Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HOXC8 | hg38_v1_chr12_+_54008961_54009005 | 0.01 | 9.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr18_+_63777773 Show fit | 1.50 |
ENST00000447428.5
ENST00000546027.5 |
serpin family B member 7 |
|
chr5_+_140834230 Show fit | 1.38 |
ENST00000356878.5
ENST00000525929.2 |
protocadherin alpha 7 |
|
chr20_+_59628609 Show fit | 1.37 |
ENST00000541461.5
|
phosphatase and actin regulator 3 |
|
chr11_+_18132565 Show fit | 1.28 |
ENST00000621697.2
|
MAS related GPR family member X3 |
|
chr2_-_160200289 Show fit | 1.19 |
ENST00000409872.1
|
integrin subunit beta 6 |
|
chr2_-_160200251 Show fit | 1.19 |
ENST00000428609.6
ENST00000409967.6 ENST00000283249.7 |
integrin subunit beta 6 |
|
chr2_-_160200310 Show fit | 1.15 |
ENST00000620391.4
|
integrin subunit beta 6 |
|
chr1_-_153615858 Show fit | 1.14 |
ENST00000476873.5
|
S100 calcium binding protein A14 |
|
chr7_+_70596078 Show fit | 1.06 |
ENST00000644506.1
|
activator of transcription and developmental regulator AUTS2 |
|
chr10_+_46375619 Show fit | 0.99 |
ENST00000584982.7
ENST00000613703.4 |
annexin A8 like 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 3.5 | GO:0038044 | transforming growth factor-beta secretion(GO:0038044) |
0.0 | 2.9 | GO:0050911 | detection of chemical stimulus involved in sensory perception of smell(GO:0050911) |
0.0 | 2.1 | GO:0070268 | cornification(GO:0070268) |
0.1 | 2.0 | GO:0090026 | positive regulation of monocyte chemotaxis(GO:0090026) |
0.1 | 1.9 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
0.3 | 1.5 | GO:0090362 | positive regulation of platelet-derived growth factor production(GO:0090362) |
0.0 | 1.5 | GO:0060333 | interferon-gamma-mediated signaling pathway(GO:0060333) |
0.1 | 1.3 | GO:0015820 | leucine transport(GO:0015820) |
0.0 | 1.3 | GO:0006359 | regulation of transcription from RNA polymerase III promoter(GO:0006359) |
0.1 | 1.2 | GO:1900625 | regulation of monocyte aggregation(GO:1900623) positive regulation of monocyte aggregation(GO:1900625) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 3.5 | GO:0034685 | integrin alphav-beta6 complex(GO:0034685) |
0.3 | 1.9 | GO:0005610 | laminin-5 complex(GO:0005610) |
0.0 | 1.6 | GO:0001533 | cornified envelope(GO:0001533) |
0.0 | 1.3 | GO:0005666 | DNA-directed RNA polymerase III complex(GO:0005666) |
0.1 | 1.2 | GO:0035692 | macrophage migration inhibitory factor receptor complex(GO:0035692) |
0.0 | 0.9 | GO:0031095 | platelet dense tubular network membrane(GO:0031095) |
0.0 | 0.9 | GO:0071682 | endocytic vesicle lumen(GO:0071682) |
0.0 | 0.8 | GO:0071439 | clathrin complex(GO:0071439) |
0.0 | 0.8 | GO:0032982 | myosin filament(GO:0032982) |
0.0 | 0.8 | GO:0016327 | apicolateral plasma membrane(GO:0016327) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.5 | GO:0001618 | virus receptor activity(GO:0001618) |
0.0 | 2.9 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.0 | 2.4 | GO:0004864 | protein phosphatase inhibitor activity(GO:0004864) |
0.0 | 2.4 | GO:0005544 | calcium-dependent phospholipid binding(GO:0005544) |
0.1 | 2.2 | GO:0005549 | odorant binding(GO:0005549) |
0.0 | 1.8 | GO:0042379 | chemokine receptor binding(GO:0042379) |
0.1 | 1.7 | GO:0001730 | 2'-5'-oligoadenylate synthetase activity(GO:0001730) |
0.0 | 1.5 | GO:0005540 | hyaluronic acid binding(GO:0005540) |
0.0 | 1.3 | GO:0003899 | DNA-directed RNA polymerase activity(GO:0003899) |
0.2 | 1.1 | GO:0005298 | proline:sodium symporter activity(GO:0005298) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.2 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.1 | 1.9 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 1.7 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.0 | 1.3 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 1.2 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
0.0 | 1.0 | PID GMCSF PATHWAY | GMCSF-mediated signaling events |
0.0 | 0.9 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 0.8 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.0 | 0.8 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
0.0 | 0.7 | PID S1P S1P1 PATHWAY | S1P1 pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.6 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.0 | 2.2 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.0 | 2.2 | REACTOME CELL JUNCTION ORGANIZATION | Genes involved in Cell junction organization |
0.0 | 1.9 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.0 | 1.9 | REACTOME OLFACTORY SIGNALING PATHWAY | Genes involved in Olfactory Signaling Pathway |
0.1 | 1.1 | REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE | Genes involved in Reversible Hydration of Carbon Dioxide |
0.0 | 1.0 | REACTOME HYALURONAN UPTAKE AND DEGRADATION | Genes involved in Hyaluronan uptake and degradation |
0.0 | 1.0 | REACTOME ADVANCED GLYCOSYLATION ENDPRODUCT RECEPTOR SIGNALING | Genes involved in Advanced glycosylation endproduct receptor signaling |
0.0 | 0.8 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.0 | 0.6 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |