Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NFIB | hg38_v1_chr9_-_14300231_14300269 | -0.46 | 2.5e-01 | Click! |
NFIX | hg38_v1_chr19_+_13024573_13024621 | 0.37 | 3.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_+_45026296 Show fit | 1.78 |
ENST00000296130.5
|
C-type lectin domain family 3 member B |
|
chr12_-_14885845 Show fit | 1.40 |
ENST00000539261.6
ENST00000228938.5 |
matrix Gla protein |
|
chr16_+_2830295 Show fit | 1.35 |
ENST00000571723.1
|
zymogen granule protein 16B |
|
chr16_+_2830179 Show fit | 1.24 |
ENST00000570670.5
|
zymogen granule protein 16B |
|
chr20_-_35438218 Show fit | 1.12 |
ENST00000374369.8
|
growth differentiation factor 5 |
|
chr17_-_5500997 Show fit | 1.12 |
ENST00000568641.2
|
novel protein |
|
chr5_+_176810498 Show fit | 1.02 |
ENST00000509580.2
|
unc-5 netrin receptor A |
|
chr22_+_24594781 Show fit | 1.01 |
ENST00000456869.5
ENST00000411974.5 |
gamma-glutamyltransferase 1 |
|
chr16_+_2830155 Show fit | 1.01 |
ENST00000382280.7
|
zymogen granule protein 16B |
|
chr9_-_76906090 Show fit | 0.97 |
ENST00000376718.8
|
prune homolog 2 with BCH domain |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.9 | GO:0001895 | retina homeostasis(GO:0001895) |
0.2 | 2.4 | GO:0010756 | positive regulation of plasminogen activation(GO:0010756) |
0.0 | 2.0 | GO:0070306 | lens fiber cell differentiation(GO:0070306) |
0.2 | 1.8 | GO:0089700 | protein kinase D signaling(GO:0089700) |
0.2 | 1.6 | GO:0033564 | anterior/posterior axon guidance(GO:0033564) |
0.2 | 1.5 | GO:0061364 | apoptotic process involved in luteolysis(GO:0061364) |
0.1 | 1.5 | GO:2001300 | lipoxin metabolic process(GO:2001300) |
0.1 | 1.5 | GO:0030205 | dermatan sulfate metabolic process(GO:0030205) |
0.1 | 1.4 | GO:0097151 | positive regulation of inhibitory postsynaptic potential(GO:0097151) modulation of inhibitory postsynaptic potential(GO:0098828) |
0.2 | 1.3 | GO:0043932 | ossification involved in bone remodeling(GO:0043932) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.4 | GO:0005796 | Golgi lumen(GO:0005796) |
0.1 | 2.8 | GO:0044298 | neuronal cell body membrane(GO:0032809) cell body membrane(GO:0044298) |
0.4 | 2.5 | GO:0001652 | granular component(GO:0001652) |
0.0 | 1.9 | GO:0000421 | autophagosome membrane(GO:0000421) |
0.0 | 1.9 | GO:0031526 | brush border membrane(GO:0031526) |
0.0 | 1.6 | GO:0034364 | high-density lipoprotein particle(GO:0034364) |
0.0 | 1.6 | GO:0030964 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.0 | 1.3 | GO:0048786 | presynaptic active zone(GO:0048786) |
0.1 | 1.2 | GO:0005589 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 1.2 | GO:1904724 | tertiary granule lumen(GO:1904724) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.6 | GO:0030246 | carbohydrate binding(GO:0030246) |
0.0 | 2.4 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.0 | 2.0 | GO:0005518 | collagen binding(GO:0005518) |
0.3 | 1.9 | GO:0004499 | N,N-dimethylaniline monooxygenase activity(GO:0004499) |
0.0 | 1.7 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.1 | 1.5 | GO:0004697 | protein kinase C activity(GO:0004697) |
0.3 | 1.4 | GO:0016404 | 15-hydroxyprostaglandin dehydrogenase (NAD+) activity(GO:0016404) |
0.2 | 1.4 | GO:0048495 | Roundabout binding(GO:0048495) |
0.1 | 1.3 | GO:0048407 | platelet-derived growth factor binding(GO:0048407) |
0.1 | 1.3 | GO:0036374 | glutathione hydrolase activity(GO:0036374) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 3.8 | PID INTEGRIN1 PATHWAY | Beta1 integrin cell surface interactions |
0.0 | 3.1 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 2.3 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 1.3 | PID NETRIN PATHWAY | Netrin-mediated signaling events |
0.1 | 1.2 | ST STAT3 PATHWAY | STAT3 Pathway |
0.0 | 1.2 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.0 | 1.2 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 1.2 | ST GA13 PATHWAY | G alpha 13 Pathway |
0.0 | 1.2 | PID LKB1 PATHWAY | LKB1 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.2 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.0 | 2.2 | REACTOME A TETRASACCHARIDE LINKER SEQUENCE IS REQUIRED FOR GAG SYNTHESIS | Genes involved in A tetrasaccharide linker sequence is required for GAG synthesis |
0.1 | 1.8 | REACTOME ROLE OF DCC IN REGULATING APOPTOSIS | Genes involved in Role of DCC in regulating apoptosis |
0.1 | 1.8 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
0.0 | 1.8 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.0 | 1.4 | REACTOME IRON UPTAKE AND TRANSPORT | Genes involved in Iron uptake and transport |
0.0 | 1.4 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.0 | 1.4 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.0 | 1.3 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.0 | 1.2 | REACTOME NETRIN1 SIGNALING | Genes involved in Netrin-1 signaling |