Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HOXA1 | hg38_v1_chr7_-_27095972_27096039 | 0.84 | 9.8e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_-_10587219 Show fit | 3.91 |
ENST00000591240.5
ENST00000589684.5 ENST00000591676.1 ENST00000250244.11 ENST00000590923.5 |
adaptor related protein complex 1 subunit mu 2 |
|
chr16_+_71626149 Show fit | 1.60 |
ENST00000567566.1
|
MARVEL domain containing 3 |
|
chr8_+_94641074 Show fit | 1.57 |
ENST00000423620.6
|
epithelial splicing regulatory protein 1 |
|
chr1_+_2073986 Show fit | 1.21 |
ENST00000461106.6
|
protein kinase C zeta |
|
chr16_+_71626175 Show fit | 1.17 |
ENST00000268485.8
ENST00000565261.1 ENST00000299952.4 |
MARVEL domain containing 3 |
|
chr5_+_167754918 Show fit | 1.15 |
ENST00000519204.5
|
teneurin transmembrane protein 2 |
|
chr12_-_95116967 Show fit | 1.03 |
ENST00000551521.5
|
FYVE, RhoGEF and PH domain containing 6 |
|
chr20_+_59628609 Show fit | 0.90 |
ENST00000541461.5
|
phosphatase and actin regulator 3 |
|
chr1_+_183186238 Show fit | 0.87 |
ENST00000493293.5
ENST00000264144.5 |
laminin subunit gamma 2 |
|
chr1_-_201399525 Show fit | 0.85 |
ENST00000367313.4
|
ladinin 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.9 | GO:0050690 | regulation of defense response to virus by virus(GO:0050690) |
0.2 | 2.8 | GO:1902414 | protein localization to cell junction(GO:1902414) |
0.0 | 1.3 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
0.2 | 1.2 | GO:2001181 | positive regulation of interleukin-10 secretion(GO:2001181) |
0.1 | 1.2 | GO:0097264 | self proteolysis(GO:0097264) |
0.1 | 0.9 | GO:0035524 | proline transmembrane transport(GO:0035524) |
0.0 | 0.8 | GO:0050716 | positive regulation of interleukin-1 secretion(GO:0050716) |
0.1 | 0.7 | GO:0033159 | negative regulation of protein import into nucleus, translocation(GO:0033159) |
0.1 | 0.6 | GO:1904021 | negative regulation of G-protein coupled receptor internalization(GO:1904021) |
0.2 | 0.5 | GO:0090038 | negative regulation of protein kinase C signaling(GO:0090038) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.9 | GO:0030131 | clathrin adaptor complex(GO:0030131) |
0.0 | 2.7 | GO:0005923 | bicellular tight junction(GO:0005923) |
0.1 | 1.2 | GO:0043203 | axon hillock(GO:0043203) |
0.1 | 0.9 | GO:0043256 | laminin complex(GO:0043256) |
0.0 | 0.9 | GO:0071682 | endocytic vesicle lumen(GO:0071682) |
0.1 | 0.4 | GO:0034686 | integrin alphav-beta8 complex(GO:0034686) |
0.0 | 0.3 | GO:0005916 | fascia adherens(GO:0005916) |
0.0 | 0.3 | GO:1990909 | Wnt signalosome(GO:1990909) |
0.1 | 0.2 | GO:1990032 | parallel fiber(GO:1990032) |
0.0 | 0.2 | GO:0005850 | eukaryotic translation initiation factor 2 complex(GO:0005850) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.0 | GO:0031435 | mitogen-activated protein kinase kinase kinase binding(GO:0031435) |
0.1 | 1.2 | GO:0043560 | insulin receptor substrate binding(GO:0043560) |
0.1 | 1.1 | GO:0017034 | Rap guanyl-nucleotide exchange factor activity(GO:0017034) |
0.1 | 0.9 | GO:0005298 | proline:sodium symporter activity(GO:0005298) |
0.0 | 0.8 | GO:0042056 | chemoattractant activity(GO:0042056) |
0.0 | 0.8 | GO:0008157 | protein phosphatase 1 binding(GO:0008157) |
0.1 | 0.7 | GO:0030911 | cGMP-stimulated cyclic-nucleotide phosphodiesterase activity(GO:0004118) TPR domain binding(GO:0030911) |
0.2 | 0.6 | GO:0031687 | A2A adenosine receptor binding(GO:0031687) |
0.1 | 0.6 | GO:0005499 | vitamin D binding(GO:0005499) |
0.1 | 0.4 | GO:1990430 | extracellular matrix protein binding(GO:1990430) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.2 | PID INSULIN GLUCOSE PATHWAY | Insulin-mediated glucose transport |
0.0 | 0.9 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 0.9 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.0 | 0.5 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
0.0 | 0.4 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.0 | 0.3 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.9 | REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION | Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression |
0.1 | 1.2 | REACTOME TGF BETA RECEPTOR SIGNALING IN EMT EPITHELIAL TO MESENCHYMAL TRANSITION | Genes involved in TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition) |
0.0 | 1.0 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |
0.0 | 0.9 | REACTOME NA CL DEPENDENT NEUROTRANSMITTER TRANSPORTERS | Genes involved in Na+/Cl- dependent neurotransmitter transporters |
0.0 | 0.8 | REACTOME ADVANCED GLYCOSYLATION ENDPRODUCT RECEPTOR SIGNALING | Genes involved in Advanced glycosylation endproduct receptor signaling |
0.0 | 0.4 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |
0.0 | 0.3 | REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE | Genes involved in Reversible Hydration of Carbon Dioxide |
0.0 | 0.3 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.0 | 0.2 | REACTOME RAF MAP KINASE CASCADE | Genes involved in RAF/MAP kinase cascade |
0.0 | 0.2 | REACTOME HORMONE LIGAND BINDING RECEPTORS | Genes involved in Hormone ligand-binding receptors |