Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
MYF6 | hg38_v1_chr12_+_80707625_80707642 | -0.28 | 4.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_56579555 Show fit | 2.02 |
ENST00000371250.4
|
phospholipid phosphatase 3 |
|
chr7_+_100602344 Show fit | 1.53 |
ENST00000223061.6
|
procollagen C-endopeptidase enhancer |
|
chr16_+_53099100 Show fit | 1.47 |
ENST00000565832.5
|
chromodomain helicase DNA binding protein 9 |
|
chr2_+_148021404 Show fit | 1.33 |
ENST00000638043.2
|
methyl-CpG binding domain protein 5 |
|
chr3_+_111071773 Show fit | 1.25 |
ENST00000485303.6
|
nectin cell adhesion molecule 3 |
|
chr10_-_77637902 Show fit | 1.22 |
ENST00000286627.10
ENST00000639486.1 ENST00000640523.1 |
potassium calcium-activated channel subfamily M alpha 1 |
|
chr8_-_23854796 Show fit | 1.13 |
ENST00000290271.7
|
stanniocalcin 1 |
|
chr14_-_59870752 Show fit | 1.10 |
ENST00000611068.1
ENST00000267484.10 |
reticulon 1 |
|
chr2_+_148021083 Show fit | 1.03 |
ENST00000642680.2
|
methyl-CpG binding domain protein 5 |
|
chr8_+_103371490 Show fit | 1.01 |
ENST00000330295.10
ENST00000415886.2 |
collagen triple helix repeat containing 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 3.7 | GO:0034465 | response to carbon monoxide(GO:0034465) |
0.6 | 3.5 | GO:0060399 | positive regulation of growth hormone receptor signaling pathway(GO:0060399) |
0.2 | 2.0 | GO:0008354 | germ cell migration(GO:0008354) |
0.1 | 2.0 | GO:0043567 | regulation of insulin-like growth factor receptor signaling pathway(GO:0043567) |
0.2 | 1.5 | GO:0090210 | regulation of establishment of blood-brain barrier(GO:0090210) |
0.1 | 1.5 | GO:0035826 | rubidium ion transport(GO:0035826) regulation of rubidium ion transport(GO:2000680) |
0.1 | 1.3 | GO:0001886 | endothelial cell morphogenesis(GO:0001886) |
0.1 | 1.3 | GO:1902414 | protein localization to cell junction(GO:1902414) |
0.1 | 1.3 | GO:0070208 | protein heterotrimerization(GO:0070208) |
0.2 | 1.0 | GO:0043932 | ossification involved in bone remodeling(GO:0043932) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.3 | GO:0005901 | caveola(GO:0005901) |
0.1 | 3.2 | GO:0010369 | chromocenter(GO:0010369) |
0.1 | 1.5 | GO:0097487 | multivesicular body, internal vesicle(GO:0097487) |
0.0 | 1.3 | GO:0005581 | collagen trimer(GO:0005581) |
0.1 | 1.0 | GO:0071953 | elastic fiber(GO:0071953) |
0.1 | 0.8 | GO:0034673 | inhibin-betaglycan-ActRII complex(GO:0034673) |
0.1 | 0.8 | GO:0001652 | granular component(GO:0001652) |
0.1 | 0.7 | GO:0042567 | insulin-like growth factor ternary complex(GO:0042567) |
0.1 | 0.7 | GO:0070852 | cell body fiber(GO:0070852) |
0.0 | 0.7 | GO:0097512 | cardiac myofibril(GO:0097512) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 3.7 | GO:0060072 | large conductance calcium-activated potassium channel activity(GO:0060072) |
0.3 | 2.0 | GO:0042392 | sphingosine-1-phosphate phosphatase activity(GO:0042392) |
0.0 | 1.4 | GO:0016504 | peptidase activator activity(GO:0016504) |
0.1 | 1.2 | GO:0045294 | alpha-catenin binding(GO:0045294) |
0.2 | 1.1 | GO:0018479 | benzaldehyde dehydrogenase (NAD+) activity(GO:0018479) |
0.1 | 1.1 | GO:0043237 | laminin-1 binding(GO:0043237) |
0.1 | 1.1 | GO:0048407 | platelet-derived growth factor binding(GO:0048407) |
0.0 | 1.1 | GO:0001102 | RNA polymerase II activating transcription factor binding(GO:0001102) |
0.1 | 1.0 | GO:0044323 | retinoic acid-responsive element binding(GO:0044323) |
0.0 | 0.9 | GO:0005109 | frizzled binding(GO:0005109) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.1 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 1.7 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.0 | 1.5 | PID PTP1B PATHWAY | Signaling events mediated by PTP1B |
0.0 | 1.3 | PID LYMPH ANGIOGENESIS PATHWAY | VEGFR3 signaling in lymphatic endothelium |
0.0 | 0.6 | ST MYOCYTE AD PATHWAY | Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway. |
0.0 | 0.5 | PID SYNDECAN 3 PATHWAY | Syndecan-3-mediated signaling events |
0.0 | 0.4 | PID CXCR4 PATHWAY | CXCR4-mediated signaling events |
0.0 | 0.3 | ST IL 13 PATHWAY | Interleukin 13 (IL-13) Pathway |
0.0 | 0.2 | SA PTEN PATHWAY | PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate. |
0.0 | 0.1 | PID S1P S1P3 PATHWAY | S1P3 pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.7 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 1.6 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.1 | 1.4 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.0 | 1.0 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.0 | 0.7 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.0 | 0.6 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS | Genes involved in Synthesis of bile acids and bile salts |
0.0 | 0.6 | REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS | Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
0.0 | 0.6 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.0 | 0.6 | REACTOME GPVI MEDIATED ACTIVATION CASCADE | Genes involved in GPVI-mediated activation cascade |
0.0 | 0.5 | REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION | Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression |