Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NFATC4 | hg38_v1_chr14_+_24368020_24368341 | 0.32 | 4.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_91946989 Show fit | 6.08 |
ENST00000556154.5
|
fibulin 5 |
|
chr14_-_91947383 Show fit | 3.72 |
ENST00000267620.14
|
fibulin 5 |
|
chr13_+_101452629 Show fit | 3.24 |
ENST00000622834.4
ENST00000545560.6 ENST00000376180.8 |
integrin subunit beta like 1 |
|
chr1_-_56579555 Show fit | 2.36 |
ENST00000371250.4
|
phospholipid phosphatase 3 |
|
chr1_+_163068775 Show fit | 2.32 |
ENST00000421743.6
|
regulator of G protein signaling 4 |
|
chr2_+_109129199 Show fit | 2.06 |
ENST00000309415.8
|
SH3 domain containing ring finger 3 |
|
chr2_+_188974364 Show fit | 1.97 |
ENST00000304636.9
ENST00000317840.9 |
collagen type III alpha 1 chain |
|
chr5_-_173328407 Show fit | 1.80 |
ENST00000265087.9
|
stanniocalcin 2 |
|
chr2_+_151357583 Show fit | 1.74 |
ENST00000243347.5
|
TNF alpha induced protein 6 |
|
chr2_-_237414127 Show fit | 1.61 |
ENST00000472056.5
|
collagen type VI alpha 3 chain |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 9.8 | GO:0048251 | elastic fiber assembly(GO:0048251) |
0.0 | 3.0 | GO:0030574 | collagen catabolic process(GO:0030574) |
0.2 | 2.4 | GO:0008354 | germ cell migration(GO:0008354) |
0.1 | 2.3 | GO:0009812 | flavonoid metabolic process(GO:0009812) |
0.0 | 2.3 | GO:0000188 | inactivation of MAPK activity(GO:0000188) |
0.0 | 2.2 | GO:0000413 | protein peptidyl-prolyl isomerization(GO:0000413) |
0.3 | 1.9 | GO:0060414 | aorta smooth muscle tissue morphogenesis(GO:0060414) |
0.2 | 1.9 | GO:1902897 | regulation of postsynaptic density protein 95 clustering(GO:1902897) |
0.1 | 1.8 | GO:2001256 | regulation of store-operated calcium entry(GO:2001256) |
0.1 | 1.8 | GO:0030728 | ovulation(GO:0030728) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 10.0 | GO:0071953 | elastic fiber(GO:0071953) |
0.2 | 3.1 | GO:0005589 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.1 | 2.0 | GO:0098643 | fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643) |
0.0 | 1.9 | GO:1904724 | tertiary granule lumen(GO:1904724) |
0.0 | 1.9 | GO:0005902 | microvillus(GO:0005902) |
0.0 | 1.5 | GO:0005901 | caveola(GO:0005901) |
0.0 | 1.3 | GO:0005811 | lipid particle(GO:0005811) |
0.1 | 1.2 | GO:0097443 | sorting endosome(GO:0097443) |
0.0 | 1.2 | GO:0043218 | compact myelin(GO:0043218) |
0.0 | 1.2 | GO:0008023 | transcription elongation factor complex(GO:0008023) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 12.2 | GO:0005178 | integrin binding(GO:0005178) |
0.0 | 3.1 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.8 | 2.4 | GO:0005017 | platelet-derived growth factor-activated receptor activity(GO:0005017) |
0.4 | 2.4 | GO:0042392 | sphingosine-1-phosphate phosphatase activity(GO:0042392) |
0.1 | 2.3 | GO:0004062 | aryl sulfotransferase activity(GO:0004062) |
0.1 | 2.3 | GO:0001965 | G-protein alpha-subunit binding(GO:0001965) |
0.2 | 2.0 | GO:0048407 | platelet-derived growth factor binding(GO:0048407) |
0.1 | 2.0 | GO:0005528 | macrolide binding(GO:0005527) FK506 binding(GO:0005528) |
0.0 | 1.8 | GO:0005540 | hyaluronic acid binding(GO:0005540) |
0.0 | 1.7 | GO:0020037 | heme binding(GO:0020037) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 11.3 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 5.1 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 1.9 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.0 | 1.5 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.0 | 1.4 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 1.4 | PID LYSOPHOSPHOLIPID PATHWAY | LPA receptor mediated events |
0.0 | 1.3 | PID S1P S1P3 PATHWAY | S1P3 pathway |
0.0 | 1.1 | SA FAS SIGNALING | The TNF-type receptor Fas induces apoptosis on ligand binding. |
0.0 | 1.1 | PID IL6 7 PATHWAY | IL6-mediated signaling events |
0.0 | 1.1 | PID PS1 PATHWAY | Presenilin action in Notch and Wnt signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.1 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 3.8 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.0 | 2.6 | REACTOME G ALPHA Z SIGNALLING EVENTS | Genes involved in G alpha (z) signalling events |
0.0 | 2.6 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
0.1 | 2.3 | REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES | Genes involved in Cytosolic sulfonation of small molecules |
0.0 | 1.3 | REACTOME ERK MAPK TARGETS | Genes involved in ERK/MAPK targets |
0.1 | 1.2 | REACTOME SEMA3A PLEXIN REPULSION SIGNALING BY INHIBITING INTEGRIN ADHESION | Genes involved in SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion |
0.0 | 1.1 | REACTOME EXTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Extrinsic Pathway for Apoptosis |
0.0 | 1.0 | REACTOME NOTCH HLH TRANSCRIPTION PATHWAY | Genes involved in Notch-HLH transcription pathway |
0.0 | 1.0 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |