Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NKX2-3 | hg38_v1_chr10_+_99532927_99532953 | 0.45 | 2.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_+_140834230 Show fit | 0.65 |
ENST00000356878.5
ENST00000525929.2 |
protocadherin alpha 7 |
|
chr4_-_36244438 Show fit | 0.48 |
ENST00000303965.9
|
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 |
|
chr1_+_34755039 Show fit | 0.48 |
ENST00000338513.1
|
gap junction protein beta 5 |
|
chr20_+_59835853 Show fit | 0.47 |
ENST00000492611.5
|
phosphatase and actin regulator 3 |
|
chr5_+_36608146 Show fit | 0.46 |
ENST00000381918.4
ENST00000513646.1 |
solute carrier family 1 member 3 |
|
chr3_-_111595339 Show fit | 0.44 |
ENST00000317012.5
|
zinc finger BED-type containing 2 |
|
chr19_+_35106510 Show fit | 0.39 |
ENST00000648240.1
|
novel protein |
|
chr2_-_162318129 Show fit | 0.38 |
ENST00000679938.1
|
interferon induced with helicase C domain 1 |
|
chr4_-_89837106 Show fit | 0.38 |
ENST00000394986.5
ENST00000394991.8 ENST00000506244.5 ENST00000394989.6 ENST00000673902.1 ENST00000674129.1 |
synuclein alpha |
|
chr4_-_89836213 Show fit | 0.37 |
ENST00000618500.4
ENST00000508895.5 |
synuclein alpha |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.4 | GO:2000470 | negative regulation of dopamine uptake involved in synaptic transmission(GO:0051585) norepinephrine uptake(GO:0051620) regulation of norepinephrine uptake(GO:0051621) negative regulation of norepinephrine uptake(GO:0051622) negative regulation of catecholamine uptake involved in synaptic transmission(GO:0051945) regulation of glutathione peroxidase activity(GO:1903282) positive regulation of glutathione peroxidase activity(GO:1903284) positive regulation of hydrogen peroxide catabolic process(GO:1903285) positive regulation of peroxidase activity(GO:2000470) |
0.1 | 1.0 | GO:0006069 | ethanol oxidation(GO:0006069) |
0.1 | 0.7 | GO:0036371 | protein localization to T-tubule(GO:0036371) |
0.1 | 0.5 | GO:0060708 | spongiotrophoblast differentiation(GO:0060708) |
0.0 | 0.5 | GO:0009449 | glutamate biosynthetic process(GO:0006537) gamma-aminobutyric acid biosynthetic process(GO:0009449) |
0.0 | 0.5 | GO:0031642 | negative regulation of myelination(GO:0031642) |
0.1 | 0.4 | GO:0034343 | type III interferon production(GO:0034343) regulation of type III interferon production(GO:0034344) |
0.1 | 0.3 | GO:2000646 | positive regulation of receptor catabolic process(GO:2000646) |
0.1 | 0.3 | GO:0090362 | positive regulation of platelet-derived growth factor production(GO:0090362) |
0.0 | 0.3 | GO:0042340 | keratan sulfate catabolic process(GO:0042340) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.5 | GO:0031092 | platelet alpha granule membrane(GO:0031092) |
0.0 | 1.0 | GO:0043034 | costamere(GO:0043034) |
0.0 | 0.5 | GO:0005922 | connexon complex(GO:0005922) |
0.1 | 0.3 | GO:0034365 | discoidal high-density lipoprotein particle(GO:0034365) |
0.0 | 0.3 | GO:0045277 | respiratory chain complex IV(GO:0045277) |
0.0 | 0.2 | GO:1990712 | HFE-transferrin receptor complex(GO:1990712) |
0.0 | 0.2 | GO:0043020 | NADPH oxidase complex(GO:0043020) |
0.0 | 0.1 | GO:0005594 | collagen type IX trimer(GO:0005594) |
0.0 | 0.1 | GO:0042720 | mitochondrial inner membrane peptidase complex(GO:0042720) |
0.0 | 0.1 | GO:0005927 | muscle tendon junction(GO:0005927) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.4 | GO:0060961 | phospholipase D inhibitor activity(GO:0060961) |
0.1 | 1.0 | GO:0004024 | alcohol dehydrogenase activity, zinc-dependent(GO:0004024) |
0.0 | 0.8 | GO:0004864 | protein phosphatase inhibitor activity(GO:0004864) |
0.0 | 0.7 | GO:0030507 | spectrin binding(GO:0030507) |
0.0 | 0.5 | GO:0015501 | glutamate:sodium symporter activity(GO:0015501) |
0.0 | 0.5 | GO:0034237 | protein kinase A regulatory subunit binding(GO:0034237) |
0.1 | 0.3 | GO:0070326 | very-low-density lipoprotein particle receptor binding(GO:0070326) |
0.1 | 0.2 | GO:0052798 | beta-galactoside alpha-2,3-sialyltransferase activity(GO:0052798) |
0.0 | 0.2 | GO:0005166 | neurotrophin p75 receptor binding(GO:0005166) |
0.0 | 0.2 | GO:0046899 | nucleoside triphosphate adenylate kinase activity(GO:0046899) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.5 | PID ALPHA SYNUCLEIN PATHWAY | Alpha-synuclein signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.4 | REACTOME AMYLOIDS | Genes involved in Amyloids |
0.1 | 1.0 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |
0.0 | 0.5 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.0 | 0.3 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.0 | 0.3 | REACTOME NFKB ACTIVATION THROUGH FADD RIP1 PATHWAY MEDIATED BY CASPASE 8 AND10 | Genes involved in NF-kB activation through FADD/RIP-1 pathway mediated by caspase-8 and -10 |
0.0 | 0.3 | REACTOME HDL MEDIATED LIPID TRANSPORT | Genes involved in HDL-mediated lipid transport |
0.0 | 0.3 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |