Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
IRF7 | hg38_v1_chr11_-_615921_615970, hg38_v1_chr11_-_615570_615728 | 0.54 | 1.7e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_91180365 Show fit | 4.38 |
ENST00000547937.5
|
decorin |
|
chr9_-_92424427 Show fit | 3.29 |
ENST00000375550.5
|
osteomodulin |
|
chr4_-_137532452 Show fit | 3.03 |
ENST00000412923.6
ENST00000511115.5 ENST00000344876.9 ENST00000507846.5 ENST00000510305.5 ENST00000611581.1 |
protocadherin 18 |
|
chr13_+_101452629 Show fit | 2.78 |
ENST00000622834.4
ENST00000545560.6 ENST00000376180.8 |
integrin subunit beta like 1 |
|
chr8_+_96584920 Show fit | 2.70 |
ENST00000521590.5
|
syndecan 2 |
|
chr12_-_91178520 Show fit | 2.15 |
ENST00000425043.5
ENST00000420120.6 ENST00000441303.6 ENST00000456569.2 |
decorin |
|
chr13_-_42992165 Show fit | 2.00 |
ENST00000398762.7
ENST00000313640.11 ENST00000313624.12 |
epithelial stromal interaction 1 |
|
chr14_-_91946989 Show fit | 1.93 |
ENST00000556154.5
|
fibulin 5 |
|
chr1_+_155859550 Show fit | 1.85 |
ENST00000368324.5
|
synaptotagmin 11 |
|
chr1_-_85404494 Show fit | 1.65 |
ENST00000633113.1
|
dimethylarginine dimethylaminohydrolase 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 11.2 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.0 | 4.6 | GO:0001578 | microtubule bundle formation(GO:0001578) |
0.2 | 3.3 | GO:0042340 | keratan sulfate catabolic process(GO:0042340) |
0.4 | 2.7 | GO:0008218 | bioluminescence(GO:0008218) |
0.3 | 2.5 | GO:0036371 | protein localization to T-tubule(GO:0036371) |
0.2 | 2.3 | GO:0035457 | cellular response to interferon-alpha(GO:0035457) |
0.0 | 2.3 | GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146) |
0.7 | 2.2 | GO:0045062 | extrathymic T cell selection(GO:0045062) |
0.1 | 2.1 | GO:0098828 | positive regulation of inhibitory postsynaptic potential(GO:0097151) modulation of inhibitory postsynaptic potential(GO:0098828) |
0.2 | 2.0 | GO:1902748 | positive regulation of lens fiber cell differentiation(GO:1902748) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 11.2 | GO:0005589 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.1 | 7.9 | GO:0043202 | lysosomal lumen(GO:0043202) |
0.7 | 4.5 | GO:0097442 | CA3 pyramidal cell dendrite(GO:0097442) |
0.0 | 3.7 | GO:0030017 | sarcomere(GO:0030017) |
0.0 | 3.4 | GO:0031430 | M band(GO:0031430) |
0.0 | 2.3 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 2.2 | GO:0044306 | neuron projection terminus(GO:0044306) |
0.1 | 2.0 | GO:0097342 | ripoptosome(GO:0097342) |
0.2 | 1.9 | GO:0071953 | elastic fiber(GO:0071953) |
0.3 | 1.8 | GO:0048787 | presynaptic active zone membrane(GO:0048787) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.6 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.1 | 4.1 | GO:0002162 | dystroglycan binding(GO:0002162) |
0.0 | 3.7 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.1 | 3.0 | GO:0050699 | WW domain binding(GO:0050699) |
0.9 | 2.7 | GO:0005017 | platelet-derived growth factor-activated receptor activity(GO:0005017) |
0.0 | 2.7 | GO:0030165 | PDZ domain binding(GO:0030165) |
0.0 | 2.6 | GO:0017137 | Rab GTPase binding(GO:0017137) |
0.1 | 2.4 | GO:0097200 | cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:0097200) |
0.0 | 2.4 | GO:0001205 | transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001205) |
0.0 | 2.1 | GO:0030507 | spectrin binding(GO:0030507) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 14.5 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 4.3 | PID LKB1 PATHWAY | LKB1 signaling events |
0.1 | 4.0 | PID SYNDECAN 2 PATHWAY | Syndecan-2-mediated signaling events |
0.1 | 1.9 | SA FAS SIGNALING | The TNF-type receptor Fas induces apoptosis on ligand binding. |
0.0 | 1.9 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 1.7 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.0 | 1.5 | SIG BCR SIGNALING PATHWAY | Members of the BCR signaling pathway |
0.0 | 1.4 | PID AMB2 NEUTROPHILS PATHWAY | amb2 Integrin signaling |
0.0 | 1.3 | PID S1P S1P1 PATHWAY | S1P1 pathway |
0.0 | 1.0 | PID IL1 PATHWAY | IL1-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 10.9 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.3 | 3.3 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.1 | 2.7 | REACTOME HS GAG DEGRADATION | Genes involved in HS-GAG degradation |
0.0 | 2.5 | REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES | Genes involved in Antiviral mechanism by IFN-stimulated genes |
0.0 | 2.3 | REACTOME CROSS PRESENTATION OF SOLUBLE EXOGENOUS ANTIGENS ENDOSOMES | Genes involved in Cross-presentation of soluble exogenous antigens (endosomes) |
0.1 | 2.1 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
0.1 | 1.9 | REACTOME EXTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Extrinsic Pathway for Apoptosis |
0.1 | 1.9 | REACTOME REGULATION OF IFNA SIGNALING | Genes involved in Regulation of IFNA signaling |
0.1 | 1.7 | REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES | Genes involved in Cytosolic sulfonation of small molecules |
0.0 | 1.4 | REACTOME CELL SURFACE INTERACTIONS AT THE VASCULAR WALL | Genes involved in Cell surface interactions at the vascular wall |