Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSG00000168310.11 | interferon regulatory factor 2 | |
ENSG00000170581.14 | signal transducer and activator of transcription 2 | |
ENSG00000140968.11 | interferon regulatory factor 8 | |
ENSG00000125347.15 | interferon regulatory factor 1 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
STAT2 | hg38_v1_chr12_-_56360084_56360146 | 0.95 | 2.9e-04 | Click! |
IRF1 | hg38_v1_chr5_-_132490750_132490840 | 0.71 | 4.8e-02 | Click! |
IRF8 | hg38_v1_chr16_+_85908988_85909033 | -0.58 | 1.3e-01 | Click! |
IRF2 | hg38_v1_chr4_-_184474518_184474556 | 0.31 | 4.6e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.2 | GO:0006521 | regulation of cellular amino acid metabolic process(GO:0006521) |
0.8 | 8.0 | GO:0032020 | ISG15-protein conjugation(GO:0032020) |
0.2 | 7.3 | GO:0035456 | response to interferon-beta(GO:0035456) |
0.1 | 6.0 | GO:0032728 | positive regulation of interferon-beta production(GO:0032728) |
0.4 | 5.8 | GO:0035457 | cellular response to interferon-alpha(GO:0035457) |
0.5 | 5.4 | GO:1990504 | dense core granule exocytosis(GO:1990504) |
0.4 | 4.6 | GO:0002158 | osteoclast proliferation(GO:0002158) |
0.3 | 4.6 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.4 | 4.1 | GO:1903943 | regulation of hepatocyte apoptotic process(GO:1903943) negative regulation of hepatocyte apoptotic process(GO:1903944) |
0.4 | 3.9 | GO:0070212 | protein poly-ADP-ribosylation(GO:0070212) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 8.1 | GO:1990111 | spermatoproteasome complex(GO:1990111) |
0.0 | 6.0 | GO:0042734 | presynaptic membrane(GO:0042734) |
0.4 | 4.6 | GO:0098647 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.2 | 4.1 | GO:0031265 | CD95 death-inducing signaling complex(GO:0031265) |
0.2 | 2.8 | GO:0000813 | ESCRT I complex(GO:0000813) |
0.0 | 2.7 | GO:0015030 | Cajal body(GO:0015030) |
0.5 | 2.5 | GO:0072558 | NLRP1 inflammasome complex(GO:0072558) |
0.1 | 2.3 | GO:0005614 | interstitial matrix(GO:0005614) |
0.0 | 2.3 | GO:0043657 | host(GO:0018995) host cell(GO:0043657) |
0.0 | 2.2 | GO:0005796 | Golgi lumen(GO:0005796) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 14.3 | GO:0005525 | GTP binding(GO:0005525) |
0.3 | 8.2 | GO:0004298 | threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003) |
0.2 | 7.1 | GO:0097200 | cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:0097200) |
0.0 | 6.1 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.0 | 5.6 | GO:0005518 | collagen binding(GO:0005518) |
0.0 | 5.5 | GO:0003714 | transcription corepressor activity(GO:0003714) |
0.3 | 3.9 | GO:0031386 | protein tag(GO:0031386) |
0.0 | 3.7 | GO:0017137 | Rab GTPase binding(GO:0017137) |
0.7 | 3.6 | GO:0016941 | natriuretic peptide receptor activity(GO:0016941) |
0.1 | 3.5 | GO:0070403 | NAD+ binding(GO:0070403) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.7 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 5.5 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 3.9 | SA FAS SIGNALING | The TNF-type receptor Fas induces apoptosis on ligand binding. |
0.2 | 3.0 | ST TYPE I INTERFERON PATHWAY | Type I Interferon (alpha/beta IFN) Pathway |
0.1 | 2.3 | PID S1P S1P3 PATHWAY | S1P3 pathway |
0.0 | 1.9 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 1.8 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 1.8 | PID CD8 TCR DOWNSTREAM PATHWAY | Downstream signaling in naïve CD8+ T cells |
0.1 | 1.7 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.0 | 1.7 | PID INTEGRIN1 PATHWAY | Beta1 integrin cell surface interactions |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 21.0 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.1 | 9.0 | REACTOME VIF MEDIATED DEGRADATION OF APOBEC3G | Genes involved in Vif-mediated degradation of APOBEC3G |
0.1 | 6.5 | REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING | Genes involved in Negative regulators of RIG-I/MDA5 signaling |
0.2 | 4.6 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.1 | 3.2 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |
0.1 | 2.1 | REACTOME NOD1 2 SIGNALING PATHWAY | Genes involved in NOD1/2 Signaling Pathway |
0.1 | 2.0 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
0.1 | 1.9 | REACTOME EXTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Extrinsic Pathway for Apoptosis |
0.1 | 1.8 | REACTOME IKK COMPLEX RECRUITMENT MEDIATED BY RIP1 | Genes involved in IKK complex recruitment mediated by RIP1 |
0.0 | 1.7 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |