0 | 1.5 | REACTOME SIGNALING BY CONSTITUTIVELY ACTIVE EGFR | Genes involved in Signaling by constitutively active EGFR |
0.0 | 1.4 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.0 | 1.3 | REACTOME CELL JUNCTION ORGANIZATION | Genes involved in Cell junction organization |
0.1 | 1.2 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |