Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NFATC1 | hg38_v1_chr18_+_79395856_79395939 | -0.61 | 1.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_91946989 Show fit | 2.29 |
ENST00000556154.5
|
fibulin 5 |
|
chr14_-_91947383 Show fit | 2.02 |
ENST00000267620.14
|
fibulin 5 |
|
chr2_+_188974364 Show fit | 1.29 |
ENST00000304636.9
ENST00000317840.9 |
collagen type III alpha 1 chain |
|
chr12_-_91179472 Show fit | 1.06 |
ENST00000550099.5
ENST00000546391.5 |
decorin |
|
chr12_-_91179355 Show fit | 1.03 |
ENST00000550563.5
ENST00000546370.5 |
decorin |
|
chr7_+_100602344 Show fit | 0.68 |
ENST00000223061.6
|
procollagen C-endopeptidase enhancer |
|
chr15_+_32717994 Show fit | 0.64 |
ENST00000560677.5
ENST00000560830.1 ENST00000651154.1 |
gremlin 1, DAN family BMP antagonist |
|
chrX_+_153494970 Show fit | 0.62 |
ENST00000331595.9
ENST00000431891.1 |
biglycan |
|
chr13_-_67230313 Show fit | 0.59 |
ENST00000377865.7
|
protocadherin 9 |
|
chr18_-_28036585 Show fit | 0.59 |
ENST00000399380.7
|
cadherin 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 4.3 | GO:0048251 | elastic fiber assembly(GO:0048251) |
0.1 | 2.9 | GO:0019800 | peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan(GO:0019800) |
0.2 | 1.3 | GO:0060414 | aorta smooth muscle tissue morphogenesis(GO:0060414) |
0.1 | 1.0 | GO:0032625 | interleukin-21 production(GO:0032625) interleukin-21 secretion(GO:0072619) |
0.1 | 0.8 | GO:1900119 | positive regulation of execution phase of apoptosis(GO:1900119) |
0.2 | 0.7 | GO:0097325 | melanocyte proliferation(GO:0097325) |
0.2 | 0.6 | GO:1900154 | regulation of bone trabecula formation(GO:1900154) negative regulation of bone trabecula formation(GO:1900155) |
0.1 | 0.6 | GO:1902897 | regulation of postsynaptic density protein 95 clustering(GO:1902897) |
0.0 | 0.5 | GO:0038063 | collagen-activated tyrosine kinase receptor signaling pathway(GO:0038063) |
0.1 | 0.4 | GO:0098746 | fast, calcium ion-dependent exocytosis of neurotransmitter(GO:0098746) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 4.3 | GO:0071953 | elastic fiber(GO:0071953) |
0.2 | 2.2 | GO:0005589 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 1.4 | GO:0044291 | cell-cell contact zone(GO:0044291) |
0.1 | 1.2 | GO:0005583 | fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643) |
0.0 | 0.7 | GO:0071438 | invadopodium membrane(GO:0071438) |
0.0 | 0.6 | GO:0016342 | catenin complex(GO:0016342) |
0.1 | 0.4 | GO:0060201 | clathrin-sculpted acetylcholine transport vesicle(GO:0060200) clathrin-sculpted acetylcholine transport vesicle membrane(GO:0060201) |
0.0 | 0.4 | GO:0043218 | compact myelin(GO:0043218) |
0.1 | 0.3 | GO:0031673 | H zone(GO:0031673) |
0.0 | 0.3 | GO:0005883 | neurofilament(GO:0005883) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.7 | GO:0005178 | integrin binding(GO:0005178) |
0.0 | 2.9 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.1 | 1.3 | GO:0048407 | platelet-derived growth factor binding(GO:0048407) |
0.0 | 1.2 | GO:0070742 | C2H2 zinc finger domain binding(GO:0070742) |
0.0 | 1.1 | GO:0043621 | protein self-association(GO:0043621) |
0.0 | 0.8 | GO:0042169 | SH2 domain binding(GO:0042169) |
0.0 | 0.7 | GO:0016504 | peptidase activator activity(GO:0016504) |
0.1 | 0.6 | GO:0016015 | morphogen activity(GO:0016015) |
0.0 | 0.6 | GO:0045294 | alpha-catenin binding(GO:0045294) |
0.1 | 0.5 | GO:0038062 | protein tyrosine kinase collagen receptor activity(GO:0038062) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.5 | NABA CORE MATRISOME | Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans |
0.0 | 2.6 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 1.1 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.0 | 1.0 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 0.7 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 0.4 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.9 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 1.7 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 0.6 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 0.5 | REACTOME INSULIN SYNTHESIS AND PROCESSING | Genes involved in Insulin Synthesis and Processing |
0.0 | 0.4 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
0.0 | 0.4 | REACTOME DCC MEDIATED ATTRACTIVE SIGNALING | Genes involved in DCC mediated attractive signaling |
0.0 | 0.3 | REACTOME HYALURONAN METABOLISM | Genes involved in Hyaluronan metabolism |
0.0 | 0.2 | REACTOME GLUTAMATE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Glutamate Neurotransmitter Release Cycle |