Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HOXD3 | hg38_v1_chr2_+_176157293_176157332 | -0.41 | 3.2e-01 | Click! |
HOXB2 | hg38_v1_chr17_-_48545077_48545117 | 0.35 | 4.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_-_70553638 Show fit | 1.07 |
ENST00000444975.5
ENST00000445399.5 ENST00000295400.11 ENST00000418333.6 |
transforming growth factor alpha |
|
chr18_+_31447732 Show fit | 0.89 |
ENST00000257189.5
|
desmoglein 3 |
|
chr9_+_12693327 Show fit | 0.88 |
ENST00000388918.10
|
tyrosinase related protein 1 |
|
chr8_-_42377227 Show fit | 0.74 |
ENST00000220812.3
|
dickkopf WNT signaling pathway inhibitor 4 |
|
chr4_+_40196907 Show fit | 0.73 |
ENST00000622175.4
ENST00000619474.4 ENST00000615083.4 ENST00000610353.4 ENST00000614836.1 |
ras homolog family member H |
|
chr3_-_151316795 Show fit | 0.69 |
ENST00000260843.5
|
G protein-coupled receptor 87 |
|
chr4_+_40197023 Show fit | 0.67 |
ENST00000381799.10
|
ras homolog family member H |
|
chr1_-_242449478 Show fit | 0.66 |
ENST00000427495.5
|
phospholipase D family member 5 |
|
chr17_-_41118369 Show fit | 0.59 |
ENST00000391413.4
|
keratin associated protein 4-11 |
|
chr12_+_107318395 Show fit | 0.58 |
ENST00000420571.6
ENST00000280758.10 |
BTB domain containing 11 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.0 | GO:0050911 | detection of chemical stimulus involved in sensory perception of smell(GO:0050911) |
0.1 | 1.7 | GO:0045741 | positive regulation of epidermal growth factor-activated receptor activity(GO:0045741) |
0.0 | 1.5 | GO:0070268 | cornification(GO:0070268) |
0.0 | 1.3 | GO:0034260 | negative regulation of GTPase activity(GO:0034260) |
0.1 | 0.8 | GO:1900378 | positive regulation of melanin biosynthetic process(GO:0048023) positive regulation of secondary metabolite biosynthetic process(GO:1900378) |
0.0 | 0.8 | GO:0002076 | osteoblast development(GO:0002076) |
0.1 | 0.7 | GO:0051799 | negative regulation of hair follicle development(GO:0051799) |
0.0 | 0.7 | GO:0035589 | G-protein coupled purinergic nucleotide receptor signaling pathway(GO:0035589) |
0.1 | 0.5 | GO:0032913 | B cell receptor transport within lipid bilayer(GO:0032595) B cell receptor transport into membrane raft(GO:0032597) protein transport out of membrane raft(GO:0032599) chemokine receptor transport out of membrane raft(GO:0032600) negative regulation of transforming growth factor beta3 production(GO:0032913) chemokine receptor transport within lipid bilayer(GO:0033606) |
0.1 | 0.5 | GO:2000620 | innate vocalization behavior(GO:0098582) positive regulation of histone H4-K16 acetylation(GO:2000620) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.5 | GO:0012507 | ER to Golgi transport vesicle membrane(GO:0012507) |
0.0 | 1.3 | GO:0001772 | immunological synapse(GO:0001772) |
0.0 | 1.2 | GO:0030057 | desmosome(GO:0030057) |
0.0 | 0.9 | GO:0045095 | keratin filament(GO:0045095) |
0.0 | 0.6 | GO:0045009 | melanosome membrane(GO:0033162) chitosome(GO:0045009) |
0.0 | 0.5 | GO:0031362 | anchored component of external side of plasma membrane(GO:0031362) |
0.0 | 0.5 | GO:0005666 | DNA-directed RNA polymerase III complex(GO:0005666) |
0.0 | 0.5 | GO:0031258 | lamellipodium membrane(GO:0031258) |
0.1 | 0.4 | GO:0060187 | cell pole(GO:0060187) |
0.0 | 0.4 | GO:0035692 | macrophage migration inhibitory factor receptor complex(GO:0035692) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.7 | GO:0005154 | epidermal growth factor receptor binding(GO:0005154) |
0.1 | 1.4 | GO:0005549 | odorant binding(GO:0005549) |
0.0 | 1.2 | GO:0005095 | GTPase inhibitor activity(GO:0005095) |
0.1 | 0.8 | GO:0017034 | Rap guanyl-nucleotide exchange factor activity(GO:0017034) |
0.0 | 0.8 | GO:0034237 | protein kinase A regulatory subunit binding(GO:0034237) |
0.0 | 0.7 | GO:0001608 | G-protein coupled nucleotide receptor activity(GO:0001608) G-protein coupled purinergic nucleotide receptor activity(GO:0045028) |
0.0 | 0.7 | GO:0051428 | peptide hormone receptor binding(GO:0051428) |
0.0 | 0.7 | GO:0003899 | DNA-directed RNA polymerase activity(GO:0003899) |
0.0 | 0.6 | GO:0030296 | protein tyrosine kinase activator activity(GO:0030296) |
0.0 | 0.5 | GO:0015501 | glutamate:sodium symporter activity(GO:0015501) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.8 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 1.0 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
0.0 | 0.7 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 0.2 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 0.1 | ST IL 13 PATHWAY | Interleukin 13 (IL-13) Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.8 | REACTOME OLFACTORY SIGNALING PATHWAY | Genes involved in Olfactory Signaling Pathway |
0.0 | 1.3 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.0 | 1.0 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |
0.0 | 0.5 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |
0.0 | 0.5 | REACTOME HYALURONAN METABOLISM | Genes involved in Hyaluronan metabolism |
0.0 | 0.5 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
0.0 | 0.4 | REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE | Genes involved in Reversible Hydration of Carbon Dioxide |
0.0 | 0.4 | REACTOME MITOCHONDRIAL TRNA AMINOACYLATION | Genes involved in Mitochondrial tRNA aminoacylation |
0.0 | 0.4 | REACTOME SYNTHESIS OF PIPS AT THE EARLY ENDOSOME MEMBRANE | Genes involved in Synthesis of PIPs at the early endosome membrane |
0.0 | 0.2 | REACTOME ENDOSOMAL VACUOLAR PATHWAY | Genes involved in Endosomal/Vacuolar pathway |