Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
PRRX2 | hg38_v1_chr9_+_129665603_129665672 | -0.75 | 3.2e-02 | Click! |
HOXB6 | hg38_v1_chr17_-_48604959_48605000 | -0.17 | 6.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_91946989 Show fit | 6.25 |
ENST00000556154.5
|
fibulin 5 |
|
chr12_-_91182652 Show fit | 5.38 |
ENST00000552145.5
ENST00000546745.5 |
decorin |
|
chr14_-_91947383 Show fit | 5.28 |
ENST00000267620.14
|
fibulin 5 |
|
chr12_-_91182784 Show fit | 5.08 |
ENST00000547568.6
ENST00000052754.10 ENST00000552962.5 |
decorin |
|
chr2_-_144431001 Show fit | 4.71 |
ENST00000636413.1
|
zinc finger E-box binding homeobox 2 |
|
chr2_-_144430934 Show fit | 4.27 |
ENST00000638087.1
ENST00000638007.1 |
zinc finger E-box binding homeobox 2 |
|
chr9_-_92424427 Show fit | 3.44 |
ENST00000375550.5
|
osteomodulin |
|
chr3_+_141386862 Show fit | 2.74 |
ENST00000513258.5
|
zinc finger and BTB domain containing 38 |
|
chr2_-_144520106 Show fit | 2.48 |
ENST00000627532.3
ENST00000539609.7 |
zinc finger E-box binding homeobox 2 |
|
chr5_-_124746630 Show fit | 2.45 |
ENST00000513986.2
|
zinc finger protein 608 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 16.3 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
2.0 | 15.7 | GO:1902748 | positive regulation of lens fiber cell differentiation(GO:1902748) |
1.1 | 13.8 | GO:0048251 | elastic fiber assembly(GO:0048251) |
0.0 | 5.6 | GO:0007286 | spermatid development(GO:0007286) |
0.0 | 4.5 | GO:0001578 | microtubule bundle formation(GO:0001578) |
0.2 | 4.3 | GO:0048935 | peripheral nervous system neuron differentiation(GO:0048934) peripheral nervous system neuron development(GO:0048935) |
0.1 | 4.2 | GO:0030318 | melanocyte differentiation(GO:0030318) |
0.3 | 4.1 | GO:0034465 | response to carbon monoxide(GO:0034465) |
0.0 | 4.0 | GO:0006275 | regulation of DNA replication(GO:0006275) |
0.2 | 3.7 | GO:0042340 | keratan sulfate catabolic process(GO:0042340) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 16.5 | GO:0005589 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 14.5 | GO:0005730 | nucleolus(GO:0005730) |
1.5 | 13.9 | GO:0071953 | elastic fiber(GO:0071953) |
0.1 | 9.9 | GO:0005796 | Golgi lumen(GO:0005796) |
0.2 | 5.9 | GO:0071564 | npBAF complex(GO:0071564) |
0.0 | 5.8 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 5.0 | GO:0000151 | ubiquitin ligase complex(GO:0000151) |
0.0 | 5.0 | GO:0016607 | nuclear speck(GO:0016607) |
0.8 | 4.8 | GO:0097442 | CA3 pyramidal cell dendrite(GO:0097442) |
0.0 | 4.2 | GO:0044853 | plasma membrane raft(GO:0044853) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 18.1 | GO:0001205 | transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001205) |
0.2 | 16.2 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.0 | 9.9 | GO:0001227 | transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227) |
0.1 | 8.5 | GO:0001105 | RNA polymerase II transcription coactivator activity(GO:0001105) |
0.2 | 6.7 | GO:0008327 | methyl-CpG binding(GO:0008327) |
0.4 | 4.1 | GO:0060072 | large conductance calcium-activated potassium channel activity(GO:0060072) |
0.1 | 4.1 | GO:0005540 | hyaluronic acid binding(GO:0005540) |
0.0 | 3.6 | GO:0005178 | integrin binding(GO:0005178) |
0.6 | 3.2 | GO:0050436 | microfibril binding(GO:0050436) |
0.0 | 3.0 | GO:0004386 | helicase activity(GO:0004386) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 25.5 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.1 | 18.7 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 7.6 | PID P38 ALPHA BETA DOWNSTREAM PATHWAY | Signaling mediated by p38-alpha and p38-beta |
0.1 | 6.4 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.1 | 5.3 | PID LKB1 PATHWAY | LKB1 signaling events |
0.1 | 4.5 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 3.1 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 2.8 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.0 | 2.4 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.0 | 2.4 | PID SHP2 PATHWAY | SHP2 signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 20.2 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 4.0 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.2 | 3.9 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
0.0 | 3.8 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.3 | 3.7 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.0 | 3.7 | REACTOME CIRCADIAN CLOCK | Genes involved in Circadian Clock |
0.1 | 3.1 | REACTOME TIE2 SIGNALING | Genes involved in Tie2 Signaling |
0.1 | 1.9 | REACTOME HORMONE LIGAND BINDING RECEPTORS | Genes involved in Hormone ligand-binding receptors |
0.0 | 1.8 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.1 | 1.3 | REACTOME DIGESTION OF DIETARY CARBOHYDRATE | Genes involved in Digestion of dietary carbohydrate |