Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NFATC2 | hg38_v1_chr20_-_51562829_51562853 | -0.70 | 5.1e-02 | Click! |
NFATC3 | hg38_v1_chr16_+_68085861_68085968 | 0.34 | 4.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr18_+_31447732 Show fit | 1.09 |
ENST00000257189.5
|
desmoglein 3 |
|
chr20_+_59604527 Show fit | 0.66 |
ENST00000371015.6
|
phosphatase and actin regulator 3 |
|
chr7_-_41703062 Show fit | 0.63 |
ENST00000242208.5
|
inhibin subunit beta A |
|
chr5_+_140875299 Show fit | 0.58 |
ENST00000613593.1
ENST00000398631.3 |
protocadherin alpha 12 |
|
chr6_-_136466858 Show fit | 0.54 |
ENST00000544465.5
|
microtubule associated protein 7 |
|
chr10_-_114684612 Show fit | 0.53 |
ENST00000533213.6
ENST00000369252.8 |
actin binding LIM protein 1 |
|
chr1_+_43935807 Show fit | 0.51 |
ENST00000438616.3
|
artemin |
|
chr5_+_140841183 Show fit | 0.50 |
ENST00000378123.4
ENST00000531613.2 |
protocadherin alpha 8 |
|
chr5_+_140827950 Show fit | 0.49 |
ENST00000378126.4
ENST00000529310.6 ENST00000527624.1 |
protocadherin alpha 6 |
|
chr5_+_140848360 Show fit | 0.48 |
ENST00000532602.2
|
protocadherin alpha 9 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.1 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
0.3 | 0.9 | GO:0033082 | regulation of extrathymic T cell differentiation(GO:0033082) sebum secreting cell proliferation(GO:1990654) |
0.2 | 0.8 | GO:0097021 | lymphocyte migration into lymphoid organs(GO:0097021) |
0.1 | 0.7 | GO:0032782 | bile acid secretion(GO:0032782) |
0.0 | 0.7 | GO:0015695 | organic cation transport(GO:0015695) |
0.2 | 0.6 | GO:0060279 | positive regulation of ovulation(GO:0060279) |
0.1 | 0.4 | GO:0035627 | ceramide transport(GO:0035627) |
0.1 | 0.4 | GO:0032439 | endosome localization(GO:0032439) |
0.0 | 0.4 | GO:1904352 | positive regulation of protein catabolic process in the vacuole(GO:1904352) |
0.0 | 0.4 | GO:0048672 | positive regulation of collateral sprouting(GO:0048672) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | GO:0030057 | desmosome(GO:0030057) |
0.0 | 0.7 | GO:0046581 | intercellular canaliculus(GO:0046581) |
0.2 | 0.6 | GO:0043512 | inhibin complex(GO:0043511) inhibin A complex(GO:0043512) |
0.0 | 0.5 | GO:0045179 | apical cortex(GO:0045179) |
0.1 | 0.4 | GO:0097209 | epidermal lamellar body(GO:0097209) |
0.0 | 0.4 | GO:0032585 | multivesicular body membrane(GO:0032585) |
0.0 | 0.3 | GO:0016012 | sarcoglycan complex(GO:0016012) |
0.0 | 0.3 | GO:0032039 | integrator complex(GO:0032039) |
0.0 | 0.3 | GO:1990454 | L-type voltage-gated calcium channel complex(GO:1990454) |
0.1 | 0.2 | GO:0071754 | dimeric IgA immunoglobulin complex(GO:0071750) secretory dimeric IgA immunoglobulin complex(GO:0071752) IgM immunoglobulin complex(GO:0071753) IgM immunoglobulin complex, circulating(GO:0071754) pentameric IgM immunoglobulin complex(GO:0071756) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.1 | GO:0001011 | transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087) |
0.0 | 0.9 | GO:1990841 | promoter-specific chromatin binding(GO:1990841) |
0.1 | 0.6 | GO:0016524 | latrotoxin receptor activity(GO:0016524) |
0.1 | 0.6 | GO:0070699 | type II activin receptor binding(GO:0070699) |
0.1 | 0.6 | GO:0019534 | toxin transporter activity(GO:0019534) |
0.0 | 0.6 | GO:0008157 | protein phosphatase 1 binding(GO:0008157) |
0.1 | 0.4 | GO:0034040 | lipid-transporting ATPase activity(GO:0034040) |
0.0 | 0.4 | GO:0019841 | retinol binding(GO:0019841) |
0.0 | 0.4 | GO:0032452 | histone demethylase activity(GO:0032452) |
0.1 | 0.3 | GO:0004031 | aldehyde oxidase activity(GO:0004031) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.7 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.0 | 0.6 | PID ALK1 PATHWAY | ALK1 signaling events |
0.0 | 0.2 | PID PS1 PATHWAY | Presenilin action in Notch and Wnt signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |
0.0 | 1.0 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.0 | 1.0 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
0.0 | 0.7 | REACTOME DCC MEDIATED ATTRACTIVE SIGNALING | Genes involved in DCC mediated attractive signaling |
0.1 | 0.6 | REACTOME GLYCOPROTEIN HORMONES | Genes involved in Glycoprotein hormones |
0.0 | 0.5 | REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS | Genes involved in ABCA transporters in lipid homeostasis |
0.0 | 0.4 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
0.0 | 0.3 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |
0.0 | 0.2 | REACTOME THE NLRP3 INFLAMMASOME | Genes involved in The NLRP3 inflammasome |
0.0 | 0.2 | REACTOME SIGNALING BY NOTCH3 | Genes involved in Signaling by NOTCH3 |