Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSG00000103495.14 | MYC associated zinc finger protein | |
ENSG00000162702.8 | zinc finger protein 281 | |
ENSG00000125651.14 | general transcription factor IIF subunit 1 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ZNF281 | hg38_v1_chr1_-_200410052_200410063, hg38_v1_chr1_-_200410001_200410049 | -0.81 | 1.5e-02 | Click! |
GTF2F1 | hg38_v1_chr19_-_6393205_6393218 | 0.62 | 1.0e-01 | Click! |
MAZ | hg38_v1_chr16_+_29807775_29807929 | 0.58 | 1.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chrX_+_153494970 Show fit | 4.38 |
ENST00000331595.9
ENST00000431891.1 |
biglycan |
|
chr5_+_93583212 Show fit | 3.76 |
ENST00000327111.8
|
nuclear receptor subfamily 2 group F member 1 |
|
chr19_-_2015700 Show fit | 3.43 |
ENST00000255608.9
|
BTB domain containing 2 |
|
chrX_-_107775951 Show fit | 3.17 |
ENST00000315660.8
ENST00000372384.6 ENST00000502650.1 ENST00000506724.1 |
TSC22 domain family member 3 |
|
chr17_-_19387170 Show fit | 3.05 |
ENST00000395592.6
ENST00000299610.5 |
microfibril associated protein 4 |
|
chr11_-_111912871 Show fit | 2.93 |
ENST00000528628.5
|
crystallin alpha B |
|
chr3_-_18424533 Show fit | 2.89 |
ENST00000417717.6
|
SATB homeobox 1 |
|
chr11_+_114059755 Show fit | 2.74 |
ENST00000684295.1
|
zinc finger and BTB domain containing 16 |
|
chrX_+_67543973 Show fit | 2.73 |
ENST00000374690.9
|
androgen receptor |
|
chr17_-_19386785 Show fit | 2.69 |
ENST00000497081.6
|
microfibril associated protein 4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 10.5 | GO:0030208 | dermatan sulfate biosynthetic process(GO:0030208) |
0.2 | 8.5 | GO:0045599 | negative regulation of fat cell differentiation(GO:0045599) |
0.5 | 8.2 | GO:0007021 | tubulin complex assembly(GO:0007021) |
0.7 | 8.1 | GO:0048251 | elastic fiber assembly(GO:0048251) |
1.0 | 7.9 | GO:1902748 | positive regulation of lens fiber cell differentiation(GO:1902748) |
0.8 | 7.0 | GO:0070236 | negative regulation of activation-induced cell death of T cells(GO:0070236) |
0.7 | 7.0 | GO:0071492 | cellular response to UV-A(GO:0071492) |
1.0 | 6.1 | GO:0051138 | positive regulation of NK T cell differentiation(GO:0051138) |
1.0 | 5.8 | GO:0060399 | positive regulation of growth hormone receptor signaling pathway(GO:0060399) |
0.2 | 5.0 | GO:0010971 | positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 17.7 | GO:0016605 | PML body(GO:0016605) |
0.1 | 12.5 | GO:0000118 | histone deacetylase complex(GO:0000118) |
0.1 | 12.0 | GO:0044306 | neuron projection terminus(GO:0044306) |
1.1 | 10.0 | GO:0071953 | elastic fiber(GO:0071953) |
0.1 | 9.6 | GO:0090575 | RNA polymerase II transcription factor complex(GO:0090575) |
0.1 | 9.5 | GO:0043202 | lysosomal lumen(GO:0043202) |
0.5 | 8.3 | GO:0097512 | cardiac myofibril(GO:0097512) |
0.5 | 6.0 | GO:0098647 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 5.2 | GO:0032588 | trans-Golgi network membrane(GO:0032588) |
0.0 | 5.2 | GO:0005758 | mitochondrial intermembrane space(GO:0005758) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 25.4 | GO:0003714 | transcription corepressor activity(GO:0003714) |
0.0 | 13.4 | GO:0001077 | transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077) |
0.1 | 9.2 | GO:0004860 | protein kinase inhibitor activity(GO:0004860) |
0.3 | 8.6 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.0 | 8.5 | GO:0043565 | sequence-specific DNA binding(GO:0043565) |
0.1 | 7.9 | GO:0070412 | R-SMAD binding(GO:0070412) |
0.0 | 7.4 | GO:0001227 | transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227) |
0.1 | 7.3 | GO:0004683 | calmodulin-dependent protein kinase activity(GO:0004683) |
0.4 | 6.7 | GO:0001206 | transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001206) |
0.2 | 6.2 | GO:0070742 | C2H2 zinc finger domain binding(GO:0070742) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 15.1 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.1 | 15.0 | NABA CORE MATRISOME | Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans |
0.1 | 7.1 | NABA COLLAGENS | Genes encoding collagen proteins |
0.1 | 7.1 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.1 | 6.8 | SIG PIP3 SIGNALING IN B LYMPHOCYTES | Genes related to PIP3 signaling in B lymphocytes |
0.1 | 5.6 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.1 | 5.0 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.1 | 4.8 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.1 | 4.6 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.1 | 4.5 | ST DIFFERENTIATION PATHWAY IN PC12 CELLS | Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 12.0 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.4 | 11.0 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.1 | 7.9 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.1 | 6.7 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.0 | 6.1 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.2 | 6.0 | REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION | Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression |
0.1 | 5.8 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.1 | 5.7 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.2 | 5.1 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.1 | 4.2 | REACTOME PROSTACYCLIN SIGNALLING THROUGH PROSTACYCLIN RECEPTOR | Genes involved in Prostacyclin signalling through prostacyclin receptor |