Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
IKZF1 | hg38_v1_chr7_+_50308672_50308769 | 0.88 | 4.2e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_-_50953063 Show fit | 3.38 |
ENST00000391809.6
|
kallikrein related peptidase 5 |
|
chr19_-_50953093 Show fit | 3.32 |
ENST00000593428.5
|
kallikrein related peptidase 5 |
|
chr19_-_35513641 Show fit | 3.13 |
ENST00000339686.8
ENST00000447113.6 |
dermokine |
|
chr1_+_34782259 Show fit | 2.99 |
ENST00000373362.3
|
gap junction protein beta 3 |
|
chr19_-_50952942 Show fit | 2.95 |
ENST00000594846.1
ENST00000336334.8 |
kallikrein related peptidase 5 |
|
chr8_+_94641145 Show fit | 2.90 |
ENST00000433389.8
ENST00000358397.9 |
epithelial splicing regulatory protein 1 |
|
chr1_-_153616289 Show fit | 2.88 |
ENST00000368701.5
ENST00000344616.4 |
S100 calcium binding protein A14 |
|
chr12_-_52452139 Show fit | 2.60 |
ENST00000252252.4
|
keratin 6B |
|
chr16_+_68645290 Show fit | 2.50 |
ENST00000264012.9
|
cadherin 3 |
|
chr12_-_8662073 Show fit | 2.49 |
ENST00000535411.5
ENST00000540087.5 |
microfibril associated protein 5 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 14.1 | GO:0070268 | cornification(GO:0070268) |
1.9 | 11.6 | GO:0002803 | positive regulation of antimicrobial peptide production(GO:0002225) positive regulation of antibacterial peptide production(GO:0002803) |
0.3 | 9.3 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
1.0 | 8.7 | GO:0031444 | slow-twitch skeletal muscle fiber contraction(GO:0031444) |
0.0 | 6.9 | GO:0043484 | regulation of RNA splicing(GO:0043484) |
1.6 | 6.3 | GO:0042361 | menaquinone catabolic process(GO:0042361) vitamin K catabolic process(GO:0042377) |
0.1 | 5.8 | GO:2000649 | regulation of sodium ion transmembrane transporter activity(GO:2000649) |
0.1 | 5.6 | GO:0060216 | definitive hemopoiesis(GO:0060216) |
1.3 | 5.1 | GO:1903575 | cornified envelope assembly(GO:1903575) |
0.2 | 4.7 | GO:0035590 | purinergic nucleotide receptor signaling pathway(GO:0035590) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 11.6 | GO:0005861 | troponin complex(GO:0005861) |
1.6 | 11.5 | GO:0097209 | epidermal lamellar body(GO:0097209) |
0.2 | 10.1 | GO:0001533 | cornified envelope(GO:0001533) |
0.1 | 8.5 | GO:0045095 | keratin filament(GO:0045095) |
0.2 | 8.1 | GO:0016327 | apicolateral plasma membrane(GO:0016327) |
0.1 | 7.0 | GO:0070821 | tertiary granule membrane(GO:0070821) |
0.2 | 6.3 | GO:0005922 | connexon complex(GO:0005922) |
0.0 | 5.9 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.1 | 5.4 | GO:0046658 | anchored component of plasma membrane(GO:0046658) |
0.8 | 5.3 | GO:0005610 | laminin-5 complex(GO:0005610) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 23.2 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.8 | 11.2 | GO:0031014 | troponin T binding(GO:0031014) |
0.1 | 9.9 | GO:0017080 | sodium channel regulator activity(GO:0017080) |
0.1 | 7.9 | GO:0004864 | protein phosphatase inhibitor activity(GO:0004864) |
0.2 | 7.7 | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709) |
0.1 | 7.2 | GO:0005544 | calcium-dependent phospholipid binding(GO:0005544) |
0.0 | 6.2 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.2 | 6.0 | GO:0098641 | cadherin binding involved in cell-cell adhesion(GO:0098641) |
0.1 | 5.6 | GO:0019894 | kinesin binding(GO:0019894) |
0.0 | 5.0 | GO:0005125 | cytokine activity(GO:0005125) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.5 | PID NOTCH PATHWAY | Notch signaling pathway |
0.4 | 7.3 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.2 | 7.0 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.1 | 5.8 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
0.1 | 4.4 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.0 | 3.8 | PID P73PATHWAY | p73 transcription factor network |
0.1 | 3.6 | SA B CELL RECEPTOR COMPLEXES | Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases. |
0.0 | 3.3 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 3.2 | SIG CHEMOTAXIS | Genes related to chemotaxis |
0.0 | 3.2 | PID FGF PATHWAY | FGF signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.3 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.1 | 9.0 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.1 | 8.9 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.3 | 6.2 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.1 | 6.2 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |
0.1 | 5.7 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.1 | 5.3 | REACTOME CELL JUNCTION ORGANIZATION | Genes involved in Cell junction organization |
0.0 | 5.1 | REACTOME L1CAM INTERACTIONS | Genes involved in L1CAM interactions |
0.1 | 4.8 | REACTOME KINESINS | Genes involved in Kinesins |
0.2 | 4.4 | REACTOME ACTIVATION OF RAC | Genes involved in Activation of Rac |